RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
PCDHA3-202ENST00000532566 RWDD1Q9H446 243 aaPredicted RBP19.53■□□□□ 0.72
PCDHA3-202ENST00000532566 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
PCDHA3-202ENST00000532566 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
PCDHA3-202ENST00000532566 SUPT6HQ7KZ85 1726 aaKnown RBP19.52■□□□□ 0.72
PCDHA3-202ENST00000532566 CENPJQ9HC77 1338 aaPredicted RBP19.52■□□□□ 0.72
PCDHA3-202ENST00000532566 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
PCDHA3-202ENST00000532566 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
PCDHA3-202ENST00000532566 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
PCDHA3-202ENST00000532566 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
PCDHA3-202ENST00000532566 A0A0G2JS52 829 aa19.51■□□□□ 0.71
PCDHA3-202ENST00000532566 NAIPQ13075 1403 aa19.5■□□□□ 0.71
PCDHA3-202ENST00000532566 RTF1Q92541 710 aaKnown RBP19.5■□□□□ 0.71
PCDHA3-202ENST00000532566 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
PCDHA3-202ENST00000532566 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
PCDHA3-202ENST00000532566 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
PCDHA3-202ENST00000532566 CUL7Q14999 1698 aa19.49■□□□□ 0.71
PCDHA3-202ENST00000532566 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
PCDHA3-202ENST00000532566 KIAA1107Q9UPP5 1409 aa19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 KIAA0586Q9BVV6 1533 aa19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
PCDHA3-202ENST00000532566 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 C9orf84Q5VXU9 1444 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 DAPK1P53355 1430 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
PCDHA3-202ENST00000532566 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
PCDHA3-202ENST00000532566 HSCBQ8IWL3 235 aa19.46■□□□□ 0.71
PCDHA3-202ENST00000532566 CLUAP1Q96AJ1 413 aa19.46■□□□□ 0.71
PCDHA3-202ENST00000532566 EXOC6Q8TAG9 804 aa19.44■□□□□ 0.7
PCDHA3-202ENST00000532566 IPO9Q96P70 1041 aaKnown RBP19.44■□□□□ 0.7
PCDHA3-202ENST00000532566 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
PCDHA3-202ENST00000532566 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
PCDHA3-202ENST00000532566 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
PCDHA3-202ENST00000532566 E9PSI1 815 aa19.43■□□□□ 0.7
PCDHA3-202ENST00000532566 RRP7AQ9Y3A4 280 aaKnown RBP19.43■□□□□ 0.7
PCDHA3-202ENST00000532566 PLIN1O60240 522 aa19.43■□□□□ 0.7
PCDHA3-202ENST00000532566 APAF1O14727 1248 aa19.43■□□□□ 0.7
PCDHA3-202ENST00000532566 OS9Q13438 667 aaPredicted RBP19.43■□□□□ 0.7
PCDHA3-202ENST00000532566 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
PCDHA3-202ENST00000532566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
PCDHA3-202ENST00000532566 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
PCDHA3-202ENST00000532566 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
PCDHA3-202ENST00000532566 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
PCDHA3-202ENST00000532566 DEKP35659 375 aaKnown RBP19.39■□□□□ 0.69
PCDHA3-202ENST00000532566 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
PCDHA3-202ENST00000532566 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.69
PCDHA3-202ENST00000532566 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
PCDHA3-202ENST00000532566 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
PCDHA3-202ENST00000532566 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
PCDHA3-202ENST00000532566 CRBNQ96SW2 442 aa19.37■□□□□ 0.69
PCDHA3-202ENST00000532566 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
PCDHA3-202ENST00000532566 PLEKHH2Q8IVE3 1493 aa19.36■□□□□ 0.69
PCDHA3-202ENST00000532566 MINK1Q8N4C8 1332 aaPredicted RBP19.36■□□□□ 0.69
PCDHA3-202ENST00000532566 NBPF1Q3BBV0 1214 aa19.35■□□□□ 0.69
PCDHA3-202ENST00000532566 URB2Q14146 1524 aaKnown RBP19.35■□□□□ 0.69
PCDHA3-202ENST00000532566 APBB1O00213 710 aa19.34■□□□□ 0.69
PCDHA3-202ENST00000532566 PDE4AP27815 886 aa19.34■□□□□ 0.69
PCDHA3-202ENST00000532566 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
PCDHA3-202ENST00000532566 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.69
PCDHA3-202ENST00000532566 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
PCDHA3-202ENST00000532566 PTPN23Q9H3S7 1636 aa19.33■□□□□ 0.68
PCDHA3-202ENST00000532566 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
PCDHA3-202ENST00000532566 KCNJ4P48050 445 aa19.31■□□□□ 0.68
PCDHA3-202ENST00000532566 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
PCDHA3-202ENST00000532566 MCCP23508 829 aa19.3■□□□□ 0.68
PCDHA3-202ENST00000532566 SLKQ9H2G2 1235 aaPredicted RBP19.3■□□□□ 0.68
PCDHA3-202ENST00000532566 CFAP70Q5T0N1 1121 aa19.3■□□□□ 0.68
PCDHA3-202ENST00000532566 ZKSCAN2Q63HK3 967 aa19.29■□□□□ 0.68
PCDHA3-202ENST00000532566 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
PCDHA3-202ENST00000532566 COG6Q9Y2V7 657 aa19.29■□□□□ 0.68
PCDHA3-202ENST00000532566 FANCIQ9NVI1 1328 aa19.28■□□□□ 0.68
PCDHA3-202ENST00000532566 MFAP1P55081 439 aaKnown RBP19.28■□□□□ 0.68
PCDHA3-202ENST00000532566 COG3Q96JB2 828 aa19.28■□□□□ 0.68
PCDHA3-202ENST00000532566 FAM161AQ3B820 660 aa19.27■□□□□ 0.68
PCDHA3-202ENST00000532566 ANKRD30BQ9BXX2 1392 aa19.27■□□□□ 0.68
PCDHA3-202ENST00000532566 ABCC5O15440 1437 aa19.27■□□□□ 0.68
PCDHA3-202ENST00000532566 AMPHP49418 695 aa19.27■□□□□ 0.68
PCDHA3-202ENST00000532566 ADAMTS8Q9UP79 889 aa19.27■□□□□ 0.68
PCDHA3-202ENST00000532566 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
PCDHA3-202ENST00000532566 PTMAP06454 111 aaKnown RBP19.26■□□□□ 0.67
PCDHA3-202ENST00000532566 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
PCDHA3-202ENST00000532566 PLB1Q6P1J6 1458 aa19.26■□□□□ 0.67
PCDHA3-202ENST00000532566 TPRNQ4KMQ1 711 aa19.25■□□□□ 0.67
PCDHA3-202ENST00000532566 DIAPH1O60610 1272 aaKnown RBP19.25■□□□□ 0.67
PCDHA3-202ENST00000532566 HMMRO75330 724 aa19.25■□□□□ 0.67
PCDHA3-202ENST00000532566 TMEM132EQ6IEE7 984 aa19.25■□□□□ 0.67
PCDHA3-202ENST00000532566 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
PCDHA3-202ENST00000532566 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
PCDHA3-202ENST00000532566 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
PCDHA3-202ENST00000532566 FGD1P98174 961 aa19.24■□□□□ 0.67
PCDHA3-202ENST00000532566 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
PCDHA3-202ENST00000532566 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
PCDHA3-202ENST00000532566 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
PCDHA3-202ENST00000532566 L1TD1Q5T7N2 865 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms