RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 KCNC4Q03721 635 aa12.61□□□□□ -0.39
RPRD1A-205ENST00000587563 LAPTM4AQ15012 233 aa12.61□□□□□ -0.39
RPRD1A-205ENST00000587563 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
RPRD1A-205ENST00000587563 BCAMP50895 628 aa12.59□□□□□ -0.39
RPRD1A-205ENST00000587563 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
RPRD1A-205ENST00000587563 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
RPRD1A-205ENST00000587563 PHF14O94880 888 aa12.58□□□□□ -0.4
RPRD1A-205ENST00000587563 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
RPRD1A-205ENST00000587563 MFSD10Q14728 455 aa12.56□□□□□ -0.4
RPRD1A-205ENST00000587563 COL9A1P20849 921 aa12.55□□□□□ -0.4
RPRD1A-205ENST00000587563 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
RPRD1A-205ENST00000587563 WBP1LQ9NX94 342 aa12.52□□□□□ -0.41
RPRD1A-205ENST00000587563 EPAS1Q99814 870 aa12.51□□□□□ -0.41
RPRD1A-205ENST00000587563 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
RPRD1A-205ENST00000587563 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
RPRD1A-205ENST00000587563 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
RPRD1A-205ENST00000587563 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-205ENST00000587563 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
RPRD1A-205ENST00000587563 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
RPRD1A-205ENST00000587563 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
RPRD1A-205ENST00000587563 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
RPRD1A-205ENST00000587563 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
RPRD1A-205ENST00000587563 HPS5Q9UPZ3 1129 aa12.43□□□□□ -0.42
RPRD1A-205ENST00000587563 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
RPRD1A-205ENST00000587563 GFRA3O60609 400 aa12.41□□□□□ -0.42
RPRD1A-205ENST00000587563 PPP4CP60510 307 aa12.37□□□□□ -0.43
RPRD1A-205ENST00000587563 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
RPRD1A-205ENST00000587563 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
RPRD1A-205ENST00000587563 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.44
RPRD1A-205ENST00000587563 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
RPRD1A-205ENST00000587563 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
RPRD1A-205ENST00000587563 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
RPRD1A-205ENST00000587563 DPYSL4O14531 572 aa12.3□□□□□ -0.44
RPRD1A-205ENST00000587563 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
RPRD1A-205ENST00000587563 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
RPRD1A-205ENST00000587563 LCE2BO14633 110 aa12.27□□□□□ -0.45
RPRD1A-205ENST00000587563 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
RPRD1A-205ENST00000587563 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
RPRD1A-205ENST00000587563 MAP3K7O43318 606 aa12.25□□□□□ -0.45
RPRD1A-205ENST00000587563 DDX12PQ92771 950 aa12.25□□□□□ -0.45
RPRD1A-205ENST00000587563 CERKQ8TCT0 537 aa12.24□□□□□ -0.45
RPRD1A-205ENST00000587563 NBR1Q14596 966 aa12.23□□□□□ -0.45
RPRD1A-205ENST00000587563 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
RPRD1A-205ENST00000587563 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
RPRD1A-205ENST00000587563 PPP1R18Q6NYC8 613 aa12.22□□□□□ -0.45
RPRD1A-205ENST00000587563 MTRQ99707 1265 aa12.22□□□□□ -0.45
RPRD1A-205ENST00000587563 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-205ENST00000587563 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
RPRD1A-205ENST00000587563 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-205ENST00000587563 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
RPRD1A-205ENST00000587563 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
RPRD1A-205ENST00000587563 GGCXP38435 758 aa12.19□□□□□ -0.46
RPRD1A-205ENST00000587563 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
RPRD1A-205ENST00000587563 PRSS12P56730 875 aa12.18□□□□□ -0.46
RPRD1A-205ENST00000587563 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
RPRD1A-205ENST00000587563 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
RPRD1A-205ENST00000587563 PDIA6Q15084 440 aa12.16□□□□□ -0.46
RPRD1A-205ENST00000587563 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
RPRD1A-205ENST00000587563 SMAPO00193 183 aa12.14□□□□□ -0.47
RPRD1A-205ENST00000587563 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
RPRD1A-205ENST00000587563 TATDN2Q93075 761 aa12.14□□□□□ -0.47
RPRD1A-205ENST00000587563 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
RPRD1A-205ENST00000587563 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
RPRD1A-205ENST00000587563 RNF40O75150 1001 aa12.1□□□□□ -0.47
RPRD1A-205ENST00000587563 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
RPRD1A-205ENST00000587563 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
RPRD1A-205ENST00000587563 SLC4A3P48751 1232 aa12.07□□□□□ -0.48
RPRD1A-205ENST00000587563 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
RPRD1A-205ENST00000587563 APLP1P51693 650 aa12.06□□□□□ -0.48
RPRD1A-205ENST00000587563 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
RPRD1A-205ENST00000587563 NUDT18Q6ZVK8 323 aa12.04□□□□□ -0.48
RPRD1A-205ENST00000587563 ZNF775Q96BV0 537 aaPredicted RBP12.03□□□□□ -0.48
RPRD1A-205ENST00000587563 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
RPRD1A-205ENST00000587563 NKX2-3Q8TAU0 364 aa12.01□□□□□ -0.49
RPRD1A-205ENST00000587563 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
RPRD1A-205ENST00000587563 COPS2P61201 443 aa11.99□□□□□ -0.49
RPRD1A-205ENST00000587563 C3orf80F5H4A9 247 aa11.98□□□□□ -0.49
RPRD1A-205ENST00000587563 ZPR1O75312 459 aa11.98□□□□□ -0.49
RPRD1A-205ENST00000587563 PKDCCQ504Y2 493 aa11.97□□□□□ -0.49
RPRD1A-205ENST00000587563 ARIH1Q9Y4X5 557 aaPredicted RBP11.97□□□□□ -0.49
RPRD1A-205ENST00000587563 E2F4Q16254 413 aa11.96□□□□□ -0.49
RPRD1A-205ENST00000587563 DGAT1O75907 488 aa11.95□□□□□ -0.5
RPRD1A-205ENST00000587563 SLC19A1P41440 591 aa11.95□□□□□ -0.5
RPRD1A-205ENST00000587563 SWT1Q5T5J6 900 aaKnown RBP11.95□□□□□ -0.5
RPRD1A-205ENST00000587563 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
RPRD1A-205ENST00000587563 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
RPRD1A-205ENST00000587563 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
RPRD1A-205ENST00000587563 OSBPP22059 807 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 PRR20EP86478 221 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 PRR20CP86479 221 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 PRR20DP86480 221 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 PRR20BP86481 221 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 PRR20AP86496 221 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 CDHR5Q9HBB8 845 aa11.91□□□□□ -0.5
RPRD1A-205ENST00000587563 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
RPRD1A-205ENST00000587563 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
RPRD1A-205ENST00000587563 ZNF598Q86UK7 904 aaKnown RBP11.89□□□□□ -0.51
RPRD1A-205ENST00000587563 MYT1Q01538 1121 aa11.88□□□□□ -0.51
RPRD1A-205ENST00000587563 SPRYD7Q5W111 196 aa11.88□□□□□ -0.51
RPRD1A-205ENST00000587563 ANKLE1Q8NAG6 615 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms