RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 DPYSL4O14531 572 aa13.77□□□□□ -0.21
GNPTAB-209ENST00000552009 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
GNPTAB-209ENST00000552009 PHF14O94880 888 aa13.72□□□□□ -0.21
GNPTAB-209ENST00000552009 E2F4Q16254 413 aa13.72□□□□□ -0.21
GNPTAB-209ENST00000552009 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
GNPTAB-209ENST00000552009 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
GNPTAB-209ENST00000552009 SLC4A5Q9BY07 1137 aa13.71□□□□□ -0.21
GNPTAB-209ENST00000552009 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
GNPTAB-209ENST00000552009 PCDHGA10Q9Y5H3 936 aa13.7□□□□□ -0.22
GNPTAB-209ENST00000552009 HRO43593 1189 aa13.69□□□□□ -0.22
GNPTAB-209ENST00000552009 EPAS1Q99814 870 aa13.69□□□□□ -0.22
GNPTAB-209ENST00000552009 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
GNPTAB-209ENST00000552009 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
GNPTAB-209ENST00000552009 ZBED2Q9BTP6 218 aa13.64□□□□□ -0.23
GNPTAB-209ENST00000552009 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
GNPTAB-209ENST00000552009 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
GNPTAB-209ENST00000552009 PDIA6Q15084 440 aa13.62□□□□□ -0.23
GNPTAB-209ENST00000552009 DDX12PQ92771 950 aa13.62□□□□□ -0.23
GNPTAB-209ENST00000552009 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
GNPTAB-209ENST00000552009 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
GNPTAB-209ENST00000552009 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
GNPTAB-209ENST00000552009 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
GNPTAB-209ENST00000552009 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
GNPTAB-209ENST00000552009 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
GNPTAB-209ENST00000552009 NBR1Q14596 966 aa13.56□□□□□ -0.24
GNPTAB-209ENST00000552009 C6orf132Q5T0Z8 1188 aa13.56□□□□□ -0.24
GNPTAB-209ENST00000552009 COL9A1P20849 921 aa13.54□□□□□ -0.24
GNPTAB-209ENST00000552009 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
GNPTAB-209ENST00000552009 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
GNPTAB-209ENST00000552009 MAP3K7O43318 606 aa13.52□□□□□ -0.25
GNPTAB-209ENST00000552009 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
GNPTAB-209ENST00000552009 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
GNPTAB-209ENST00000552009 WNT2BQ93097 391 aa13.5□□□□□ -0.25
GNPTAB-209ENST00000552009 GRXCR2A6NFK2 248 aa13.49□□□□□ -0.25
GNPTAB-209ENST00000552009 ONECUT3O60422 494 aaPredicted RBP13.49□□□□□ -0.25
GNPTAB-209ENST00000552009 PTPN5P54829 565 aa13.46□□□□□ -0.25
GNPTAB-209ENST00000552009 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
GNPTAB-209ENST00000552009 THSD4Q6ZMP0 1018 aa13.44□□□□□ -0.26
GNPTAB-209ENST00000552009 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
GNPTAB-209ENST00000552009 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
GNPTAB-209ENST00000552009 PLA2G2EQ9NZK7 142 aa13.44□□□□□ -0.26
GNPTAB-209ENST00000552009 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
GNPTAB-209ENST00000552009 ANKK1Q8NFD2 765 aa13.43□□□□□ -0.26
GNPTAB-209ENST00000552009 CERKQ8TCT0 537 aa13.43□□□□□ -0.26
GNPTAB-209ENST00000552009 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
GNPTAB-209ENST00000552009 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
GNPTAB-209ENST00000552009 PACS2Q86VP3 889 aa13.41□□□□□ -0.26
GNPTAB-209ENST00000552009 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
GNPTAB-209ENST00000552009 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
GNPTAB-209ENST00000552009 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
GNPTAB-209ENST00000552009 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
GNPTAB-209ENST00000552009 OSBPP22059 807 aa13.35□□□□□ -0.27
GNPTAB-209ENST00000552009 FAM98CQ17RN3 349 aaKnown RBP13.35□□□□□ -0.27
GNPTAB-209ENST00000552009 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
GNPTAB-209ENST00000552009 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
GNPTAB-209ENST00000552009 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
GNPTAB-209ENST00000552009 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
GNPTAB-209ENST00000552009 PRSS12P56730 875 aa13.33□□□□□ -0.28
GNPTAB-209ENST00000552009 ERCC6Q03468 1493 aa13.33□□□□□ -0.28
GNPTAB-209ENST00000552009 NESP48681 1621 aa13.32□□□□□ -0.28
GNPTAB-209ENST00000552009 SMARCA2P51531 1590 aa13.32□□□□□ -0.28
GNPTAB-209ENST00000552009 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
GNPTAB-209ENST00000552009 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
GNPTAB-209ENST00000552009 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
GNPTAB-209ENST00000552009 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
GNPTAB-209ENST00000552009 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
GNPTAB-209ENST00000552009 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
GNPTAB-209ENST00000552009 NBPF26B4DH59 902 aa13.28□□□□□ -0.28
GNPTAB-209ENST00000552009 BCAMP50895 628 aa13.28□□□□□ -0.28
GNPTAB-209ENST00000552009 LRCH3Q96II8 777 aa13.28□□□□□ -0.28
GNPTAB-209ENST00000552009 NYAP1Q6ZVC0 841 aa13.27□□□□□ -0.29
GNPTAB-209ENST00000552009 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.27□□□□□ -0.29
GNPTAB-209ENST00000552009 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
GNPTAB-209ENST00000552009 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
GNPTAB-209ENST00000552009 RBM27Q9P2N5 1060 aaKnown RBP13.26□□□□□ -0.29
GNPTAB-209ENST00000552009 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
GNPTAB-209ENST00000552009 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
GNPTAB-209ENST00000552009 CUX2O14529 1486 aa13.23□□□□□ -0.29
GNPTAB-209ENST00000552009 MLLT3P42568 568 aaPredicted RBP13.23□□□□□ -0.29
GNPTAB-209ENST00000552009 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
GNPTAB-209ENST00000552009 TATDN2Q93075 761 aa13.23□□□□□ -0.29
GNPTAB-209ENST00000552009 TSR3Q9UJK0 312 aaKnown RBP13.22□□□□□ -0.29
GNPTAB-209ENST00000552009 SMAPO00193 183 aa13.2□□□□□ -0.3
GNPTAB-209ENST00000552009 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
GNPTAB-209ENST00000552009 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
GNPTAB-209ENST00000552009 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
GNPTAB-209ENST00000552009 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
GNPTAB-209ENST00000552009 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
GNPTAB-209ENST00000552009 NUDT18Q6ZVK8 323 aa13.18□□□□□ -0.3
GNPTAB-209ENST00000552009 PPP4CP60510 307 aa13.17□□□□□ -0.3
GNPTAB-209ENST00000552009 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
GNPTAB-209ENST00000552009 SAMD7Q7Z3H4 446 aa13.16□□□□□ -0.3
GNPTAB-209ENST00000552009 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
GNPTAB-209ENST00000552009 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
GNPTAB-209ENST00000552009 SLC4A3P48751 1232 aa13.14□□□□□ -0.31
GNPTAB-209ENST00000552009 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
GNPTAB-209ENST00000552009 SEMA3EO15041 775 aa13.13□□□□□ -0.31
GNPTAB-209ENST00000552009 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
GNPTAB-209ENST00000552009 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
GNPTAB-209ENST00000552009 WIZO95785 1651 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms