RNA–Protein interactions for RNA: ENST00000557557.1

PSMC6-216, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 2,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-216ENST00000557557 ZSCAN30Q86W11 494 aa8.74□□□□□ -1.01
PSMC6-216ENST00000557557 TRIM34Q9BYJ4 488 aa8.74□□□□□ -1.01
PSMC6-216ENST00000557557 MLECQ14165 292 aa8.73□□□□□ -1.01
PSMC6-216ENST00000557557 RNF123Q5XPI4 1314 aa8.73□□□□□ -1.01
PSMC6-216ENST00000557557 SPDYE4A6NLX3 237 aa8.73□□□□□ -1.01
PSMC6-216ENST00000557557 PTMAP06454 111 aaKnown RBP8.73□□□□□ -1.01
PSMC6-216ENST00000557557 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
PSMC6-216ENST00000557557 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
PSMC6-216ENST00000557557 ZNF622Q969S3 477 aaKnown RBP eCLIP8.72□□□□□ -1.01
PSMC6-216ENST00000557557 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
PSMC6-216ENST00000557557 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.01
PSMC6-216ENST00000557557 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.01
PSMC6-216ENST00000557557 ATP2B3Q16720 1220 aa8.71□□□□□ -1.01
PSMC6-216ENST00000557557 JARID2Q92833 1246 aaPredicted RBP8.71□□□□□ -1.01
PSMC6-216ENST00000557557 TRAK2O60296 914 aa8.71□□□□□ -1.02
PSMC6-216ENST00000557557 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.02
PSMC6-216ENST00000557557 TSC1Q92574 1164 aa8.7□□□□□ -1.02
PSMC6-216ENST00000557557 PTMSP20962 102 aa8.7□□□□□ -1.02
PSMC6-216ENST00000557557 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
PSMC6-216ENST00000557557 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.7□□□□□ -1.02
PSMC6-216ENST00000557557 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
PSMC6-216ENST00000557557 SOGA1O94964 1423 aa8.69□□□□□ -1.02
PSMC6-216ENST00000557557 TNIKQ9UKE5 1360 aa8.69□□□□□ -1.02
PSMC6-216ENST00000557557 BECN1Q14457 450 aa8.69□□□□□ -1.02
PSMC6-216ENST00000557557 RALBP1Q15311 655 aa8.69□□□□□ -1.02
PSMC6-216ENST00000557557 TRHP20396 242 aaPredicted RBP8.68□□□□□ -1.02
PSMC6-216ENST00000557557 MCM4P33991 863 aa8.68□□□□□ -1.02
PSMC6-216ENST00000557557 SLC20A2Q08357 652 aa8.68□□□□□ -1.02
PSMC6-216ENST00000557557 GRIPAP1Q4V328 841 aa8.68□□□□□ -1.02
PSMC6-216ENST00000557557 AXDND1Q5T1B0 1012 aaPredicted RBP8.68□□□□□ -1.02
PSMC6-216ENST00000557557 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
PSMC6-216ENST00000557557 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
PSMC6-216ENST00000557557 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
PSMC6-216ENST00000557557 GAS2L3Q86XJ1 694 aa8.67□□□□□ -1.02
PSMC6-216ENST00000557557 RRP1P56182 461 aaKnown RBP8.66□□□□□ -1.02
PSMC6-216ENST00000557557 PANK3Q9H999 370 aa8.66□□□□□ -1.02
PSMC6-216ENST00000557557 TAOK2Q9UL54 1235 aa8.66□□□□□ -1.02
PSMC6-216ENST00000557557 RUSC2Q8N2Y8 1516 aa8.66□□□□□ -1.02
PSMC6-216ENST00000557557 FAM177BA6PVY3 158 aa8.66□□□□□ -1.02
PSMC6-216ENST00000557557 CAPN2P17655 700 aa8.66□□□□□ -1.02
PSMC6-216ENST00000557557 GEMIN8Q9NWZ8 242 aaKnown RBP8.66□□□□□ -1.02
PSMC6-216ENST00000557557 MPNDQ8N594 471 aa8.65□□□□□ -1.02
PSMC6-216ENST00000557557 BANK1Q8NDB2 785 aa8.65□□□□□ -1.03
PSMC6-216ENST00000557557 ZNF592Q92610 1267 aa8.65□□□□□ -1.03
PSMC6-216ENST00000557557 TNNT3P45378 269 aaPredicted RBP8.64□□□□□ -1.03
PSMC6-216ENST00000557557 SASS6Q6UVJ0 657 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 TICAM2Q86XR7 235 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 CCDC173Q0VFZ6 552 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 TIGD1Q96MW7 591 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
PSMC6-216ENST00000557557 ANTXR1Q9H6X2 564 aa8.64□□□□□ -1.03
PSMC6-216ENST00000557557 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
PSMC6-216ENST00000557557 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
PSMC6-216ENST00000557557 PLCD4Q9BRC7 762 aa8.63□□□□□ -1.03
PSMC6-216ENST00000557557 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
PSMC6-216ENST00000557557 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
PSMC6-216ENST00000557557 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
PSMC6-216ENST00000557557 EGFL6Q8IUX8 553 aa8.62□□□□□ -1.03
PSMC6-216ENST00000557557 TMX1Q9H3N1 280 aa8.62□□□□□ -1.03
PSMC6-216ENST00000557557 PLIN1O60240 522 aa8.62□□□□□ -1.03
PSMC6-216ENST00000557557 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
PSMC6-216ENST00000557557 ZNF526Q8TF50 670 aaPredicted RBP8.62□□□□□ -1.03
PSMC6-216ENST00000557557 MAPKBP1O60336 1514 aa8.62□□□□□ -1.03
PSMC6-216ENST00000557557 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
PSMC6-216ENST00000557557 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
PSMC6-216ENST00000557557 U2AF2P26368 475 aaKnown RBP eCLIP8.61□□□□□ -1.03
PSMC6-216ENST00000557557 YY1AP1Q9H869 796 aa8.61□□□□□ -1.03
PSMC6-216ENST00000557557 ISY1Q9ULR0 285 aaKnown RBP8.61□□□□□ -1.03
PSMC6-216ENST00000557557 PHF14O94880 888 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 ERICH4A6NGS2 130 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 IRF6O14896 467 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 ZNF500O60304 480 aaPredicted RBP8.6□□□□□ -1.03
PSMC6-216ENST00000557557 CSPP1Q1MSJ5 1256 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 CT47A1Q5JQC4 288 aaPredicted RBP8.6□□□□□ -1.03
PSMC6-216ENST00000557557 STK26Q9P289 416 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 RCAN3Q9UKA8 241 aa8.6□□□□□ -1.03
PSMC6-216ENST00000557557 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
PSMC6-216ENST00000557557 PPP1R9BQ96SB3 815 aa8.59□□□□□ -1.03
PSMC6-216ENST00000557557 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
PSMC6-216ENST00000557557 RAB3GAP2Q9H2M9 1393 aa8.59□□□□□ -1.03
PSMC6-216ENST00000557557 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
PSMC6-216ENST00000557557 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
PSMC6-216ENST00000557557 PHLDB1Q86UU1 1377 aa8.59□□□□□ -1.04
PSMC6-216ENST00000557557 PDCL2Q8N4E4 241 aa8.58□□□□□ -1.04
PSMC6-216ENST00000557557 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
PSMC6-216ENST00000557557 TNNT1P13805 278 aa8.58□□□□□ -1.04
PSMC6-216ENST00000557557 GPATCH11Q8N954 259 aa8.58□□□□□ -1.04
PSMC6-216ENST00000557557 C20orf194Q5TEA3 1177 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.57□□□□□ -1.04
PSMC6-216ENST00000557557 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
PSMC6-216ENST00000557557 TULP2O00295 520 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 MCCP23508 829 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 MYRIPQ8NFW9 859 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 UPF2Q9HAU5 1272 aaKnown RBP8.57□□□□□ -1.04
PSMC6-216ENST00000557557 CLIP1P30622 1438 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 SEC24BO95487 1268 aa8.57□□□□□ -1.04
PSMC6-216ENST00000557557 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms