RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 SLC34A2O95436 690 aa3.42□□□□□ -1.86
SUB1P4-201ENST00000566062 PDIA6Q15084 440 aa3.42□□□□□ -1.86
SUB1P4-201ENST00000566062 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
SUB1P4-201ENST00000566062 RSPH6AQ9H0K4 717 aa3.42□□□□□ -1.86
SUB1P4-201ENST00000566062 MINK1Q8N4C8 1332 aaPredicted RBP3.42□□□□□ -1.86
SUB1P4-201ENST00000566062 RIMBP2O15034 1052 aa3.41□□□□□ -1.86
SUB1P4-201ENST00000566062 FECHP22830 423 aa3.41□□□□□ -1.86
SUB1P4-201ENST00000566062 FOXK1P85037 733 aa3.41□□□□□ -1.86
SUB1P4-201ENST00000566062 DOK7Q18PE1 504 aa3.41□□□□□ -1.86
SUB1P4-201ENST00000566062 CCDC102AQ96A19 550 aa3.41□□□□□ -1.86
SUB1P4-201ENST00000566062 IRF6O14896 467 aa3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 GNPATO15228 680 aa3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 TBC1D12O60347 775 aa3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 UBTFP17480 764 aaKnown RBP3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 MAP2K5Q13163 448 aa3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 TTLL12Q14166 644 aaPredicted RBP3.4□□□□□ -1.87
SUB1P4-201ENST00000566062 ARID3CA6NKF2 412 aa3.39□□□□□ -1.87
SUB1P4-201ENST00000566062 FCHSD2O94868 740 aa3.39□□□□□ -1.87
SUB1P4-201ENST00000566062 OSBPP22059 807 aa3.39□□□□□ -1.87
SUB1P4-201ENST00000566062 DDRGK1Q96HY6 314 aa3.39□□□□□ -1.87
SUB1P4-201ENST00000566062 KRTAP4-8A0A0G2JLE6 195 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 PLEKHG3A1L390 1219 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 GPR37O15354 613 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 EVI5O60447 810 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 HIC1Q14526 733 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 TMEM92Q6UXU6 159 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 PARP9Q8IXQ6 854 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 MARVELD3Q96A59 401 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 RBM33Q96EV2 1170 aaKnown RBP3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 PODXL2Q9NZ53 605 aa3.38□□□□□ -1.87
SUB1P4-201ENST00000566062 APBB1O00213 710 aa3.37□□□□□ -1.87
SUB1P4-201ENST00000566062 HOXB3P14651 431 aaPredicted RBP3.37□□□□□ -1.87
SUB1P4-201ENST00000566062 HOXB1P14653 301 aaPredicted RBP3.37□□□□□ -1.87
SUB1P4-201ENST00000566062 PTCD2Q8WV60 388 aaKnown RBP3.37□□□□□ -1.87
SUB1P4-201ENST00000566062 PCMTD1Q96MG8 357 aaPredicted RBP3.37□□□□□ -1.87
SUB1P4-201ENST00000566062 PSDA5PKW4 1024 aaPredicted RBP3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 PRIM1P49642 420 aaKnown RBP3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 AMHR2Q16671 573 aa3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 ZNF710Q8N1W2 664 aa3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 OXER1Q8TDS5 423 aa3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 PLA2G2EQ9NZK7 142 aa3.36□□□□□ -1.87
SUB1P4-201ENST00000566062 MAP3K7O43318 606 aa3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 MS4A1P11836 297 aa3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 MDM2Q00987 491 aaPredicted RBP3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 FLIIQ13045 1269 aa3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 GIGYF2Q6Y7W6 1299 aaKnown RBP3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 Q6ZNB5 142 aa3.35□□□□□ -1.87
SUB1P4-201ENST00000566062 PTGER2P43116 358 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 PTGDRQ13258 359 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 FAM161AQ3B820 660 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 GPR153Q6NV75 609 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 NLRP7Q8WX94 980 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 CLUAP1Q96AJ1 413 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 REPIN1Q9BWE0 567 aaKnown RBP3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 CDHR5Q9HBB8 845 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 POLR3EQ9NVU0 708 aa3.34□□□□□ -1.87
SUB1P4-201ENST00000566062 SSTR3P32745 418 aaPredicted RBP3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 CLCN1P35523 988 aa3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 TRIM26Q12899 539 aaPredicted RBP3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 PROCA1Q8NCQ7 364 aaPredicted RBP3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 C1orf115Q9H7X2 142 aa3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 ZNF777Q9ULD5 760 aaPredicted RBP3.33□□□□□ -1.88
SUB1P4-201ENST00000566062 KDM4FA0A1W2PPD8 638 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 TSR1Q2NL82 804 aaKnown RBP3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 PSMG3-AS1Q96PY0 264 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 BEGAINQ9BUH8 593 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 ANO8Q9HCE9 1232 aaPredicted RBP3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 PCDHGA4Q9Y5G9 962 aa3.32□□□□□ -1.88
SUB1P4-201ENST00000566062 RAD21O60216 631 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 TRAK2O60296 914 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 PHF14O94880 888 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 PBX2P40425 430 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 EMP3P54852 163 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 EN1Q05925 392 aaPredicted RBP3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 EPAS1Q99814 870 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 GPCPD1Q9NPB8 672 aa3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 NPDC1Q9NQX5 325 aaPredicted RBP3.31□□□□□ -1.88
SUB1P4-201ENST00000566062 BTBD11A6QL63 1104 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 PDIA4P13667 645 aaKnown RBP3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 SKIV2LQ15477 1246 aaKnown RBP3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 SH3D19Q5HYK7 790 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 TYW1BQ6NUM6 668 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 PHOX2BQ99453 314 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 GOPCQ9HD26 462 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 MYT1LQ9UL68 1186 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 PCDHGA10Q9Y5H3 936 aa3.3□□□□□ -1.88
SUB1P4-201ENST00000566062 OATP04181 439 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 HRCP23327 699 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 ARSIQ5FYB1 569 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 PADI6Q6TGC4 694 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 ZNF687Q8N1G0 1237 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 CCDC82Q8N4S0 544 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 POM121Q96HA1 1249 aa3.29□□□□□ -1.88
SUB1P4-201ENST00000566062 ERBB3P21860 1342 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 A6NJR5 290 aa3.28□□□□□ -1.88
SUB1P4-201ENST00000566062 RANGAP1P46060 587 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms