RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
PFDN1-207ENST00000524074 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
PFDN1-207ENST00000524074 POM121Q96HA1 1249 aa15.08■□□□□ 0
PFDN1-207ENST00000524074 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
PFDN1-207ENST00000524074 FNBP4Q8N3X1 1017 aaPredicted RBP15.07■□□□□ 0
PFDN1-207ENST00000524074 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
PFDN1-207ENST00000524074 TRAIPQ9BWF2 469 aa15.07■□□□□ 0
PFDN1-207ENST00000524074 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
PFDN1-207ENST00000524074 CDHR5Q9HBB8 845 aa15.05■□□□□ -0
PFDN1-207ENST00000524074 PROCA1Q8NCQ7 364 aaPredicted RBP15.04■□□□□ -0
PFDN1-207ENST00000524074 SPDYE5A6NIY4 337 aa15.03■□□□□ -0
PFDN1-207ENST00000524074 EN1Q05925 392 aaPredicted RBP15.03■□□□□ -0
PFDN1-207ENST00000524074 POLR3EQ9NVU0 708 aa15.03■□□□□ -0
PFDN1-207ENST00000524074 MAP3K7O43318 606 aa15.02■□□□□ -0
PFDN1-207ENST00000524074 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
PFDN1-207ENST00000524074 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
PFDN1-207ENST00000524074 IER5LQ5T953 404 aa15.01□□□□□ -0.01
PFDN1-207ENST00000524074 NPDC1Q9NQX5 325 aaPredicted RBP15.01□□□□□ -0.01
PFDN1-207ENST00000524074 PHOX2BQ99453 314 aa15□□□□□ -0.01
PFDN1-207ENST00000524074 EPAS1Q99814 870 aa15□□□□□ -0.01
PFDN1-207ENST00000524074 PLCG2P16885 1265 aa14.99□□□□□ -0.01
PFDN1-207ENST00000524074 ATN1P54259 1190 aaPredicted RBP14.99□□□□□ -0.01
PFDN1-207ENST00000524074 TMEM92Q6UXU6 159 aa14.99□□□□□ -0.01
PFDN1-207ENST00000524074 FAM217BQ9NTX9 383 aaPredicted RBP14.99□□□□□ -0.01
PFDN1-207ENST00000524074 PHF14O94880 888 aa14.97□□□□□ -0.01
PFDN1-207ENST00000524074 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.97□□□□□ -0.01
PFDN1-207ENST00000524074 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
PFDN1-207ENST00000524074 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
PFDN1-207ENST00000524074 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
PFDN1-207ENST00000524074 PLSCR2Q9NRY7 297 aa14.95□□□□□ -0.02
PFDN1-207ENST00000524074 CLK2P49760 499 aaKnown RBP14.94□□□□□ -0.02
PFDN1-207ENST00000524074 BANK1Q8NDB2 785 aa14.94□□□□□ -0.02
PFDN1-207ENST00000524074 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
PFDN1-207ENST00000524074 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
PFDN1-207ENST00000524074 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
PFDN1-207ENST00000524074 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
PFDN1-207ENST00000524074 OATP04181 439 aa14.92□□□□□ -0.02
PFDN1-207ENST00000524074 METTL3Q86U44 580 aaKnown RBP14.91□□□□□ -0.02
PFDN1-207ENST00000524074 RFC5P40937 340 aa14.9□□□□□ -0.02
PFDN1-207ENST00000524074 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
PFDN1-207ENST00000524074 DIXDC1Q155Q3 683 aa14.88□□□□□ -0.03
PFDN1-207ENST00000524074 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
PFDN1-207ENST00000524074 RETREG2Q8NC44 543 aa14.88□□□□□ -0.03
PFDN1-207ENST00000524074 SNRKQ9NRH2 765 aa14.88□□□□□ -0.03
PFDN1-207ENST00000524074 CLCN6P51797 869 aa14.87□□□□□ -0.03
PFDN1-207ENST00000524074 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
PFDN1-207ENST00000524074 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
PFDN1-207ENST00000524074 NLRP7Q8WX94 980 aa14.87□□□□□ -0.03
PFDN1-207ENST00000524074 FAM161AQ3B820 660 aa14.86□□□□□ -0.03
PFDN1-207ENST00000524074 TMEM259Q4ZIN3 620 aa14.86□□□□□ -0.03
PFDN1-207ENST00000524074 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
PFDN1-207ENST00000524074 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
PFDN1-207ENST00000524074 PCDHGA10Q9Y5H3 936 aa14.85□□□□□ -0.03
PFDN1-207ENST00000524074 ASTLQ6HA08 431 aaPredicted RBP14.84□□□□□ -0.03
PFDN1-207ENST00000524074 PXYLP1Q8TE99 480 aa14.83□□□□□ -0.04
PFDN1-207ENST00000524074 SLC34A2O95436 690 aa14.82□□□□□ -0.04
PFDN1-207ENST00000524074 CERKQ8TCT0 537 aa14.81□□□□□ -0.04
PFDN1-207ENST00000524074 FBXW7Q969H0 707 aa14.81□□□□□ -0.04
PFDN1-207ENST00000524074 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
PFDN1-207ENST00000524074 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
PFDN1-207ENST00000524074 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
PFDN1-207ENST00000524074 TMCO4Q5TGY1 634 aa14.79□□□□□ -0.04
PFDN1-207ENST00000524074 GDPD2Q9HCC8 539 aa14.78□□□□□ -0.04
PFDN1-207ENST00000524074 PRM3Q9NNZ6 103 aa14.78□□□□□ -0.04
PFDN1-207ENST00000524074 SEC24BO95487 1268 aa14.77□□□□□ -0.05
PFDN1-207ENST00000524074 PPP2R2DQ66LE6 453 aa14.77□□□□□ -0.05
PFDN1-207ENST00000524074 CALR3Q96L12 384 aaKnown RBP14.77□□□□□ -0.05
PFDN1-207ENST00000524074 PDE4CQ08493 712 aa14.76□□□□□ -0.05
PFDN1-207ENST00000524074 LIMD1Q9UGP4 676 aa14.76□□□□□ -0.05
PFDN1-207ENST00000524074 ACIN1Q9UKV3 1341 aaKnown RBP14.75□□□□□ -0.05
PFDN1-207ENST00000524074 MTMR14Q8NCE2 650 aa14.75□□□□□ -0.05
PFDN1-207ENST00000524074 RIC3Q7Z5B4 369 aa14.74□□□□□ -0.05
PFDN1-207ENST00000524074 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
PFDN1-207ENST00000524074 IRF5Q13568 498 aa14.73□□□□□ -0.05
PFDN1-207ENST00000524074 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
PFDN1-207ENST00000524074 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
PFDN1-207ENST00000524074 ABL2P42684 1182 aa14.72□□□□□ -0.05
PFDN1-207ENST00000524074 FBXO31Q5XUX0 539 aaPredicted RBP14.72□□□□□ -0.05
PFDN1-207ENST00000524074 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
PFDN1-207ENST00000524074 RBM46Q8TBY0 533 aaKnown RBP14.71□□□□□ -0.05
PFDN1-207ENST00000524074 TUSC1Q2TAM9 212 aa14.69□□□□□ -0.06
PFDN1-207ENST00000524074 C6orf132Q5T0Z8 1188 aa14.69□□□□□ -0.06
PFDN1-207ENST00000524074 SPIRE2Q8WWL2 714 aa14.69□□□□□ -0.06
PFDN1-207ENST00000524074 GLMNQ92990 594 aa14.69□□□□□ -0.06
PFDN1-207ENST00000524074 SOCS7O14512 581 aa14.68□□□□□ -0.06
PFDN1-207ENST00000524074 TTC13Q8NBP0 860 aa14.68□□□□□ -0.06
PFDN1-207ENST00000524074 MFAP1P55081 439 aaKnown RBP14.67□□□□□ -0.06
PFDN1-207ENST00000524074 RGS22Q8NE09 1264 aa14.67□□□□□ -0.06
PFDN1-207ENST00000524074 PCDHGA4Q9Y5G9 962 aa14.67□□□□□ -0.06
PFDN1-207ENST00000524074 COLQQ9Y215 455 aaPredicted RBP14.66□□□□□ -0.06
PFDN1-207ENST00000524074 PATL2C9JE40 543 aaKnown RBP14.65□□□□□ -0.06
PFDN1-207ENST00000524074 SPTLC1O15269 473 aa14.65□□□□□ -0.06
PFDN1-207ENST00000524074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
PFDN1-207ENST00000524074 POM121CA8CG34 1229 aa14.64□□□□□ -0.07
PFDN1-207ENST00000524074 CSPP1Q1MSJ5 1256 aa14.64□□□□□ -0.07
PFDN1-207ENST00000524074 NUTM1Q86Y26 1132 aa14.64□□□□□ -0.07
PFDN1-207ENST00000524074 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
PFDN1-207ENST00000524074 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
PFDN1-207ENST00000524074 FOSBP53539 338 aa14.63□□□□□ -0.07
PFDN1-207ENST00000524074 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms