RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 EPAS1Q99814 870 aa9□□□□□ -0.97
CUL3-214ENST00000541548 SEMA3EO15041 775 aa8.99□□□□□ -0.97
CUL3-214ENST00000541548 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
CUL3-214ENST00000541548 HRO43593 1189 aa8.98□□□□□ -0.97
CUL3-214ENST00000541548 NBR1Q14596 966 aa8.98□□□□□ -0.97
CUL3-214ENST00000541548 TSR1Q2NL82 804 aaKnown RBP8.98□□□□□ -0.97
CUL3-214ENST00000541548 C6orf132Q5T0Z8 1188 aa8.97□□□□□ -0.97
CUL3-214ENST00000541548 ZBED2Q9BTP6 218 aa8.97□□□□□ -0.97
CUL3-214ENST00000541548 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
CUL3-214ENST00000541548 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
CUL3-214ENST00000541548 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
CUL3-214ENST00000541548 SLC4A5Q9BY07 1137 aa8.96□□□□□ -0.98
CUL3-214ENST00000541548 PPP1R3GB7ZBB8 358 aa8.95□□□□□ -0.98
CUL3-214ENST00000541548 TK2O00142 265 aa8.95□□□□□ -0.98
CUL3-214ENST00000541548 PTPREP23469 700 aa8.95□□□□□ -0.98
CUL3-214ENST00000541548 CDHR5Q9HBB8 845 aa8.95□□□□□ -0.98
CUL3-214ENST00000541548 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
CUL3-214ENST00000541548 ANKRD13DQ6ZTN6 518 aa8.94□□□□□ -0.98
CUL3-214ENST00000541548 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
CUL3-214ENST00000541548 NPDC1Q9NQX5 325 aaPredicted RBP8.93□□□□□ -0.98
CUL3-214ENST00000541548 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
CUL3-214ENST00000541548 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
CUL3-214ENST00000541548 FAM198AQ9UFP1 575 aa8.91□□□□□ -0.98
CUL3-214ENST00000541548 MAP3K7O43318 606 aa8.9□□□□□ -0.98
CUL3-214ENST00000541548 C3orf80F5H4A9 247 aa8.89□□□□□ -0.99
CUL3-214ENST00000541548 GPR37O15354 613 aa8.89□□□□□ -0.99
CUL3-214ENST00000541548 TTC13Q8NBP0 860 aa8.87□□□□□ -0.99
CUL3-214ENST00000541548 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
CUL3-214ENST00000541548 TRIM6-TRIM34B2RNG4 842 aa8.85□□□□□ -0.99
CUL3-214ENST00000541548 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
CUL3-214ENST00000541548 SLC24A1O60721 1099 aa8.84□□□□□ -0.99
CUL3-214ENST00000541548 MYT1LQ9UL68 1186 aa8.84□□□□□ -0.99
CUL3-214ENST00000541548 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
CUL3-214ENST00000541548 PTGDRQ13258 359 aa8.83□□□□□ -1
CUL3-214ENST00000541548 KCNH8Q96L42 1107 aa8.83□□□□□ -1
CUL3-214ENST00000541548 RABGEF1Q9UJ41 708 aa8.83□□□□□ -1
CUL3-214ENST00000541548 PRSS12P56730 875 aa8.82□□□□□ -1
CUL3-214ENST00000541548 CDCA7LQ96GN5 454 aa8.82□□□□□ -1
CUL3-214ENST00000541548 RNF166Q96A37 237 aaPredicted RBP8.81□□□□□ -1
CUL3-214ENST00000541548 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
CUL3-214ENST00000541548 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
CUL3-214ENST00000541548 CERKQ8TCT0 537 aa8.8□□□□□ -1
CUL3-214ENST00000541548 PADI6Q6TGC4 694 aa8.79□□□□□ -1
CUL3-214ENST00000541548 SEPT9Q9UHD8 586 aaPredicted RBP8.77□□□□□ -1.01
CUL3-214ENST00000541548 FECHP22830 423 aa8.75□□□□□ -1.01
CUL3-214ENST00000541548 NUTM2FA1L443 756 aa8.74□□□□□ -1.01
CUL3-214ENST00000541548 SMAPO00193 183 aa8.74□□□□□ -1.01
CUL3-214ENST00000541548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
CUL3-214ENST00000541548 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
CUL3-214ENST00000541548 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
CUL3-214ENST00000541548 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
CUL3-214ENST00000541548 FCHSD2O94868 740 aa8.72□□□□□ -1.01
CUL3-214ENST00000541548 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
CUL3-214ENST00000541548 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
CUL3-214ENST00000541548 TATDN2Q93075 761 aa8.72□□□□□ -1.01
CUL3-214ENST00000541548 ZFRQ96KR1 1074 aaKnown RBP8.72□□□□□ -1.01
CUL3-214ENST00000541548 EYA1Q99502 592 aa8.72□□□□□ -1.01
CUL3-214ENST00000541548 ADGRG1Q9Y653 693 aa8.72□□□□□ -1.01
CUL3-214ENST00000541548 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.02
CUL3-214ENST00000541548 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
CUL3-214ENST00000541548 HIC1Q14526 733 aa8.7□□□□□ -1.02
CUL3-214ENST00000541548 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
CUL3-214ENST00000541548 NUDT18Q6ZVK8 323 aa8.7□□□□□ -1.02
CUL3-214ENST00000541548 PACS2Q86VP3 889 aa8.7□□□□□ -1.02
CUL3-214ENST00000541548 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
CUL3-214ENST00000541548 NBPF26B4DH59 902 aa8.68□□□□□ -1.02
CUL3-214ENST00000541548 GNPATO15228 680 aa8.68□□□□□ -1.02
CUL3-214ENST00000541548 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
CUL3-214ENST00000541548 BCAMP50895 628 aa8.67□□□□□ -1.02
CUL3-214ENST00000541548 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
CUL3-214ENST00000541548 WNT2BQ93097 391 aa8.67□□□□□ -1.02
CUL3-214ENST00000541548 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
CUL3-214ENST00000541548 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
CUL3-214ENST00000541548 SAMD7Q7Z3H4 446 aa8.64□□□□□ -1.03
CUL3-214ENST00000541548 PXYLP1Q8TE99 480 aa8.64□□□□□ -1.03
CUL3-214ENST00000541548 METTL3Q86U44 580 aaKnown RBP8.63□□□□□ -1.03
CUL3-214ENST00000541548 ANKK1Q8NFD2 765 aa8.63□□□□□ -1.03
CUL3-214ENST00000541548 HCSTQ9UBK5 93 aa8.62□□□□□ -1.03
CUL3-214ENST00000541548 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
CUL3-214ENST00000541548 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
CUL3-214ENST00000541548 WBP1LQ9NX94 342 aa8.61□□□□□ -1.03
CUL3-214ENST00000541548 RCCD1A6NED2 376 aa8.6□□□□□ -1.03
CUL3-214ENST00000541548 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
CUL3-214ENST00000541548 ZC3H15Q8WU90 426 aaKnown RBP8.6□□□□□ -1.03
CUL3-214ENST00000541548 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
CUL3-214ENST00000541548 ZMYND10O75800 440 aa8.59□□□□□ -1.03
CUL3-214ENST00000541548 PTPN5P54829 565 aa8.59□□□□□ -1.03
CUL3-214ENST00000541548 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
CUL3-214ENST00000541548 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
CUL3-214ENST00000541548 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
CUL3-214ENST00000541548 NLRP7Q8WX94 980 aa8.58□□□□□ -1.04
CUL3-214ENST00000541548 LRCH3Q96II8 777 aa8.58□□□□□ -1.04
CUL3-214ENST00000541548 DNAJB2P25686 324 aa8.57□□□□□ -1.04
CUL3-214ENST00000541548 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
CUL3-214ENST00000541548 IRF6O14896 467 aa8.56□□□□□ -1.04
CUL3-214ENST00000541548 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
CUL3-214ENST00000541548 TSR3Q9UJK0 312 aaKnown RBP8.56□□□□□ -1.04
CUL3-214ENST00000541548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.55□□□□□ -1.04
CUL3-214ENST00000541548 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
CUL3-214ENST00000541548 OATP04181 439 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms