RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 FBXW7Q969H0 707 aa7.9□□□□□ -1.14
AC055720.1-201ENST00000539552 GFRA3O60609 400 aa7.89□□□□□ -1.15
AC055720.1-201ENST00000539552 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
AC055720.1-201ENST00000539552 DDX27Q96GQ7 796 aaKnown RBP7.89□□□□□ -1.15
AC055720.1-201ENST00000539552 ZFRQ96KR1 1074 aaKnown RBP7.89□□□□□ -1.15
AC055720.1-201ENST00000539552 RTN4Q9NQC3 1192 aaKnown RBP7.89□□□□□ -1.15
AC055720.1-201ENST00000539552 TYW1BQ6NUM6 668 aa7.88□□□□□ -1.15
AC055720.1-201ENST00000539552 LRCH3Q96II8 777 aa7.87□□□□□ -1.15
AC055720.1-201ENST00000539552 LARP6Q9BRS8 491 aaKnown RBP7.87□□□□□ -1.15
AC055720.1-201ENST00000539552 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
AC055720.1-201ENST00000539552 KIAA1468Q9P260 1216 aa7.87□□□□□ -1.15
AC055720.1-201ENST00000539552 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.86□□□□□ -1.15
AC055720.1-201ENST00000539552 TSR3Q9UJK0 312 aaKnown RBP7.86□□□□□ -1.15
AC055720.1-201ENST00000539552 ONECUT3O60422 494 aaPredicted RBP7.84□□□□□ -1.15
AC055720.1-201ENST00000539552 PHF14O94880 888 aa7.84□□□□□ -1.15
AC055720.1-201ENST00000539552 SEPT9Q9UHD8 586 aaPredicted RBP7.84□□□□□ -1.15
AC055720.1-201ENST00000539552 HPS5Q9UPZ3 1129 aa7.84□□□□□ -1.15
AC055720.1-201ENST00000539552 PCDHGA10Q9Y5H3 936 aa7.84□□□□□ -1.15
AC055720.1-201ENST00000539552 COL9A1P20849 921 aa7.83□□□□□ -1.16
AC055720.1-201ENST00000539552 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
AC055720.1-201ENST00000539552 NCKAP5LQ9HCH0 1330 aa7.81□□□□□ -1.16
AC055720.1-201ENST00000539552 PPP4CP60510 307 aa7.81□□□□□ -1.16
AC055720.1-201ENST00000539552 NRG2O14511 850 aaPredicted RBP7.8□□□□□ -1.16
AC055720.1-201ENST00000539552 EPAS1Q99814 870 aa7.8□□□□□ -1.16
AC055720.1-201ENST00000539552 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
AC055720.1-201ENST00000539552 PRKD2Q9BZL6 878 aa7.79□□□□□ -1.16
AC055720.1-201ENST00000539552 C6orf132Q5T0Z8 1188 aa7.78□□□□□ -1.16
AC055720.1-201ENST00000539552 ZNF787Q6DD87 383 aa7.78□□□□□ -1.16
AC055720.1-201ENST00000539552 PACS2Q86VP3 889 aa7.78□□□□□ -1.16
AC055720.1-201ENST00000539552 NKX1-1Q15270 411 aaPredicted RBP7.77□□□□□ -1.17
AC055720.1-201ENST00000539552 HDGFP51858 240 aaKnown RBP7.75□□□□□ -1.17
AC055720.1-201ENST00000539552 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
AC055720.1-201ENST00000539552 MFSD10Q14728 455 aa7.74□□□□□ -1.17
AC055720.1-201ENST00000539552 EMILIN3Q9NT22 766 aa7.74□□□□□ -1.17
AC055720.1-201ENST00000539552 V9GY48 417 aaPredicted RBP7.74□□□□□ -1.17
AC055720.1-201ENST00000539552 GGCXP38435 758 aa7.73□□□□□ -1.17
AC055720.1-201ENST00000539552 IL21Q9HBE4 155 aa7.73□□□□□ -1.17
AC055720.1-201ENST00000539552 PDZRN3Q9UPQ7 1066 aa7.72□□□□□ -1.17
AC055720.1-201ENST00000539552 RNF40O75150 1001 aa7.71□□□□□ -1.18
AC055720.1-201ENST00000539552 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
AC055720.1-201ENST00000539552 MAP3K7O43318 606 aa7.69□□□□□ -1.18
AC055720.1-201ENST00000539552 NECTIN2Q92692 538 aa7.69□□□□□ -1.18
AC055720.1-201ENST00000539552 MTRQ99707 1265 aa7.69□□□□□ -1.18
AC055720.1-201ENST00000539552 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.69□□□□□ -1.18
AC055720.1-201ENST00000539552 TJAP1Q5JTD0 557 aa7.68□□□□□ -1.18
AC055720.1-201ENST00000539552 DPYSL4O14531 572 aa7.67□□□□□ -1.18
AC055720.1-201ENST00000539552 LCE2BO14633 110 aa7.67□□□□□ -1.18
AC055720.1-201ENST00000539552 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
AC055720.1-201ENST00000539552 DDX12PQ92771 950 aa7.67□□□□□ -1.18
AC055720.1-201ENST00000539552 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
AC055720.1-201ENST00000539552 SLC4A3P48751 1232 aa7.66□□□□□ -1.18
AC055720.1-201ENST00000539552 NBR1Q14596 966 aa7.66□□□□□ -1.18
AC055720.1-201ENST00000539552 NBPF26B4DH59 902 aa7.65□□□□□ -1.18
AC055720.1-201ENST00000539552 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.18
AC055720.1-201ENST00000539552 CERKQ8TCT0 537 aa7.64□□□□□ -1.19
AC055720.1-201ENST00000539552 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
AC055720.1-201ENST00000539552 TSKSQ9UJT2 592 aa7.64□□□□□ -1.19
AC055720.1-201ENST00000539552 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
AC055720.1-201ENST00000539552 PKDCCQ504Y2 493 aa7.63□□□□□ -1.19
AC055720.1-201ENST00000539552 SMAPO00193 183 aa7.62□□□□□ -1.19
AC055720.1-201ENST00000539552 CDCA7LQ96GN5 454 aa7.62□□□□□ -1.19
AC055720.1-201ENST00000539552 PNMA3Q9UL41 463 aa7.62□□□□□ -1.19
AC055720.1-201ENST00000539552 PRSS12P56730 875 aa7.6□□□□□ -1.19
AC055720.1-201ENST00000539552 TSR1Q2NL82 804 aaKnown RBP7.6□□□□□ -1.19
AC055720.1-201ENST00000539552 CAMK2BQ13554 666 aa7.59□□□□□ -1.19
AC055720.1-201ENST00000539552 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
AC055720.1-201ENST00000539552 TATDN2Q93075 761 aa7.59□□□□□ -1.19
AC055720.1-201ENST00000539552 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
AC055720.1-201ENST00000539552 COPS2P61201 443 aa7.58□□□□□ -1.2
AC055720.1-201ENST00000539552 SLF2Q8IX21 1173 aa7.57□□□□□ -1.2
AC055720.1-201ENST00000539552 PRR14Q9BWN1 585 aa7.57□□□□□ -1.2
AC055720.1-201ENST00000539552 SPDYE16A6NNV3 312 aaPredicted RBP7.55□□□□□ -1.2
AC055720.1-201ENST00000539552 APLP1P51693 650 aa7.55□□□□□ -1.2
AC055720.1-201ENST00000539552 DGAT1O75907 488 aa7.54□□□□□ -1.2
AC055720.1-201ENST00000539552 SLC19A1P41440 591 aa7.54□□□□□ -1.2
AC055720.1-201ENST00000539552 NUDT18Q6ZVK8 323 aa7.54□□□□□ -1.2
AC055720.1-201ENST00000539552 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
AC055720.1-201ENST00000539552 CADPS2Q86UW7 1296 aa7.53□□□□□ -1.2
AC055720.1-201ENST00000539552 PDIA6Q15084 440 aa7.52□□□□□ -1.21
AC055720.1-201ENST00000539552 GRXCR2A6NFK2 248 aa7.51□□□□□ -1.21
AC055720.1-201ENST00000539552 FAM187AA6NFU0 413 aa7.51□□□□□ -1.21
AC055720.1-201ENST00000539552 ZPR1O75312 459 aa7.51□□□□□ -1.21
AC055720.1-201ENST00000539552 PCDHB3Q9Y5E6 796 aa7.51□□□□□ -1.21
AC055720.1-201ENST00000539552 RBM27Q9P2N5 1060 aaKnown RBP7.5□□□□□ -1.21
AC055720.1-201ENST00000539552 MYT1Q01538 1121 aa7.49□□□□□ -1.21
AC055720.1-201ENST00000539552 SWT1Q5T5J6 900 aaKnown RBP7.49□□□□□ -1.21
AC055720.1-201ENST00000539552 ZNF598Q86UK7 904 aaKnown RBP7.48□□□□□ -1.21
AC055720.1-201ENST00000539552 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
AC055720.1-201ENST00000539552 SPRYD7Q5W111 196 aa7.47□□□□□ -1.21
AC055720.1-201ENST00000539552 RNF223E7ERA6 249 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 PRR20EP86478 221 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 PRR20CP86479 221 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 PRR20DP86480 221 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 PRR20BP86481 221 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 PRR20AP86496 221 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
AC055720.1-201ENST00000539552 ANKLE1Q8NAG6 615 aa7.45□□□□□ -1.22
AC055720.1-201ENST00000539552 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
AC055720.1-201ENST00000539552 WDR70Q9NW82 654 aa7.44□□□□□ -1.22
AC055720.1-201ENST00000539552 TNFRSF10AO00220 468 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms