RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 AEBP1Q8IUX7 1158 aa11.8□□□□□ -0.52
ZEB1-210ENST00000557827 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
ZEB1-210ENST00000557827 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
ZEB1-210ENST00000557827 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
ZEB1-210ENST00000557827 TBC1D12O60347 775 aa11.77□□□□□ -0.53
ZEB1-210ENST00000557827 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
ZEB1-210ENST00000557827 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
ZEB1-210ENST00000557827 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
ZEB1-210ENST00000557827 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
ZEB1-210ENST00000557827 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
ZEB1-210ENST00000557827 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
ZEB1-210ENST00000557827 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
ZEB1-210ENST00000557827 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
ZEB1-210ENST00000557827 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
ZEB1-210ENST00000557827 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
ZEB1-210ENST00000557827 G3V3G9 751 aa11.74□□□□□ -0.53
ZEB1-210ENST00000557827 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
ZEB1-210ENST00000557827 EVI5O60447 810 aa11.73□□□□□ -0.53
ZEB1-210ENST00000557827 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
ZEB1-210ENST00000557827 PHOX2BQ99453 314 aa11.73□□□□□ -0.53
ZEB1-210ENST00000557827 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
ZEB1-210ENST00000557827 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZEB1-210ENST00000557827 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-210ENST00000557827 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
ZEB1-210ENST00000557827 RGS22Q8NE09 1264 aa11.69□□□□□ -0.54
ZEB1-210ENST00000557827 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
ZEB1-210ENST00000557827 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
ZEB1-210ENST00000557827 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
ZEB1-210ENST00000557827 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
ZEB1-210ENST00000557827 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
ZEB1-210ENST00000557827 IRF5Q13568 498 aa11.67□□□□□ -0.54
ZEB1-210ENST00000557827 MYSM1Q5VVJ2 828 aa11.67□□□□□ -0.54
ZEB1-210ENST00000557827 GZF1Q9H116 711 aaPredicted RBP11.67□□□□□ -0.54
ZEB1-210ENST00000557827 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
ZEB1-210ENST00000557827 RFC5P40937 340 aa11.64□□□□□ -0.55
ZEB1-210ENST00000557827 MTMR7Q9Y216 660 aa11.64□□□□□ -0.55
ZEB1-210ENST00000557827 PPP1R15AO75807 674 aaPredicted RBP11.63□□□□□ -0.55
ZEB1-210ENST00000557827 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
ZEB1-210ENST00000557827 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
ZEB1-210ENST00000557827 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
ZEB1-210ENST00000557827 IER5LQ5T953 404 aa11.62□□□□□ -0.55
ZEB1-210ENST00000557827 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
ZEB1-210ENST00000557827 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
ZEB1-210ENST00000557827 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
ZEB1-210ENST00000557827 MFAP1P55081 439 aaKnown RBP11.61□□□□□ -0.55
ZEB1-210ENST00000557827 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
ZEB1-210ENST00000557827 MAP3K7O43318 606 aa11.6□□□□□ -0.55
ZEB1-210ENST00000557827 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
ZEB1-210ENST00000557827 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
ZEB1-210ENST00000557827 EPAS1Q99814 870 aa11.6□□□□□ -0.55
ZEB1-210ENST00000557827 FBXO31Q5XUX0 539 aaPredicted RBP11.59□□□□□ -0.55
ZEB1-210ENST00000557827 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
ZEB1-210ENST00000557827 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
ZEB1-210ENST00000557827 PHF14O94880 888 aa11.58□□□□□ -0.56
ZEB1-210ENST00000557827 OATP04181 439 aa11.58□□□□□ -0.56
ZEB1-210ENST00000557827 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
ZEB1-210ENST00000557827 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
ZEB1-210ENST00000557827 TBC1D2Q9BYX2 928 aa11.58□□□□□ -0.56
ZEB1-210ENST00000557827 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
ZEB1-210ENST00000557827 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
ZEB1-210ENST00000557827 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
ZEB1-210ENST00000557827 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
ZEB1-210ENST00000557827 PDE4CQ08493 712 aa11.56□□□□□ -0.56
ZEB1-210ENST00000557827 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
ZEB1-210ENST00000557827 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
ZEB1-210ENST00000557827 TSR1Q2NL82 804 aaKnown RBP11.55□□□□□ -0.56
ZEB1-210ENST00000557827 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
ZEB1-210ENST00000557827 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
ZEB1-210ENST00000557827 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
ZEB1-210ENST00000557827 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
ZEB1-210ENST00000557827 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
ZEB1-210ENST00000557827 ASTLQ6HA08 431 aaPredicted RBP11.53□□□□□ -0.56
ZEB1-210ENST00000557827 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
ZEB1-210ENST00000557827 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
ZEB1-210ENST00000557827 PXYLP1Q8TE99 480 aa11.52□□□□□ -0.57
ZEB1-210ENST00000557827 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
ZEB1-210ENST00000557827 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
ZEB1-210ENST00000557827 POM121CA8CG34 1229 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 PLCG2P16885 1265 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 ABL2P42684 1182 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 RIC3Q7Z5B4 369 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 GLMNQ92990 594 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
ZEB1-210ENST00000557827 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
ZEB1-210ENST00000557827 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
ZEB1-210ENST00000557827 RBM25P49756 843 aaKnown RBP11.48□□□□□ -0.57
ZEB1-210ENST00000557827 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
ZEB1-210ENST00000557827 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
ZEB1-210ENST00000557827 PRM3Q9NNZ6 103 aa11.48□□□□□ -0.57
ZEB1-210ENST00000557827 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
ZEB1-210ENST00000557827 SOCS7O14512 581 aa11.46□□□□□ -0.57
ZEB1-210ENST00000557827 LHX8Q68G74 356 aa11.46□□□□□ -0.57
ZEB1-210ENST00000557827 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
ZEB1-210ENST00000557827 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
ZEB1-210ENST00000557827 SLC34A2O95436 690 aa11.45□□□□□ -0.58
ZEB1-210ENST00000557827 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
ZEB1-210ENST00000557827 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
ZEB1-210ENST00000557827 C7P10643 843 aa11.44□□□□□ -0.58
ZEB1-210ENST00000557827 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
ZEB1-210ENST00000557827 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms