RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
CCDC59-203ENST00000548126 HRO43593 1189 aa13.29□□□□□ -0.28
CCDC59-203ENST00000548126 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
CCDC59-203ENST00000548126 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
CCDC59-203ENST00000548126 ZNF454Q8N9F8 522 aa13.27□□□□□ -0.29
CCDC59-203ENST00000548126 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
CCDC59-203ENST00000548126 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
CCDC59-203ENST00000548126 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
CCDC59-203ENST00000548126 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
CCDC59-203ENST00000548126 DDX27Q96GQ7 796 aaKnown RBP13.22□□□□□ -0.29
CCDC59-203ENST00000548126 PTPREP23469 700 aa13.21□□□□□ -0.29
CCDC59-203ENST00000548126 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
CCDC59-203ENST00000548126 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
CCDC59-203ENST00000548126 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
CCDC59-203ENST00000548126 SLC4A5Q9BY07 1137 aa13.2□□□□□ -0.3
CCDC59-203ENST00000548126 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
CCDC59-203ENST00000548126 CFTRP13569 1480 aa13.19□□□□□ -0.3
CCDC59-203ENST00000548126 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
CCDC59-203ENST00000548126 FOSBP53539 338 aa13.19□□□□□ -0.3
CCDC59-203ENST00000548126 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
CCDC59-203ENST00000548126 EVI5O60447 810 aa13.17□□□□□ -0.3
CCDC59-203ENST00000548126 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
CCDC59-203ENST00000548126 ANO8Q9HCE9 1232 aaPredicted RBP13.17□□□□□ -0.3
CCDC59-203ENST00000548126 RSF1Q96T23 1441 aaPredicted RBP13.16□□□□□ -0.3
CCDC59-203ENST00000548126 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
CCDC59-203ENST00000548126 GOLGA8CPA6NN73 597 aa13.15□□□□□ -0.3
CCDC59-203ENST00000548126 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
CCDC59-203ENST00000548126 MFSD10Q14728 455 aa13.12□□□□□ -0.31
CCDC59-203ENST00000548126 CHD1O14646 1710 aa13.11□□□□□ -0.31
CCDC59-203ENST00000548126 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
CCDC59-203ENST00000548126 WIZO95785 1651 aa13.09□□□□□ -0.31
CCDC59-203ENST00000548126 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
CCDC59-203ENST00000548126 PTPN5P54829 565 aa13.08□□□□□ -0.32
CCDC59-203ENST00000548126 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
CCDC59-203ENST00000548126 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
CCDC59-203ENST00000548126 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
CCDC59-203ENST00000548126 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
CCDC59-203ENST00000548126 WNT2BQ93097 391 aa13.04□□□□□ -0.32
CCDC59-203ENST00000548126 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
CCDC59-203ENST00000548126 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
CCDC59-203ENST00000548126 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■□□□□ 8.9
CCDC59-203ENST00000548126 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
CCDC59-203ENST00000548126 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
CCDC59-203ENST00000548126 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
CCDC59-203ENST00000548126 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
CCDC59-203ENST00000548126 PHF14O94880 888 aa12.98□□□□□ -0.33
CCDC59-203ENST00000548126 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
CCDC59-203ENST00000548126 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
CCDC59-203ENST00000548126 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
CCDC59-203ENST00000548126 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
CCDC59-203ENST00000548126 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
CCDC59-203ENST00000548126 RGS20O76081 388 aa12.95□□□□□ -0.34
CCDC59-203ENST00000548126 CLASP1Q7Z460 1538 aa12.94□□□□□ -0.34
CCDC59-203ENST00000548126 ANKK1Q8NFD2 765 aa12.94□□□□□ -0.34
CCDC59-203ENST00000548126 EPAS1Q99814 870 aa12.94□□□□□ -0.34
CCDC59-203ENST00000548126 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
CCDC59-203ENST00000548126 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
CCDC59-203ENST00000548126 LAPTM4BQ86VI4 370 aa12.91□□□□□ -0.34
CCDC59-203ENST00000548126 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
CCDC59-203ENST00000548126 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
CCDC59-203ENST00000548126 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
CCDC59-203ENST00000548126 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
CCDC59-203ENST00000548126 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
CCDC59-203ENST00000548126 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
CCDC59-203ENST00000548126 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
CCDC59-203ENST00000548126 DPYSL4O14531 572 aa12.86□□□□□ -0.35
CCDC59-203ENST00000548126 COL9A1P20849 921 aa12.86□□□□□ -0.35
CCDC59-203ENST00000548126 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
CCDC59-203ENST00000548126 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
CCDC59-203ENST00000548126 NYAP1Q6ZVC0 841 aa12.85□□□□□ -0.35
CCDC59-203ENST00000548126 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
CCDC59-203ENST00000548126 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.36
CCDC59-203ENST00000548126 A0A0G2JS52 829 aa12.83□□□□□ -0.36
CCDC59-203ENST00000548126 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
CCDC59-203ENST00000548126 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
CCDC59-203ENST00000548126 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
CCDC59-203ENST00000548126 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
CCDC59-203ENST00000548126 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
CCDC59-203ENST00000548126 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
CCDC59-203ENST00000548126 ZFRQ96KR1 1074 aaKnown RBP12.79□□□□□ -0.36
CCDC59-203ENST00000548126 SOGA1O94964 1423 aa12.79□□□□□ -0.36
CCDC59-203ENST00000548126 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
CCDC59-203ENST00000548126 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
CCDC59-203ENST00000548126 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
CCDC59-203ENST00000548126 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.37
CCDC59-203ENST00000548126 BCAMP50895 628 aa12.77□□□□□ -0.37
CCDC59-203ENST00000548126 DDX12PQ92771 950 aa12.77□□□□□ -0.37
CCDC59-203ENST00000548126 RBM33Q96EV2 1170 aaKnown RBP12.77□□□□□ -0.37
CCDC59-203ENST00000548126 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
CCDC59-203ENST00000548126 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
CCDC59-203ENST00000548126 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
CCDC59-203ENST00000548126 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
CCDC59-203ENST00000548126 IRX2Q9BZI1 471 aaPredicted RBP12.76□□□□□ -0.37
CCDC59-203ENST00000548126 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
CCDC59-203ENST00000548126 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
CCDC59-203ENST00000548126 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
CCDC59-203ENST00000548126 NBR1Q14596 966 aa12.74□□□□□ -0.37
CCDC59-203ENST00000548126 PACS2Q86VP3 889 aa12.74□□□□□ -0.37
CCDC59-203ENST00000548126 SEPT9Q9UHD8 586 aaPredicted RBP12.74□□□□□ -0.37
CCDC59-203ENST00000548126 MAP3K7O43318 606 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms