RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 BECN2A8MW95 431 aa11.63□□□□□ -0.55
CTNND1-213ENST00000526357 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
CTNND1-213ENST00000526357 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
CTNND1-213ENST00000526357 SLC4A10Q6U841 1118 aa11.63□□□□□ -0.55
CTNND1-213ENST00000526357 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
CTNND1-213ENST00000526357 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
CTNND1-213ENST00000526357 SYNE3Q6ZMZ3 975 aa11.63□□□□□ -0.55
CTNND1-213ENST00000526357 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
CTNND1-213ENST00000526357 IPO7O95373 1038 aaKnown RBP11.62□□□□□ -0.55
CTNND1-213ENST00000526357 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
CTNND1-213ENST00000526357 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
CTNND1-213ENST00000526357 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-213ENST00000526357 AMOTL1Q8IY63 956 aa11.61□□□□□ -0.55
CTNND1-213ENST00000526357 ANKRD20A12PQ8NF67 263 aa11.61□□□□□ -0.55
CTNND1-213ENST00000526357 ZNF771Q7L3S4 317 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-213ENST00000526357 CTDP1Q9Y5B0 961 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-213ENST00000526357 CDR1P51861 262 aa11.61□□□□□ -0.55
CTNND1-213ENST00000526357 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-213ENST00000526357 ROCK2O75116 1388 aaKnown RBP11.61□□□□□ -0.55
CTNND1-213ENST00000526357 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
CTNND1-213ENST00000526357 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
CTNND1-213ENST00000526357 TNIKQ9UKE5 1360 aa11.6□□□□□ -0.55
CTNND1-213ENST00000526357 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
CTNND1-213ENST00000526357 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
CTNND1-213ENST00000526357 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
CTNND1-213ENST00000526357 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
CTNND1-213ENST00000526357 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-213ENST00000526357 FOXD4L5Q5VV16 416 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-213ENST00000526357 FOXD4L4Q8WXT5 416 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-213ENST00000526357 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
CTNND1-213ENST00000526357 TRIM29Q14134 588 aa11.59□□□□□ -0.55
CTNND1-213ENST00000526357 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
CTNND1-213ENST00000526357 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
CTNND1-213ENST00000526357 AK7Q96M32 723 aa11.58□□□□□ -0.56
CTNND1-213ENST00000526357 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
CTNND1-213ENST00000526357 GGT6Q6P531 493 aa11.57□□□□□ -0.56
CTNND1-213ENST00000526357 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
CTNND1-213ENST00000526357 ZNF592Q92610 1267 aa11.56□□□□□ -0.56
CTNND1-213ENST00000526357 RUFY1Q96T51 708 aa11.56□□□□□ -0.56
CTNND1-213ENST00000526357 ACBD3Q9H3P7 528 aa11.56□□□□□ -0.56
CTNND1-213ENST00000526357 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
CTNND1-213ENST00000526357 NOM1Q5C9Z4 860 aaKnown RBP11.56□□□□□ -0.56
CTNND1-213ENST00000526357 WRNQ14191 1432 aaPredicted RBP eCLIP11.56□□□□□ -0.56
CTNND1-213ENST00000526357 AMPHP49418 695 aa11.55□□□□□ -0.56
CTNND1-213ENST00000526357 RILPL2Q969X0 211 aa11.55□□□□□ -0.56
CTNND1-213ENST00000526357 MCTP1Q6DN14 999 aa11.55□□□□□ -0.56
CTNND1-213ENST00000526357 PKD2Q13563 968 aa11.55□□□□□ -0.56
CTNND1-213ENST00000526357 NACADO15069 1562 aa11.54□□□□□ -0.56
CTNND1-213ENST00000526357 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
CTNND1-213ENST00000526357 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
CTNND1-213ENST00000526357 RUFY2Q8WXA3 655 aa11.54□□□□□ -0.56
CTNND1-213ENST00000526357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.54□□□□□ -0.561e-6■■■■■ 38.5
CTNND1-213ENST00000526357 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
CTNND1-213ENST00000526357 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
CTNND1-213ENST00000526357 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTNND1-213ENST00000526357 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
CTNND1-213ENST00000526357 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
CTNND1-213ENST00000526357 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
CTNND1-213ENST00000526357 EID1Q9Y6B2 187 aa11.53□□□□□ -0.56
CTNND1-213ENST00000526357 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.56
CTNND1-213ENST00000526357 ARGLU1Q9NWB6 273 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-213ENST00000526357 RAD21O60216 631 aa11.51□□□□□ -0.57
CTNND1-213ENST00000526357 CCDC43Q96MW1 224 aaKnown RBP11.51□□□□□ -0.57
CTNND1-213ENST00000526357 ODF2Q5BJF6 829 aa11.51□□□□□ -0.57
CTNND1-213ENST00000526357 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
CTNND1-213ENST00000526357 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-213ENST00000526357 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
CTNND1-213ENST00000526357 ZKSCAN1P17029 563 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-213ENST00000526357 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
CTNND1-213ENST00000526357 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
CTNND1-213ENST00000526357 CENPQQ7L2Z9 268 aaPredicted RBP11.5□□□□□ -0.57
CTNND1-213ENST00000526357 CPLX1O14810 134 aa11.5□□□□□ -0.57
CTNND1-213ENST00000526357 NAP1L1P55209 391 aaKnown RBP11.5□□□□□ -0.57
CTNND1-213ENST00000526357 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
CTNND1-213ENST00000526357 RDXP35241 583 aaKnown RBP11.49□□□□□ -0.57
CTNND1-213ENST00000526357 ANKRD45Q5TZF3 282 aa11.49□□□□□ -0.57
CTNND1-213ENST00000526357 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
CTNND1-213ENST00000526357 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
CTNND1-213ENST00000526357 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
CTNND1-213ENST00000526357 CCDC191Q8NCU4 936 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 ANO2Q9NQ90 1003 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 ERICH2A1L162 156 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 CCDC173Q0VFZ6 552 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 TRDNQ13061 729 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 GSE1Q14687 1217 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-213ENST00000526357 REC8O95072 547 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 MYO6Q9UM54 1294 aa11.48□□□□□ -0.57
CTNND1-213ENST00000526357 HSP90B2PQ58FF3 399 aa11.47□□□□□ -0.57
CTNND1-213ENST00000526357 BICD2Q8TD16 824 aa11.47□□□□□ -0.57
CTNND1-213ENST00000526357 RNF20Q5VTR2 975 aa11.47□□□□□ -0.57
CTNND1-213ENST00000526357 SASS6Q6UVJ0 657 aa11.47□□□□□ -0.57
CTNND1-213ENST00000526357 MAP7D2Q96T17 732 aa11.47□□□□□ -0.57
CTNND1-213ENST00000526357 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-213ENST00000526357 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
CTNND1-213ENST00000526357 FOXD4L6Q3SYB3 417 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-213ENST00000526357 FOXD4L3Q6VB84 417 aaPredicted RBP11.47□□□□□ -0.57
CTNND1-213ENST00000526357 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms