RNA–Protein interactions for RNA: ENST00000578718.1

KPNB1-206, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-206ENST00000578718 LHX6Q9UPM6 363 aa7.98□□□□□ -1.13
KPNB1-206ENST00000578718 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
KPNB1-206ENST00000578718 NEUROD2Q15784 382 aa7.97□□□□□ -1.13
KPNB1-206ENST00000578718 CDHR5Q9HBB8 845 aa7.97□□□□□ -1.13
KPNB1-206ENST00000578718 IRF6O14896 467 aa7.96□□□□□ -1.14
KPNB1-206ENST00000578718 TSR1Q2NL82 804 aaKnown RBP7.96□□□□□ -1.14
KPNB1-206ENST00000578718 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
KPNB1-206ENST00000578718 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
KPNB1-206ENST00000578718 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
KPNB1-206ENST00000578718 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
KPNB1-206ENST00000578718 RBM27Q9P2N5 1060 aaKnown RBP7.95□□□□□ -1.14
KPNB1-206ENST00000578718 TRIM66O15016 1216 aa7.94□□□□□ -1.14
KPNB1-206ENST00000578718 BCL2L12Q9HB09 334 aa7.94□□□□□ -1.14
KPNB1-206ENST00000578718 FECHP22830 423 aa7.92□□□□□ -1.14
KPNB1-206ENST00000578718 PTPREP23469 700 aa7.92□□□□□ -1.14
KPNB1-206ENST00000578718 PDE4DQ08499 809 aa7.92□□□□□ -1.14
KPNB1-206ENST00000578718 TMEM132AQ24JP5 1023 aa7.92□□□□□ -1.14
KPNB1-206ENST00000578718 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
KPNB1-206ENST00000578718 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
KPNB1-206ENST00000578718 PPP1R3GB7ZBB8 358 aa7.9□□□□□ -1.14
KPNB1-206ENST00000578718 AMHR2Q16671 573 aa7.9□□□□□ -1.14
KPNB1-206ENST00000578718 OATP04181 439 aa7.88□□□□□ -1.15
KPNB1-206ENST00000578718 PRSS12P56730 875 aa7.88□□□□□ -1.15
KPNB1-206ENST00000578718 PADI6Q6TGC4 694 aa7.88□□□□□ -1.15
KPNB1-206ENST00000578718 ERBB3P21860 1342 aa7.87□□□□□ -1.15
KPNB1-206ENST00000578718 TTC13Q8NBP0 860 aa7.87□□□□□ -1.15
KPNB1-206ENST00000578718 FAM163AQ96GL9 167 aaPredicted RBP7.87□□□□□ -1.15
KPNB1-206ENST00000578718 CDCA7LQ96GN5 454 aa7.87□□□□□ -1.15
KPNB1-206ENST00000578718 ST18O60284 1047 aa7.86□□□□□ -1.15
KPNB1-206ENST00000578718 EMP3P54852 163 aa7.86□□□□□ -1.15
KPNB1-206ENST00000578718 TTLL12Q14166 644 aaPredicted RBP7.86□□□□□ -1.15
KPNB1-206ENST00000578718 KDM4CQ9H3R0 1056 aa7.86□□□□□ -1.15
KPNB1-206ENST00000578718 GPBP1L1Q9HC44 474 aaPredicted RBP7.86□□□□□ -1.15
KPNB1-206ENST00000578718 ADGRG1Q9Y653 693 aa7.85□□□□□ -1.15
KPNB1-206ENST00000578718 COL9A1P20849 921 aa7.84□□□□□ -1.15
KPNB1-206ENST00000578718 CLCN1P35523 988 aa7.84□□□□□ -1.15
KPNB1-206ENST00000578718 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
KPNB1-206ENST00000578718 PARP9Q8IXQ6 854 aa7.84□□□□□ -1.15
KPNB1-206ENST00000578718 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
KPNB1-206ENST00000578718 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
KPNB1-206ENST00000578718 PBX2P40425 430 aa7.83□□□□□ -1.16
KPNB1-206ENST00000578718 METTL3Q86U44 580 aaKnown RBP7.83□□□□□ -1.16
KPNB1-206ENST00000578718 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
KPNB1-206ENST00000578718 TRIM6-TRIM34B2RNG4 842 aa7.82□□□□□ -1.16
KPNB1-206ENST00000578718 ONECUT3O60422 494 aaPredicted RBP7.82□□□□□ -1.16
KPNB1-206ENST00000578718 PXYLP1Q8TE99 480 aa7.82□□□□□ -1.16
KPNB1-206ENST00000578718 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
KPNB1-206ENST00000578718 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
KPNB1-206ENST00000578718 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
KPNB1-206ENST00000578718 GPCPD1Q9NPB8 672 aa7.81□□□□□ -1.16
KPNB1-206ENST00000578718 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
KPNB1-206ENST00000578718 MARVELD3Q96A59 401 aa7.8□□□□□ -1.16
KPNB1-206ENST00000578718 TSKSQ9UJT2 592 aa7.8□□□□□ -1.16
KPNB1-206ENST00000578718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
KPNB1-206ENST00000578718 FAM205CA6NFA0 338 aa7.79□□□□□ -1.16
KPNB1-206ENST00000578718 MDM2Q00987 491 aaPredicted RBP7.79□□□□□ -1.16
KPNB1-206ENST00000578718 FAM161AQ3B820 660 aa7.79□□□□□ -1.16
KPNB1-206ENST00000578718 SLC4A5Q9BY07 1137 aa7.79□□□□□ -1.16
KPNB1-206ENST00000578718 ZNF687Q8N1G0 1237 aa7.78□□□□□ -1.16
KPNB1-206ENST00000578718 PHOX2BQ99453 314 aa7.78□□□□□ -1.16
KPNB1-206ENST00000578718 ZBED2Q9BTP6 218 aa7.78□□□□□ -1.16
KPNB1-206ENST00000578718 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
KPNB1-206ENST00000578718 FAM198AQ9UFP1 575 aa7.78□□□□□ -1.16
KPNB1-206ENST00000578718 PSEN2P49810 448 aa7.77□□□□□ -1.17
KPNB1-206ENST00000578718 PNMA3Q9UL41 463 aa7.77□□□□□ -1.17
KPNB1-206ENST00000578718 DNAJB2P25686 324 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 PROX2Q3B8N5 592 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 NUDT18Q6ZVK8 323 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 IL27Q8NEV9 243 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 TATDN2Q93075 761 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 EYA1Q99502 592 aa7.76□□□□□ -1.17
KPNB1-206ENST00000578718 RCCD1A6NED2 376 aa7.75□□□□□ -1.17
KPNB1-206ENST00000578718 HS3ST6Q96QI5 342 aa7.75□□□□□ -1.17
KPNB1-206ENST00000578718 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
KPNB1-206ENST00000578718 RABGEF1Q9UJ41 708 aa7.75□□□□□ -1.17
KPNB1-206ENST00000578718 POTEMA6NI47 508 aa7.74□□□□□ -1.17
KPNB1-206ENST00000578718 REPIN1Q9BWE0 567 aaKnown RBP7.74□□□□□ -1.17
KPNB1-206ENST00000578718 FAM217BQ9NTX9 383 aaPredicted RBP7.74□□□□□ -1.17
KPNB1-206ENST00000578718 KIAA1468Q9P260 1216 aa7.74□□□□□ -1.17
KPNB1-206ENST00000578718 GTF3C3Q9Y5Q9 886 aa7.74□□□□□ -1.17
KPNB1-206ENST00000578718 MS4A1P11836 297 aa7.73□□□□□ -1.17
KPNB1-206ENST00000578718 SSTR3P32745 418 aaPredicted RBP7.73□□□□□ -1.17
KPNB1-206ENST00000578718 POTEGQ6S5H5 508 aa7.73□□□□□ -1.17
KPNB1-206ENST00000578718 POTEEQ6S8J3 1075 aa7.73□□□□□ -1.17
KPNB1-206ENST00000578718 SULF1Q8IWU6 871 aa7.73□□□□□ -1.17
KPNB1-206ENST00000578718 AXIN2Q9Y2T1 843 aa7.73□□□□□ -1.17
KPNB1-206ENST00000578718 PLEKHG3A1L390 1219 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 TK2O00142 265 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
KPNB1-206ENST00000578718 GOPCQ9HD26 462 aa7.71□□□□□ -1.18
KPNB1-206ENST00000578718 VPS9D1Q9Y2B5 631 aa7.71□□□□□ -1.18
KPNB1-206ENST00000578718 C3orf80F5H4A9 247 aa7.7□□□□□ -1.18
KPNB1-206ENST00000578718 SMAPO00193 183 aa7.7□□□□□ -1.18
KPNB1-206ENST00000578718 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
KPNB1-206ENST00000578718 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
KPNB1-206ENST00000578718 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
KPNB1-206ENST00000578718 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms