RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
TROAP-210ENST00000549534 KIF14Q15058 1648 aa18.15■□□□□ 0.5
TROAP-210ENST00000549534 LRRC9Q6ZRR7 1453 aa18.14■□□□□ 0.5
TROAP-210ENST00000549534 NLRP1Q9C000 1473 aa18.14■□□□□ 0.5
TROAP-210ENST00000549534 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
TROAP-210ENST00000549534 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
TROAP-210ENST00000549534 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
TROAP-210ENST00000549534 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
TROAP-210ENST00000549534 A2MP01023 1474 aa18.11■□□□□ 0.49
TROAP-210ENST00000549534 LRP6O75581 1613 aa18.1■□□□□ 0.49
TROAP-210ENST00000549534 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
TROAP-210ENST00000549534 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
TROAP-210ENST00000549534 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
TROAP-210ENST00000549534 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
TROAP-210ENST00000549534 CLIP1P30622 1438 aa18.08■□□□□ 0.49
TROAP-210ENST00000549534 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
TROAP-210ENST00000549534 PZPP20742 1482 aa18.07■□□□□ 0.48
TROAP-210ENST00000549534 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
TROAP-210ENST00000549534 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
TROAP-210ENST00000549534 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
TROAP-210ENST00000549534 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
TROAP-210ENST00000549534 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
TROAP-210ENST00000549534 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
TROAP-210ENST00000549534 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
TROAP-210ENST00000549534 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
TROAP-210ENST00000549534 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
TROAP-210ENST00000549534 RGS12O14924 1447 aa18.05■□□□□ 0.48
TROAP-210ENST00000549534 PHLPP1O60346 1717 aa18.03■□□□□ 0.48
TROAP-210ENST00000549534 TMEM94Q12767 1356 aa18.03■□□□□ 0.48
TROAP-210ENST00000549534 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
TROAP-210ENST00000549534 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.48
TROAP-210ENST00000549534 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
TROAP-210ENST00000549534 PREX2Q70Z35 1606 aa18.01■□□□□ 0.47
TROAP-210ENST00000549534 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
TROAP-210ENST00000549534 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
TROAP-210ENST00000549534 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
TROAP-210ENST00000549534 LRP5O75197 1615 aa17.97■□□□□ 0.47
TROAP-210ENST00000549534 SCAF11Q99590 1463 aaKnown RBP17.96■□□□□ 0.47
TROAP-210ENST00000549534 AFF2P51816 1311 aa17.96■□□□□ 0.46
TROAP-210ENST00000549534 MAP3K1Q13233 1512 aa17.94■□□□□ 0.46
TROAP-210ENST00000549534 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
TROAP-210ENST00000549534 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
TROAP-210ENST00000549534 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
TROAP-210ENST00000549534 MSH6P52701 1360 aa17.92■□□□□ 0.46
TROAP-210ENST00000549534 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
TROAP-210ENST00000549534 KCNA6P17658 529 aa17.91■□□□□ 0.46
TROAP-210ENST00000549534 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
TROAP-210ENST00000549534 KIAA1107Q9UPP5 1409 aa17.9■□□□□ 0.46
TROAP-210ENST00000549534 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
TROAP-210ENST00000549534 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
TROAP-210ENST00000549534 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
TROAP-210ENST00000549534 ABCC3O15438 1527 aa17.89■□□□□ 0.45
TROAP-210ENST00000549534 SYCP2Q9BX26 1530 aa17.89■□□□□ 0.45
TROAP-210ENST00000549534 YY1P25490 414 aa17.89■□□□□ 0.45
TROAP-210ENST00000549534 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.45
TROAP-210ENST00000549534 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
TROAP-210ENST00000549534 ADGBQ8N7X0 1667 aa17.88■□□□□ 0.45
TROAP-210ENST00000549534 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
TROAP-210ENST00000549534 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
TROAP-210ENST00000549534 LTKP29376 864 aa17.86■□□□□ 0.45
TROAP-210ENST00000549534 PLEKHH2Q8IVE3 1493 aa17.86■□□□□ 0.45
TROAP-210ENST00000549534 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
TROAP-210ENST00000549534 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
TROAP-210ENST00000549534 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
TROAP-210ENST00000549534 TIAM1Q13009 1591 aa17.83■□□□□ 0.45
TROAP-210ENST00000549534 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
TROAP-210ENST00000549534 SLIT1O75093 1534 aa17.83■□□□□ 0.45
TROAP-210ENST00000549534 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
TROAP-210ENST00000549534 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.44
TROAP-210ENST00000549534 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
TROAP-210ENST00000549534 KIF3BO15066 747 aa17.81■□□□□ 0.44
TROAP-210ENST00000549534 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
TROAP-210ENST00000549534 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
TROAP-210ENST00000549534 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
TROAP-210ENST00000549534 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
TROAP-210ENST00000549534 C8orf37Q96NL8 207 aa17.77■□□□□ 0.44
TROAP-210ENST00000549534 UBR1Q8IWV7 1749 aa17.75■□□□□ 0.43
TROAP-210ENST00000549534 EP400Q96L91 3159 aa17.75■□□□□ 0.43
TROAP-210ENST00000549534 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
TROAP-210ENST00000549534 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
TROAP-210ENST00000549534 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
TROAP-210ENST00000549534 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
TROAP-210ENST00000549534 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
TROAP-210ENST00000549534 TRPC5Q9UL62 973 aaPredicted RBP17.71■□□□□ 0.43
TROAP-210ENST00000549534 HRCP23327 699 aa17.7■□□□□ 0.42
TROAP-210ENST00000549534 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
TROAP-210ENST00000549534 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
TROAP-210ENST00000549534 SETD5Q9C0A6 1442 aa17.7■□□□□ 0.42
TROAP-210ENST00000549534 KDM5AP29375 1690 aaKnown RBP17.7■□□□□ 0.42
TROAP-210ENST00000549534 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
TROAP-210ENST00000549534 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
TROAP-210ENST00000549534 SLC26A8Q96RN1 970 aa17.67■□□□□ 0.42
TROAP-210ENST00000549534 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
TROAP-210ENST00000549534 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
TROAP-210ENST00000549534 TET3O43151 1660 aa17.65■□□□□ 0.42
TROAP-210ENST00000549534 CAMSAP2Q08AD1 1489 aa17.65■□□□□ 0.42
TROAP-210ENST00000549534 USP21Q9UK80 565 aa17.64■□□□□ 0.41
TROAP-210ENST00000549534 SF3B2Q13435 895 aaKnown RBP17.63■□□□□ 0.41
TROAP-210ENST00000549534 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
TROAP-210ENST00000549534 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms