RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
ABCD4-226ENST00000556971 GGT6Q6P531 493 aa21.2■□□□□ 0.98
ABCD4-226ENST00000556971 CDC42BPBQ9Y5S2 1711 aa21.2■□□□□ 0.98
ABCD4-226ENST00000556971 RGS12O14924 1447 aa21.2■□□□□ 0.98
ABCD4-226ENST00000556971 FOXD1Q16676 465 aa21.19■□□□□ 0.98
ABCD4-226ENST00000556971 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
ABCD4-226ENST00000556971 FAM135AQ9P2D6 1515 aa21.18■□□□□ 0.98
ABCD4-226ENST00000556971 THEMISQ8N1K5 641 aaPredicted RBP21.17■□□□□ 0.98
ABCD4-226ENST00000556971 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
ABCD4-226ENST00000556971 ZC3H13Q5T200 1668 aaKnown RBP21.17■□□□□ 0.98
ABCD4-226ENST00000556971 FBXO31Q5XUX0 539 aaPredicted RBP21.16■□□□□ 0.98
ABCD4-226ENST00000556971 SAMD9LQ8IVG5 1584 aa21.15■□□□□ 0.98
ABCD4-226ENST00000556971 NUTM2BA6NNL0 878 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-226ENST00000556971 NUTM2EB1AL46 878 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-226ENST00000556971 NUTM2DQ5VT03 806 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-226ENST00000556971 NUTM2AQ8IVF1 878 aaPredicted RBP21.14■□□□□ 0.97
ABCD4-226ENST00000556971 LRRC9Q6ZRR7 1453 aa21.11■□□□□ 0.97
ABCD4-226ENST00000556971 COL16A1Q07092 1604 aaPredicted RBP21.11■□□□□ 0.97
ABCD4-226ENST00000556971 KDM5DQ9BY66 1539 aa21.1■□□□□ 0.97
ABCD4-226ENST00000556971 A2MP01023 1474 aa21.1■□□□□ 0.97
ABCD4-226ENST00000556971 PREX2Q70Z35 1606 aa21.1■□□□□ 0.97
ABCD4-226ENST00000556971 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
ABCD4-226ENST00000556971 LRP5O75197 1615 aa21.09■□□□□ 0.97
ABCD4-226ENST00000556971 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
ABCD4-226ENST00000556971 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
ABCD4-226ENST00000556971 TMEM94Q12767 1356 aa21.06■□□□□ 0.96
ABCD4-226ENST00000556971 PZPP20742 1482 aa21.06■□□□□ 0.96
ABCD4-226ENST00000556971 ATAD2Q6PL18 1390 aa21.05■□□□□ 0.96
ABCD4-226ENST00000556971 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
ABCD4-226ENST00000556971 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
ABCD4-226ENST00000556971 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
ABCD4-226ENST00000556971 AFF2P51816 1311 aa21.02■□□□□ 0.95
ABCD4-226ENST00000556971 FGD6Q6ZV73 1430 aa21.01■□□□□ 0.95
ABCD4-226ENST00000556971 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
ABCD4-226ENST00000556971 CLIP1P30622 1438 aa21■□□□□ 0.95
ABCD4-226ENST00000556971 INO80Q9ULG1 1556 aaPredicted RBP21■□□□□ 0.95
ABCD4-226ENST00000556971 SHPRHQ149N8 1683 aa20.99■□□□□ 0.95
ABCD4-226ENST00000556971 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
ABCD4-226ENST00000556971 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
ABCD4-226ENST00000556971 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
ABCD4-226ENST00000556971 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
ABCD4-226ENST00000556971 YY1P25490 414 aa20.95■□□□□ 0.94
ABCD4-226ENST00000556971 RBM6P78332 1123 aaKnown RBP20.95■□□□□ 0.94
ABCD4-226ENST00000556971 EP400Q96L91 3159 aa20.92■□□□□ 0.94
ABCD4-226ENST00000556971 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
ABCD4-226ENST00000556971 ADGBQ8N7X0 1667 aa20.91■□□□□ 0.94
ABCD4-226ENST00000556971 QTRT2Q9H974 415 aaKnown RBP20.9■□□□□ 0.94
ABCD4-226ENST00000556971 SLAIN2Q9P270 581 aa20.9■□□□□ 0.94
ABCD4-226ENST00000556971 CDC42BPAQ5VT25 1732 aa20.9■□□□□ 0.94
ABCD4-226ENST00000556971 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
ABCD4-226ENST00000556971 MSH6P52701 1360 aa20.87■□□□□ 0.93
ABCD4-226ENST00000556971 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.93
ABCD4-226ENST00000556971 PROSER2Q86WR7 435 aaPredicted RBP20.87■□□□□ 0.93
ABCD4-226ENST00000556971 LTKP29376 864 aa20.85■□□□□ 0.93
ABCD4-226ENST00000556971 UBR1Q8IWV7 1749 aa20.84■□□□□ 0.93
ABCD4-226ENST00000556971 PRDM15P57071 1507 aaPredicted RBP20.83■□□□□ 0.93
ABCD4-226ENST00000556971 AHDC1Q5TGY3 1603 aaPredicted RBP20.83■□□□□ 0.93
ABCD4-226ENST00000556971 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
ABCD4-226ENST00000556971 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
ABCD4-226ENST00000556971 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
ABCD4-226ENST00000556971 C8orf37Q96NL8 207 aa20.81■□□□□ 0.92
ABCD4-226ENST00000556971 DIP2AQ14689 1571 aa20.8■□□□□ 0.92
ABCD4-226ENST00000556971 TXNDC2Q86VQ3 553 aa20.8■□□□□ 0.92
ABCD4-226ENST00000556971 LRRIQ1Q96JM4 1722 aa20.8■□□□□ 0.92
ABCD4-226ENST00000556971 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
ABCD4-226ENST00000556971 WASHC2CQ9Y4E1 1318 aa20.79■□□□□ 0.92
ABCD4-226ENST00000556971 NGLY1Q96IV0 654 aa20.79■□□□□ 0.92
ABCD4-226ENST00000556971 KDM5AP29375 1690 aaKnown RBP20.78■□□□□ 0.92
ABCD4-226ENST00000556971 ARHGAP23Q9P227 1491 aa20.78■□□□□ 0.92
ABCD4-226ENST00000556971 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
ABCD4-226ENST00000556971 KCNA6P17658 529 aa20.78■□□□□ 0.92
ABCD4-226ENST00000556971 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
ABCD4-226ENST00000556971 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
ABCD4-226ENST00000556971 SLIT1O75093 1534 aa20.76■□□□□ 0.91
ABCD4-226ENST00000556971 ABCC3O15438 1527 aa20.75■□□□□ 0.91
ABCD4-226ENST00000556971 KIF3BO15066 747 aa20.75■□□□□ 0.91
ABCD4-226ENST00000556971 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
ABCD4-226ENST00000556971 ERVK-7P63135 1459 aa20.71■□□□□ 0.91
ABCD4-226ENST00000556971 PSDA5PKW4 1024 aaPredicted RBP20.71■□□□□ 0.91
ABCD4-226ENST00000556971 DEFB132Q7Z7B7 95 aa20.7■□□□□ 0.9
ABCD4-226ENST00000556971 DHX29Q7Z478 1369 aaKnown RBP20.7■□□□□ 0.9
ABCD4-226ENST00000556971 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
ABCD4-226ENST00000556971 HRCP23327 699 aa20.69■□□□□ 0.9
ABCD4-226ENST00000556971 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
ABCD4-226ENST00000556971 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
ABCD4-226ENST00000556971 BCL9LQ86UU0 1499 aa20.65■□□□□ 0.9
ABCD4-226ENST00000556971 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
ABCD4-226ENST00000556971 MAST1Q9Y2H9 1570 aa20.64■□□□□ 0.9
ABCD4-226ENST00000556971 BLMP54132 1417 aaPredicted RBP20.64■□□□□ 0.89
ABCD4-226ENST00000556971 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
ABCD4-226ENST00000556971 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
ABCD4-226ENST00000556971 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
ABCD4-226ENST00000556971 TET3O43151 1660 aa20.58■□□□□ 0.89
ABCD4-226ENST00000556971 ADAMTS2O95450 1211 aa20.58■□□□□ 0.89
ABCD4-226ENST00000556971 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
ABCD4-226ENST00000556971 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.88
ABCD4-226ENST00000556971 TMEM2Q9UHN6 1383 aa20.58■□□□□ 0.88
ABCD4-226ENST00000556971 USP21Q9UK80 565 aa20.57■□□□□ 0.88
ABCD4-226ENST00000556971 RTEL1-TNFRSF6BF6WH68 1400 aa20.56■□□□□ 0.88
ABCD4-226ENST00000556971 ATRNO75882 1429 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms