RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 FOXD1Q16676 465 aa11.47□□□□□ -0.57
HERPUD1-217ENST00000569429 GGT6Q6P531 493 aa11.47□□□□□ -0.57
HERPUD1-217ENST00000569429 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-217ENST00000569429 PHLPP1O60346 1717 aa11.46□□□□□ -0.57
HERPUD1-217ENST00000569429 UGGT1Q9NYU2 1555 aa11.46□□□□□ -0.57
HERPUD1-217ENST00000569429 FAM135AQ9P2D6 1515 aa11.46□□□□□ -0.57
HERPUD1-217ENST00000569429 TROQ12816 1431 aaPredicted RBP11.45□□□□□ -0.58
HERPUD1-217ENST00000569429 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
HERPUD1-217ENST00000569429 SETBP1Q9Y6X0 1596 aa11.45□□□□□ -0.58
HERPUD1-217ENST00000569429 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
HERPUD1-217ENST00000569429 A2MP01023 1474 aa11.44□□□□□ -0.58
HERPUD1-217ENST00000569429 NLRP1Q9C000 1473 aa11.44□□□□□ -0.58
HERPUD1-217ENST00000569429 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
HERPUD1-217ENST00000569429 PZPP20742 1482 aa11.43□□□□□ -0.58
HERPUD1-217ENST00000569429 LRP6O75581 1613 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 SPAG9O60271 1321 aaKnown RBP11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 SPATA31A6Q5VVP1 1343 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 ATP7AQ04656 1500 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 CLIP1P30622 1438 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 EP400Q96L91 3159 aa11.42□□□□□ -0.58
HERPUD1-217ENST00000569429 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
HERPUD1-217ENST00000569429 ADGBQ8N7X0 1667 aa11.4□□□□□ -0.58
HERPUD1-217ENST00000569429 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
HERPUD1-217ENST00000569429 INO80Q9ULG1 1556 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-217ENST00000569429 COL16A1Q07092 1604 aaPredicted RBP11.39□□□□□ -0.59
HERPUD1-217ENST00000569429 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-217ENST00000569429 FGD6Q6ZV73 1430 aa11.39□□□□□ -0.59
HERPUD1-217ENST00000569429 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-217ENST00000569429 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
HERPUD1-217ENST00000569429 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
HERPUD1-217ENST00000569429 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
HERPUD1-217ENST00000569429 RGS12O14924 1447 aa11.36□□□□□ -0.59
HERPUD1-217ENST00000569429 MAP3K1Q13233 1512 aa11.36□□□□□ -0.59
HERPUD1-217ENST00000569429 TMEM94Q12767 1356 aa11.36□□□□□ -0.59
HERPUD1-217ENST00000569429 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
HERPUD1-217ENST00000569429 LRP5O75197 1615 aa11.35□□□□□ -0.59
HERPUD1-217ENST00000569429 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
HERPUD1-217ENST00000569429 SCAF11Q99590 1463 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-217ENST00000569429 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-217ENST00000569429 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 NUTM2BA6NNL0 878 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 NUTM2EB1AL46 878 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 NUTM2DQ5VT03 806 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 NUTM2AQ8IVF1 878 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 FMN1Q68DA7 1419 aa11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 KIAA1107Q9UPP5 1409 aa11.32□□□□□ -0.6
HERPUD1-217ENST00000569429 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.6
HERPUD1-217ENST00000569429 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
HERPUD1-217ENST00000569429 AFF2P51816 1311 aa11.3□□□□□ -0.6
HERPUD1-217ENST00000569429 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 KCNA6P17658 529 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 LTKP29376 864 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 ABCC3O15438 1527 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 SLIT1O75093 1534 aa11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 PRDM15P57071 1507 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-217ENST00000569429 PLEKHH2Q8IVE3 1493 aa11.28□□□□□ -0.6
HERPUD1-217ENST00000569429 CCDC125Q86Z20 511 aa11.28□□□□□ -0.6
HERPUD1-217ENST00000569429 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-217ENST00000569429 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
HERPUD1-217ENST00000569429 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-217ENST00000569429 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.6
HERPUD1-217ENST00000569429 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
HERPUD1-217ENST00000569429 PROSER2Q86WR7 435 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-217ENST00000569429 MSH6P52701 1360 aa11.27□□□□□ -0.61
HERPUD1-217ENST00000569429 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-217ENST00000569429 KIF3BO15066 747 aa11.25□□□□□ -0.61
HERPUD1-217ENST00000569429 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
HERPUD1-217ENST00000569429 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-217ENST00000569429 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
HERPUD1-217ENST00000569429 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
HERPUD1-217ENST00000569429 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
HERPUD1-217ENST00000569429 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-217ENST00000569429 RTEL1-TNFRSF6BF6WH68 1400 aa11.24□□□□□ -0.61
HERPUD1-217ENST00000569429 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
HERPUD1-217ENST00000569429 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
HERPUD1-217ENST00000569429 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
HERPUD1-217ENST00000569429 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
HERPUD1-217ENST00000569429 YY1P25490 414 aa11.2□□□□□ -0.62
HERPUD1-217ENST00000569429 TET3O43151 1660 aa11.2□□□□□ -0.62
HERPUD1-217ENST00000569429 CHD2O14647 1828 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-217ENST00000569429 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
HERPUD1-217ENST00000569429 C8orf37Q96NL8 207 aa11.18□□□□□ -0.62
HERPUD1-217ENST00000569429 CAMSAP2Q08AD1 1489 aa11.18□□□□□ -0.62
HERPUD1-217ENST00000569429 CFDP1Q9UEE9 299 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-217ENST00000569429 ARHGAP35Q9NRY4 1499 aa11.17□□□□□ -0.62
HERPUD1-217ENST00000569429 NCOA3Q9Y6Q9 1424 aa11.17□□□□□ -0.62
HERPUD1-217ENST00000569429 MBD5Q9P267 1494 aa11.16□□□□□ -0.62
HERPUD1-217ENST00000569429 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
HERPUD1-217ENST00000569429 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
HERPUD1-217ENST00000569429 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.15□□□□□ -0.63
HERPUD1-217ENST00000569429 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
HERPUD1-217ENST00000569429 BLMP54132 1417 aaPredicted RBP11.13□□□□□ -0.63
HERPUD1-217ENST00000569429 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
HERPUD1-217ENST00000569429 TRPC5Q9UL62 973 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms