RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.34
LINC01197-202ENST00000555332 MRRFQ96E11 262 aaKnown RBP6.65□□□□□ -1.35
LINC01197-202ENST00000555332 CLASP1Q7Z460 1538 aa6.65□□□□□ -1.35
LINC01197-202ENST00000555332 ZNF526Q8TF50 670 aaPredicted RBP6.64□□□□□ -1.35
LINC01197-202ENST00000555332 MINK1Q8N4C8 1332 aaPredicted RBP6.64□□□□□ -1.35
LINC01197-202ENST00000555332 CALR3Q96L12 384 aaKnown RBP6.64□□□□□ -1.35
LINC01197-202ENST00000555332 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.63□□□□□ -1.35
LINC01197-202ENST00000555332 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
LINC01197-202ENST00000555332 SPDYE2BA6NHP3 402 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 SPDYE6P0CI01 402 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 SPDYE2Q495Y8 402 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.63□□□□□ -1.35
LINC01197-202ENST00000555332 IRF6O14896 467 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 RASEFQ8IZ41 740 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 ABCB7O75027 752 aa6.63□□□□□ -1.35
LINC01197-202ENST00000555332 BIVM-ERCC5R4GMW8 1640 aa6.62□□□□□ -1.35
LINC01197-202ENST00000555332 MAP2K5Q13163 448 aa6.62□□□□□ -1.35
LINC01197-202ENST00000555332 SKIV2LQ15477 1246 aaKnown RBP6.62□□□□□ -1.35
LINC01197-202ENST00000555332 DNMBPQ6XZF7 1577 aa6.62□□□□□ -1.35
LINC01197-202ENST00000555332 RFX1P22670 979 aa6.62□□□□□ -1.35
LINC01197-202ENST00000555332 NESP48681 1621 aa6.62□□□□□ -1.35
LINC01197-202ENST00000555332 GIGYF2Q6Y7W6 1299 aaKnown RBP6.61□□□□□ -1.35
LINC01197-202ENST00000555332 BCCIPQ9P287 314 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC01197-202ENST00000555332 ABCC8Q09428 1581 aa6.61□□□□□ -1.35
LINC01197-202ENST00000555332 CANXP27824 592 aaKnown RBP6.61□□□□□ -1.35
LINC01197-202ENST00000555332 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
LINC01197-202ENST00000555332 ATP1B4Q9UN42 357 aaPredicted RBP6.61□□□□□ -1.35
LINC01197-202ENST00000555332 PROCA1Q8NCQ7 364 aaPredicted RBP6.61□□□□□ -1.35
LINC01197-202ENST00000555332 GLMNQ92990 594 aa6.61□□□□□ -1.35
LINC01197-202ENST00000555332 PBRM1Q86U86 1689 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 ABCA5Q8WWZ7 1642 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 POM121CA8CG34 1229 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 SH3D19Q5HYK7 790 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 TICAM2Q86XR7 235 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 OXER1Q8TDS5 423 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 DDX27Q96GQ7 796 aaKnown RBP6.6□□□□□ -1.35
LINC01197-202ENST00000555332 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 PPP1R1BQ9UD71 204 aaPredicted RBP6.6□□□□□ -1.35
LINC01197-202ENST00000555332 ANKRD13AQ8IZ07 590 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 PBXIP1Q96AQ6 731 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 USTQ9Y2C2 406 aa6.6□□□□□ -1.35
LINC01197-202ENST00000555332 CC2D2BQ6DHV5 1058 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 REPIN1Q9BWE0 567 aaKnown RBP6.59□□□□□ -1.35
LINC01197-202ENST00000555332 MFSD10Q14728 455 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 TXNDC2Q86VQ3 553 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 CHD1O14646 1710 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 CAPN15O75808 1086 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 CSB-PGBD3P0DP91 1061 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 FECHP22830 423 aa6.59□□□□□ -1.35
LINC01197-202ENST00000555332 CAMK2BQ13554 666 aa6.58□□□□□ -1.36
LINC01197-202ENST00000555332 SPDYE5A6NIY4 337 aa6.58□□□□□ -1.36
LINC01197-202ENST00000555332 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
LINC01197-202ENST00000555332 EIF4G3O43432 1585 aaKnown RBP6.58□□□□□ -1.36
LINC01197-202ENST00000555332 PDS5BQ9NTI5 1447 aa6.58□□□□□ -1.36
LINC01197-202ENST00000555332 SREK1Q8WXA9 508 aaKnown RBP6.57□□□□□ -1.36
LINC01197-202ENST00000555332 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
LINC01197-202ENST00000555332 TBC1D12O60347 775 aa6.57□□□□□ -1.36
LINC01197-202ENST00000555332 PRDM16Q9HAZ2 1276 aa6.57□□□□□ -1.36
LINC01197-202ENST00000555332 URB2Q14146 1524 aaKnown RBP6.57□□□□□ -1.36
LINC01197-202ENST00000555332 ANKRD62A6NC57 917 aa6.57□□□□□ -1.36
LINC01197-202ENST00000555332 PDE4AP27815 886 aa6.57□□□□□ -1.36
LINC01197-202ENST00000555332 TCF3P15923 654 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 NOL8Q76FK4 1167 aaKnown RBP6.56□□□□□ -1.36
LINC01197-202ENST00000555332 RIMBP3CA6NJZ7 1639 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 RIMBP3BA6NNM3 1639 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 RIMBP3Q9UFD9 1639 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 CLSTN1O94985 981 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 PPARGC1BQ86YN6 1023 aaKnown RBP6.56□□□□□ -1.36
LINC01197-202ENST00000555332 FBXO22Q8NEZ5 403 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 POLR3EQ9NVU0 708 aa6.56□□□□□ -1.36
LINC01197-202ENST00000555332 NUTM2FA1L443 756 aa6.55□□□□□ -1.36
LINC01197-202ENST00000555332 NCLP19338 710 aaKnown RBP6.55□□□□□ -1.36
LINC01197-202ENST00000555332 CRISPLD2Q9H0B8 497 aa6.55□□□□□ -1.36
LINC01197-202ENST00000555332 DPYSL4O14531 572 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 MARCH6O60337 910 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 ZNF16P17020 682 aaPredicted RBP6.53□□□□□ -1.36
LINC01197-202ENST00000555332 DSG3P32926 999 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 ZNF662Q6ZS27 426 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 HIRIP3Q9BW71 556 aaPredicted RBP6.53□□□□□ -1.36
LINC01197-202ENST00000555332 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 GIMAP6Q6P9H5 292 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 VRTNQ9H8Y1 702 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 PHF8Q9UPP1 1060 aa6.53□□□□□ -1.36
LINC01197-202ENST00000555332 ABL2P42684 1182 aa6.52□□□□□ -1.37
LINC01197-202ENST00000555332 MNX1P50219 401 aaPredicted RBP6.52□□□□□ -1.37
LINC01197-202ENST00000555332 CEP164Q9UPV0 1460 aa6.52□□□□□ -1.37
LINC01197-202ENST00000555332 SRPK2P78362 688 aaKnown RBP6.52□□□□□ -1.37
LINC01197-202ENST00000555332 ZNF467Q7Z7K2 595 aaPredicted RBP6.52□□□□□ -1.37
LINC01197-202ENST00000555332 GNPATO15228 680 aa6.52□□□□□ -1.37
LINC01197-202ENST00000555332 PDAP1Q13442 181 aaKnown RBP6.52□□□□□ -1.37
LINC01197-202ENST00000555332 CFAP70Q5T0N1 1121 aa6.52□□□□□ -1.37
LINC01197-202ENST00000555332 FBXO31Q5XUX0 539 aaPredicted RBP6.52□□□□□ -1.37
LINC01197-202ENST00000555332 ZC3H4Q9UPT8 1303 aaKnown RBP6.51□□□□□ -1.37
LINC01197-202ENST00000555332 PCDHB8Q9UN66 801 aa6.51□□□□□ -1.37
LINC01197-202ENST00000555332 PCDHB13Q9Y5F0 798 aa6.51□□□□□ -1.37
LINC01197-202ENST00000555332 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
LINC01197-202ENST00000555332 NEFLP07196 543 aa6.51□□□□□ -1.37
LINC01197-202ENST00000555332 TSR1Q2NL82 804 aaKnown RBP6.51□□□□□ -1.37
LINC01197-202ENST00000555332 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
LINC01197-202ENST00000555332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms