RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 NBR1Q14596 966 aa15.75■□□□□ 0.11
NR4A1-215ENST00000550557 PROSER2Q86WR7 435 aaPredicted RBP15.75■□□□□ 0.11
NR4A1-215ENST00000550557 PPP4R2Q9NY27 417 aa15.75■□□□□ 0.11
NR4A1-215ENST00000550557 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
NR4A1-215ENST00000550557 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
NR4A1-215ENST00000550557 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
NR4A1-215ENST00000550557 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
NR4A1-215ENST00000550557 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
NR4A1-215ENST00000550557 KTN1Q86UP2 1357 aaKnown RBP15.72■□□□□ 0.11
NR4A1-215ENST00000550557 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
NR4A1-215ENST00000550557 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.11
NR4A1-215ENST00000550557 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
NR4A1-215ENST00000550557 HECW1Q76N89 1606 aa15.7■□□□□ 0.1
NR4A1-215ENST00000550557 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
NR4A1-215ENST00000550557 COG3Q96JB2 828 aa15.7■□□□□ 0.1
NR4A1-215ENST00000550557 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
NR4A1-215ENST00000550557 CALD1Q05682 793 aaKnown RBP15.7■□□□□ 0.1
NR4A1-215ENST00000550557 MS4A1P11836 297 aa15.69■□□□□ 0.1
NR4A1-215ENST00000550557 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
NR4A1-215ENST00000550557 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
NR4A1-215ENST00000550557 MSH5O43196 834 aa15.68■□□□□ 0.1
NR4A1-215ENST00000550557 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
NR4A1-215ENST00000550557 GTF2E1P29083 439 aaPredicted RBP15.67■□□□□ 0.1
NR4A1-215ENST00000550557 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
NR4A1-215ENST00000550557 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
NR4A1-215ENST00000550557 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
NR4A1-215ENST00000550557 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
NR4A1-215ENST00000550557 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
NR4A1-215ENST00000550557 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
NR4A1-215ENST00000550557 ST20-MTHFSA0A0A6YYL1 179 aa15.62■□□□□ 0.09
NR4A1-215ENST00000550557 PIP4K2BP78356 416 aa15.62■□□□□ 0.09
NR4A1-215ENST00000550557 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
NR4A1-215ENST00000550557 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
NR4A1-215ENST00000550557 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
NR4A1-215ENST00000550557 TROQ12816 1431 aaPredicted RBP15.61■□□□□ 0.09
NR4A1-215ENST00000550557 B4GALNT3Q6L9W6 998 aa15.61■□□□□ 0.09
NR4A1-215ENST00000550557 CASC1Q6TDU7 716 aa15.61■□□□□ 0.09
NR4A1-215ENST00000550557 STAC3Q96MF2 364 aa15.61■□□□□ 0.09
NR4A1-215ENST00000550557 ERICH6BQ5W0A0 696 aa15.61■□□□□ 0.09
NR4A1-215ENST00000550557 NAIPQ13075 1403 aa15.6■□□□□ 0.09
NR4A1-215ENST00000550557 RALBP1Q15311 655 aa15.6■□□□□ 0.09
NR4A1-215ENST00000550557 G3V3G9 751 aa15.59■□□□□ 0.09
NR4A1-215ENST00000550557 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
NR4A1-215ENST00000550557 DCAF8Q5TAQ9 597 aa15.59■□□□□ 0.09
NR4A1-215ENST00000550557 SLC52A1Q9NWF4 448 aa15.59■□□□□ 0.09
NR4A1-215ENST00000550557 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
NR4A1-215ENST00000550557 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.08
NR4A1-215ENST00000550557 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
NR4A1-215ENST00000550557 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
NR4A1-215ENST00000550557 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
NR4A1-215ENST00000550557 PRKRIP1Q9H875 184 aaPredicted RBP15.57■□□□□ 0.08
NR4A1-215ENST00000550557 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
NR4A1-215ENST00000550557 TMEM132EQ6IEE7 984 aa15.57■□□□□ 0.08
NR4A1-215ENST00000550557 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
NR4A1-215ENST00000550557 CENPJQ9HC77 1338 aaPredicted RBP15.57■□□□□ 0.08
NR4A1-215ENST00000550557 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
NR4A1-215ENST00000550557 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
NR4A1-215ENST00000550557 USP47Q96K76 1375 aa15.56■□□□□ 0.08
NR4A1-215ENST00000550557 NUTM2BA6NNL0 878 aaPredicted RBP15.56■□□□□ 0.08
NR4A1-215ENST00000550557 NUTM2EB1AL46 878 aaPredicted RBP15.56■□□□□ 0.08
NR4A1-215ENST00000550557 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
NR4A1-215ENST00000550557 NUTM2AQ8IVF1 878 aaPredicted RBP15.56■□□□□ 0.08
NR4A1-215ENST00000550557 TEFQ10587 303 aa15.55■□□□□ 0.08
NR4A1-215ENST00000550557 GLIPR1L2Q4G1C9 344 aa15.55■□□□□ 0.08
NR4A1-215ENST00000550557 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
NR4A1-215ENST00000550557 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
NR4A1-215ENST00000550557 KCNJ4P48050 445 aa15.54■□□□□ 0.08
NR4A1-215ENST00000550557 NLRP2Q9NX02 1062 aa15.54■□□□□ 0.08
NR4A1-215ENST00000550557 PTPN23Q9H3S7 1636 aa15.54■□□□□ 0.08
NR4A1-215ENST00000550557 NLRP6P59044 892 aa15.54■□□□□ 0.08
NR4A1-215ENST00000550557 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
NR4A1-215ENST00000550557 DAPK1P53355 1430 aa15.53■□□□□ 0.08
NR4A1-215ENST00000550557 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
NR4A1-215ENST00000550557 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
NR4A1-215ENST00000550557 CCDC7Q96M83 1385 aa15.53■□□□□ 0.08
NR4A1-215ENST00000550557 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
NR4A1-215ENST00000550557 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
NR4A1-215ENST00000550557 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
NR4A1-215ENST00000550557 FGD1P98174 961 aa15.52■□□□□ 0.08
NR4A1-215ENST00000550557 PANK3Q9H999 370 aa15.52■□□□□ 0.08
NR4A1-215ENST00000550557 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
NR4A1-215ENST00000550557 KLHL34Q8N239 644 aa15.52■□□□□ 0.07
NR4A1-215ENST00000550557 USP35Q9P2H5 1018 aa15.52■□□□□ 0.07
NR4A1-215ENST00000550557 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
NR4A1-215ENST00000550557 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
NR4A1-215ENST00000550557 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
NR4A1-215ENST00000550557 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
NR4A1-215ENST00000550557 EIF5BO60841 1220 aaKnown RBP15.51■□□□□ 0.07
NR4A1-215ENST00000550557 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
NR4A1-215ENST00000550557 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
NR4A1-215ENST00000550557 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
NR4A1-215ENST00000550557 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
NR4A1-215ENST00000550557 GORABQ5T7V8 394 aa15.49■□□□□ 0.07
NR4A1-215ENST00000550557 ABTB2Q8N961 1025 aa15.49■□□□□ 0.07
NR4A1-215ENST00000550557 TAOK2Q9UL54 1235 aa15.49■□□□□ 0.07
NR4A1-215ENST00000550557 CFAP43Q8NDM7 1665 aa15.48■□□□□ 0.07
NR4A1-215ENST00000550557 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
NR4A1-215ENST00000550557 CFAP70Q5T0N1 1121 aa15.48■□□□□ 0.07
NR4A1-215ENST00000550557 NLRP13Q86W25 1043 aa15.47■□□□□ 0.07
NR4A1-215ENST00000550557 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms