RNA–Protein interactions for RNA: ENST00000533626.5

EIF3F-208, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EIF3F, Length 7,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-208ENST00000533626 TPM2P07951 284 aa11.29□□□□□ -0.6
EIF3F-208ENST00000533626 ZNF771Q7L3S4 317 aaPredicted RBP11.29□□□□□ -0.6
EIF3F-208ENST00000533626 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
EIF3F-208ENST00000533626 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
EIF3F-208ENST00000533626 FOSBP53539 338 aa11.28□□□□□ -0.6
EIF3F-208ENST00000533626 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
EIF3F-208ENST00000533626 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
EIF3F-208ENST00000533626 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
EIF3F-208ENST00000533626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.28□□□□□ -0.6
EIF3F-208ENST00000533626 PHF14O94880 888 aa11.27□□□□□ -0.61
EIF3F-208ENST00000533626 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
EIF3F-208ENST00000533626 CCDC70Q6NSX1 233 aa11.26□□□□□ -0.61
EIF3F-208ENST00000533626 AMPHP49418 695 aa11.25□□□□□ -0.61
EIF3F-208ENST00000533626 NAP1L1P55209 391 aaKnown RBP11.25□□□□□ -0.61
EIF3F-208ENST00000533626 HSP90AA2PQ14568 343 aaPredicted RBP11.25□□□□□ -0.61
EIF3F-208ENST00000533626 BECN2A8MW95 431 aa11.25□□□□□ -0.61
EIF3F-208ENST00000533626 TPM1P09493 284 aa11.25□□□□□ -0.61
EIF3F-208ENST00000533626 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
EIF3F-208ENST00000533626 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
EIF3F-208ENST00000533626 EVA1CP58658 441 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 KDM4AO75164 1064 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
EIF3F-208ENST00000533626 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 ST18O60284 1047 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 HMMRO75330 724 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 KTN1Q86UP2 1357 aaKnown RBP11.24□□□□□ -0.61
EIF3F-208ENST00000533626 ZFYVE27Q5T4F4 411 aa11.24□□□□□ -0.61
EIF3F-208ENST00000533626 ELL2O00472 640 aaPredicted RBP11.23□□□□□ -0.61
EIF3F-208ENST00000533626 SYTL4Q96C24 671 aaPredicted RBP11.23□□□□□ -0.61
EIF3F-208ENST00000533626 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
EIF3F-208ENST00000533626 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
EIF3F-208ENST00000533626 MTMR7Q9Y216 660 aa11.22□□□□□ -0.61
EIF3F-208ENST00000533626 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
EIF3F-208ENST00000533626 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
EIF3F-208ENST00000533626 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
EIF3F-208ENST00000533626 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
EIF3F-208ENST00000533626 ODF2Q5BJF6 829 aa11.22□□□□□ -0.61
EIF3F-208ENST00000533626 CCDC43Q96MW1 224 aaKnown RBP11.21□□□□□ -0.61
EIF3F-208ENST00000533626 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.61
EIF3F-208ENST00000533626 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.61
EIF3F-208ENST00000533626 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.62
EIF3F-208ENST00000533626 VPS37DQ86XT2 251 aa11.21□□□□□ -0.62
EIF3F-208ENST00000533626 HOMER1Q86YM7 354 aa11.21□□□□□ -0.62
EIF3F-208ENST00000533626 ROCK2O75116 1388 aaKnown RBP11.21□□□□□ -0.62
EIF3F-208ENST00000533626 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
EIF3F-208ENST00000533626 FYB1O15117 783 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 GPS2Q13227 327 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 ERCC6Q03468 1493 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 AMOTL1Q8IY63 956 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
EIF3F-208ENST00000533626 TRIM29Q14134 588 aa11.19□□□□□ -0.62
EIF3F-208ENST00000533626 DDX49Q9Y6V7 483 aaKnown RBP11.19□□□□□ -0.62
EIF3F-208ENST00000533626 PAF1Q8N7H5 531 aa11.19□□□□□ -0.62
EIF3F-208ENST00000533626 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
EIF3F-208ENST00000533626 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
EIF3F-208ENST00000533626 EIF2S2P20042 333 aaKnown RBP11.18□□□□□ -0.62
EIF3F-208ENST00000533626 TTLL5Q6EMB2 1281 aa11.18□□□□□ -0.62
EIF3F-208ENST00000533626 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
EIF3F-208ENST00000533626 HSP90AB2PQ58FF8 381 aa11.18□□□□□ -0.62
EIF3F-208ENST00000533626 PLCD4Q9BRC7 762 aa11.18□□□□□ -0.62
EIF3F-208ENST00000533626 MAP7D2Q96T17 732 aa11.17□□□□□ -0.62
EIF3F-208ENST00000533626 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
EIF3F-208ENST00000533626 RUFY1Q96T51 708 aa11.17□□□□□ -0.62
EIF3F-208ENST00000533626 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
EIF3F-208ENST00000533626 CEP162Q5TB80 1403 aa11.16□□□□□ -0.62
EIF3F-208ENST00000533626 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.16□□□□□ -0.62
EIF3F-208ENST00000533626 C1orf141Q5JVX7 400 aa11.15□□□□□ -0.62
EIF3F-208ENST00000533626 FAM13BQ9NYF5 915 aa11.15□□□□□ -0.62
EIF3F-208ENST00000533626 TMEM132AQ24JP5 1023 aa11.15□□□□□ -0.62
EIF3F-208ENST00000533626 EPS15P42566 896 aa11.15□□□□□ -0.62
EIF3F-208ENST00000533626 PKD2Q13563 968 aa11.15□□□□□ -0.62
EIF3F-208ENST00000533626 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
EIF3F-208ENST00000533626 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 CENPJQ9HC77 1338 aaPredicted RBP11.14□□□□□ -0.63
EIF3F-208ENST00000533626 CCDC47Q96A33 483 aaKnown RBP11.14□□□□□ -0.63
EIF3F-208ENST00000533626 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
EIF3F-208ENST00000533626 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 ANKRD20A12PQ8NF67 263 aa11.14□□□□□ -0.63
EIF3F-208ENST00000533626 PLIN1O60240 522 aa11.13□□□□□ -0.63
EIF3F-208ENST00000533626 TEX35Q5T0J7 233 aa11.13□□□□□ -0.63
EIF3F-208ENST00000533626 CPLX1O14810 134 aa11.13□□□□□ -0.63
EIF3F-208ENST00000533626 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
EIF3F-208ENST00000533626 GOLGA3Q08378 1498 aa11.13□□□□□ -0.63
EIF3F-208ENST00000533626 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
EIF3F-208ENST00000533626 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
EIF3F-208ENST00000533626 IKQ13123 557 aaPredicted RBP11.12□□□□□ -0.63
EIF3F-208ENST00000533626 PDILTQ8N807 584 aa11.12□□□□□ -0.63
EIF3F-208ENST00000533626 AK7Q96M32 723 aa11.12□□□□□ -0.63
EIF3F-208ENST00000533626 EID1Q9Y6B2 187 aa11.12□□□□□ -0.63
EIF3F-208ENST00000533626 ERICH2A1L162 156 aa11.11□□□□□ -0.63
EIF3F-208ENST00000533626 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
EIF3F-208ENST00000533626 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
EIF3F-208ENST00000533626 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
EIF3F-208ENST00000533626 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms