RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
DDB1-211ENST00000538280 ARHGEF5Q12774 1597 aa13.17□□□□□ -0.3
DDB1-211ENST00000538280 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
DDB1-211ENST00000538280 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
DDB1-211ENST00000538280 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
DDB1-211ENST00000538280 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
DDB1-211ENST00000538280 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
DDB1-211ENST00000538280 KDM5DQ9BY66 1539 aa13.15□□□□□ -0.3
DDB1-211ENST00000538280 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
DDB1-211ENST00000538280 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
DDB1-211ENST00000538280 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
DDB1-211ENST00000538280 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
DDB1-211ENST00000538280 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
DDB1-211ENST00000538280 SETD1BQ9UPS6 1966 aaKnown RBP13.12□□□□□ -0.31
DDB1-211ENST00000538280 MLH3Q9UHC1 1453 aa13.12□□□□□ -0.31
DDB1-211ENST00000538280 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
DDB1-211ENST00000538280 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
DDB1-211ENST00000538280 AGLP35573 1532 aa13.12□□□□□ -0.31
DDB1-211ENST00000538280 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
DDB1-211ENST00000538280 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
DDB1-211ENST00000538280 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
DDB1-211ENST00000538280 MROH2AA6NES4 1674 aa13.1□□□□□ -0.31
DDB1-211ENST00000538280 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
DDB1-211ENST00000538280 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
DDB1-211ENST00000538280 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
DDB1-211ENST00000538280 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
DDB1-211ENST00000538280 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.31
DDB1-211ENST00000538280 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.31
DDB1-211ENST00000538280 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
DDB1-211ENST00000538280 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
DDB1-211ENST00000538280 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
DDB1-211ENST00000538280 PTPRTO14522 1441 aa13.07□□□□□ -0.32
DDB1-211ENST00000538280 CAMSAP1Q5T5Y3 1602 aa13.07□□□□□ -0.32
DDB1-211ENST00000538280 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
DDB1-211ENST00000538280 ZNF142P52746 1687 aaPredicted RBP13.07□□□□□ -0.32
DDB1-211ENST00000538280 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
DDB1-211ENST00000538280 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
DDB1-211ENST00000538280 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
DDB1-211ENST00000538280 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
DDB1-211ENST00000538280 PLXNC1O60486 1568 aa13.05□□□□□ -0.32
DDB1-211ENST00000538280 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
DDB1-211ENST00000538280 HSPA5P11021 654 aaKnown RBP13.03□□□□□ -0.32
DDB1-211ENST00000538280 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
DDB1-211ENST00000538280 SPATA31E1Q6ZUB1 1445 aa13.03□□□□□ -0.32
DDB1-211ENST00000538280 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
DDB1-211ENST00000538280 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
DDB1-211ENST00000538280 UNC13BO14795 1591 aa13.02□□□□□ -0.33
DDB1-211ENST00000538280 FOXD1Q16676 465 aa13.01□□□□□ -0.33
DDB1-211ENST00000538280 CEP170BQ9Y4F5 1589 aaPredicted RBP13□□□□□ -0.33
DDB1-211ENST00000538280 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
DDB1-211ENST00000538280 ANP32CO43423 234 aa13□□□□□ -0.33
DDB1-211ENST00000538280 IQSEC2Q5JU85 1478 aa12.99□□□□□ -0.33
DDB1-211ENST00000538280 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
DDB1-211ENST00000538280 WASHC2AQ641Q2 1341 aa12.99□□□□□ -0.33
DDB1-211ENST00000538280 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDB1-211ENST00000538280 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
DDB1-211ENST00000538280 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
DDB1-211ENST00000538280 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
DDB1-211ENST00000538280 NPATQ14207 1427 aa12.98□□□□□ -0.33
DDB1-211ENST00000538280 SOCS7O14512 581 aa12.98□□□□□ -0.33
DDB1-211ENST00000538280 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
DDB1-211ENST00000538280 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
DDB1-211ENST00000538280 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
DDB1-211ENST00000538280 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
DDB1-211ENST00000538280 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
DDB1-211ENST00000538280 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
DDB1-211ENST00000538280 IQGAP3Q86VI3 1631 aa12.95□□□□□ -0.34
DDB1-211ENST00000538280 A2MP01023 1474 aa12.95□□□□□ -0.34
DDB1-211ENST00000538280 RALGAPBQ86X10 1494 aa12.95□□□□□ -0.34
DDB1-211ENST00000538280 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
DDB1-211ENST00000538280 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
DDB1-211ENST00000538280 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
DDB1-211ENST00000538280 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
DDB1-211ENST00000538280 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDB1-211ENST00000538280 PKD2Q13563 968 aa12.94□□□□□ -0.34
DDB1-211ENST00000538280 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
DDB1-211ENST00000538280 PLA2R1Q13018 1463 aa12.93□□□□□ -0.34
DDB1-211ENST00000538280 NUP155O75694 1391 aa12.93□□□□□ -0.34
DDB1-211ENST00000538280 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
DDB1-211ENST00000538280 SUPT16HQ9Y5B9 1047 aaKnown RBP12.91□□□□□ -0.34
DDB1-211ENST00000538280 DUOX2Q9NRD8 1548 aa12.91□□□□□ -0.34
DDB1-211ENST00000538280 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
DDB1-211ENST00000538280 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
DDB1-211ENST00000538280 LAMC1P11047 1609 aa12.88□□□□□ -0.35
DDB1-211ENST00000538280 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
DDB1-211ENST00000538280 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
DDB1-211ENST00000538280 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
DDB1-211ENST00000538280 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
DDB1-211ENST00000538280 GGT6Q6P531 493 aa12.87□□□□□ -0.35
DDB1-211ENST00000538280 TRPM1Q7Z4N2 1603 aa12.87□□□□□ -0.35
DDB1-211ENST00000538280 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
DDB1-211ENST00000538280 USP47Q96K76 1375 aa12.86□□□□□ -0.35
DDB1-211ENST00000538280 UBAP1LF5GYI3 381 aa12.86□□□□□ -0.35
DDB1-211ENST00000538280 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
DDB1-211ENST00000538280 E9PCH4 1651 aa12.85□□□□□ -0.35
DDB1-211ENST00000538280 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
DDB1-211ENST00000538280 RTEL1-TNFRSF6BF6WH68 1400 aa12.83□□□□□ -0.36
DDB1-211ENST00000538280 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
DDB1-211ENST00000538280 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
DDB1-211ENST00000538280 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms