RNA–Protein interactions for RNA: ENST00000549140.1

LINC02394-201, Transcript of long intergenic non-protein coding RNA 2394, humanhuman

TSL 4 BASIC

Gene LINC02394, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02394-201ENST00000549140 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
LINC02394-201ENST00000549140 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
LINC02394-201ENST00000549140 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
LINC02394-201ENST00000549140 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
LINC02394-201ENST00000549140 MAP3K7O43318 606 aa12.27□□□□□ -0.45
LINC02394-201ENST00000549140 OSBPP22059 807 aa12.26□□□□□ -0.45
LINC02394-201ENST00000549140 C6orf132Q5T0Z8 1188 aa12.26□□□□□ -0.45
LINC02394-201ENST00000549140 DMRTA1Q5VZB9 504 aa12.25□□□□□ -0.45
LINC02394-201ENST00000549140 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
LINC02394-201ENST00000549140 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
LINC02394-201ENST00000549140 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
LINC02394-201ENST00000549140 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
LINC02394-201ENST00000549140 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.45
LINC02394-201ENST00000549140 TK2O00142 265 aa12.2□□□□□ -0.46
LINC02394-201ENST00000549140 ADGRD1Q6QNK2 874 aa12.2□□□□□ -0.46
LINC02394-201ENST00000549140 COL9A1P20849 921 aa12.19□□□□□ -0.46
LINC02394-201ENST00000549140 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
LINC02394-201ENST00000549140 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
LINC02394-201ENST00000549140 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
LINC02394-201ENST00000549140 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
LINC02394-201ENST00000549140 CERKQ8TCT0 537 aa12.15□□□□□ -0.46
LINC02394-201ENST00000549140 CDHR5Q9HBB8 845 aa12.14□□□□□ -0.47
LINC02394-201ENST00000549140 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
LINC02394-201ENST00000549140 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
LINC02394-201ENST00000549140 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
LINC02394-201ENST00000549140 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
LINC02394-201ENST00000549140 HRO43593 1189 aa12.11□□□□□ -0.47
LINC02394-201ENST00000549140 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
LINC02394-201ENST00000549140 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
LINC02394-201ENST00000549140 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
LINC02394-201ENST00000549140 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
LINC02394-201ENST00000549140 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
LINC02394-201ENST00000549140 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
LINC02394-201ENST00000549140 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
LINC02394-201ENST00000549140 PRSS12P56730 875 aa12.07□□□□□ -0.48
LINC02394-201ENST00000549140 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
LINC02394-201ENST00000549140 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
LINC02394-201ENST00000549140 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
LINC02394-201ENST00000549140 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
LINC02394-201ENST00000549140 PTGDRQ13258 359 aa12.05□□□□□ -0.48
LINC02394-201ENST00000549140 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
LINC02394-201ENST00000549140 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
LINC02394-201ENST00000549140 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
LINC02394-201ENST00000549140 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
LINC02394-201ENST00000549140 FCHSD2O94868 740 aa12.03□□□□□ -0.48
LINC02394-201ENST00000549140 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.49
LINC02394-201ENST00000549140 GOLGA8CPA6NN73 597 aa12□□□□□ -0.49
LINC02394-201ENST00000549140 PADI6Q6TGC4 694 aa12□□□□□ -0.49
LINC02394-201ENST00000549140 GPIHBP1Q8IV16 184 aa12□□□□□ -0.49
LINC02394-201ENST00000549140 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
LINC02394-201ENST00000549140 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC02394-201ENST00000549140 LAPTM4BQ86VI4 370 aa11.98□□□□□ -0.49
LINC02394-201ENST00000549140 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
LINC02394-201ENST00000549140 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
LINC02394-201ENST00000549140 HIC1Q14526 733 aa11.97□□□□□ -0.49
LINC02394-201ENST00000549140 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
LINC02394-201ENST00000549140 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
LINC02394-201ENST00000549140 TATDN2Q93075 761 aa11.95□□□□□ -0.5
LINC02394-201ENST00000549140 BCANQ96GW7 911 aa11.95□□□□□ -0.5
LINC02394-201ENST00000549140 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
LINC02394-201ENST00000549140 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
LINC02394-201ENST00000549140 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
LINC02394-201ENST00000549140 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
LINC02394-201ENST00000549140 SMAPO00193 183 aa11.93□□□□□ -0.5
LINC02394-201ENST00000549140 GNPATO15228 680 aa11.93□□□□□ -0.5
LINC02394-201ENST00000549140 GPR37O15354 613 aa11.93□□□□□ -0.5
LINC02394-201ENST00000549140 WNT2BQ93097 391 aa11.93□□□□□ -0.5
LINC02394-201ENST00000549140 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
LINC02394-201ENST00000549140 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
LINC02394-201ENST00000549140 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
LINC02394-201ENST00000549140 FECHP22830 423 aa11.87□□□□□ -0.51
LINC02394-201ENST00000549140 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
LINC02394-201ENST00000549140 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
LINC02394-201ENST00000549140 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
LINC02394-201ENST00000549140 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
LINC02394-201ENST00000549140 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
LINC02394-201ENST00000549140 EYA1Q99502 592 aa11.85□□□□□ -0.51
LINC02394-201ENST00000549140 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
LINC02394-201ENST00000549140 OATP04181 439 aa11.84□□□□□ -0.51
LINC02394-201ENST00000549140 PTPN5P54829 565 aa11.83□□□□□ -0.52
LINC02394-201ENST00000549140 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
LINC02394-201ENST00000549140 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
LINC02394-201ENST00000549140 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
LINC02394-201ENST00000549140 BCAMP50895 628 aa11.82□□□□□ -0.52
LINC02394-201ENST00000549140 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
LINC02394-201ENST00000549140 ZC3H15Q8WU90 426 aaKnown RBP11.8□□□□□ -0.52
LINC02394-201ENST00000549140 DNAJB2P25686 324 aa11.79□□□□□ -0.52
LINC02394-201ENST00000549140 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
LINC02394-201ENST00000549140 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
LINC02394-201ENST00000549140 RCCD1A6NED2 376 aa11.78□□□□□ -0.52
LINC02394-201ENST00000549140 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
LINC02394-201ENST00000549140 SWT1Q5T5J6 900 aaKnown RBP11.77□□□□□ -0.53
LINC02394-201ENST00000549140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
LINC02394-201ENST00000549140 SLC4A3P48751 1232 aa11.76□□□□□ -0.53
LINC02394-201ENST00000549140 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
LINC02394-201ENST00000549140 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
LINC02394-201ENST00000549140 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
LINC02394-201ENST00000549140 IRF6O14896 467 aa11.75□□□□□ -0.53
LINC02394-201ENST00000549140 RNF40O75150 1001 aa11.75□□□□□ -0.53
LINC02394-201ENST00000549140 KRI1Q8N9T8 703 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms