RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 TSHZ1Q6ZSZ6 1077 aa8.46□□□□□ -1.06
NPM1-211ENST00000523622 MRRFQ96E11 262 aaKnown RBP8.46□□□□□ -1.06
NPM1-211ENST00000523622 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
NPM1-211ENST00000523622 MTA3Q9BTC8 594 aa8.46□□□□□ -1.06
NPM1-211ENST00000523622 CIZ1Q9ULV3 898 aaPredicted RBP8.46□□□□□ -1.06
NPM1-211ENST00000523622 PLEKHG3A1L390 1219 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 CLGNO14967 610 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
NPM1-211ENST00000523622 MAP4K4O95819 1239 aaPredicted RBP8.45□□□□□ -1.06
NPM1-211ENST00000523622 TCF3P15923 654 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 FOSBP53539 338 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 POLA2Q14181 598 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 MYBPC2Q14324 1141 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
NPM1-211ENST00000523622 TRIM66O15016 1216 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 PPFIA4O75335 1185 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 PEX14O75381 377 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 LONRF3Q496Y0 759 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 RTL5Q5HYW3 569 aaPredicted RBP8.44□□□□□ -1.06
NPM1-211ENST00000523622 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 UBXN4Q92575 508 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 ZNF622Q969S3 477 aaKnown RBP eCLIP8.44□□□□□ -1.061e-52■□□□□ 9.5
NPM1-211ENST00000523622 RPS6KL1Q9Y6S9 549 aa8.44□□□□□ -1.06
NPM1-211ENST00000523622 KRBA2Q6ZNG9 492 aa8.43□□□□□ -1.06
NPM1-211ENST00000523622 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
NPM1-211ENST00000523622 IVNS1ABPQ9Y6Y0 642 aa8.43□□□□□ -1.06
NPM1-211ENST00000523622 ACIN1Q9UKV3 1341 aaKnown RBP8.43□□□□□ -1.06
NPM1-211ENST00000523622 MCM6Q14566 821 aa8.42□□□□□ -1.06
NPM1-211ENST00000523622 SMC5Q8IY18 1101 aa8.42□□□□□ -1.06
NPM1-211ENST00000523622 ARHGEF1Q92888 912 aaKnown RBP8.42□□□□□ -1.06
NPM1-211ENST00000523622 RNF25Q96BH1 459 aaPredicted RBP8.41□□□□□ -1.06
NPM1-211ENST00000523622 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
NPM1-211ENST00000523622 CCDC181Q5TID7 509 aa8.4□□□□□ -1.06
NPM1-211ENST00000523622 KRI1Q8N9T8 703 aaKnown RBP8.4□□□□□ -1.06
NPM1-211ENST00000523622 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
NPM1-211ENST00000523622 YTHDC1Q96MU7 727 aaKnown RBP8.4□□□□□ -1.06
NPM1-211ENST00000523622 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.06
NPM1-211ENST00000523622 CCER2I3L3R5 266 aa8.39□□□□□ -1.07
NPM1-211ENST00000523622 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
NPM1-211ENST00000523622 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
NPM1-211ENST00000523622 CREB3O43889 395 aa8.38□□□□□ -1.07
NPM1-211ENST00000523622 GTF2E1P29083 439 aaPredicted RBP8.38□□□□□ -1.07
NPM1-211ENST00000523622 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
NPM1-211ENST00000523622 SDR16C5Q8N3Y7 309 aa8.38□□□□□ -1.07
NPM1-211ENST00000523622 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
NPM1-211ENST00000523622 TTC36A6NLP5 189 aa8.37□□□□□ -1.07
NPM1-211ENST00000523622 TXNDC2Q86VQ3 553 aa8.37□□□□□ -1.07
NPM1-211ENST00000523622 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
NPM1-211ENST00000523622 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
NPM1-211ENST00000523622 VGFO15240 615 aaPredicted RBP8.36□□□□□ -1.07
NPM1-211ENST00000523622 SH3BP5O60239 455 aa8.36□□□□□ -1.07
NPM1-211ENST00000523622 CLEC4GQ6UXB4 293 aa8.36□□□□□ -1.07
NPM1-211ENST00000523622 VTI1AQ96AJ9 217 aa8.36□□□□□ -1.07
NPM1-211ENST00000523622 METTL14Q9HCE5 456 aaKnown RBP8.36□□□□□ -1.07
NPM1-211ENST00000523622 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
NPM1-211ENST00000523622 WDR78Q5VTH9 848 aa8.35□□□□□ -1.07
NPM1-211ENST00000523622 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
NPM1-211ENST00000523622 DDRGK1Q96HY6 314 aa8.35□□□□□ -1.07
NPM1-211ENST00000523622 GPATCH3Q96I76 525 aa8.35□□□□□ -1.07
NPM1-211ENST00000523622 EXOC5O00471 708 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 PARNO95453 639 aaKnown RBP8.34□□□□□ -1.07
NPM1-211ENST00000523622 PAX3P23760 479 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
NPM1-211ENST00000523622 CDCA8Q53HL2 280 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 MAMSTRQ6ZN01 415 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 PMM1Q92871 262 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 MAF1Q9H063 256 aa8.34□□□□□ -1.07
NPM1-211ENST00000523622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.075e-11■■■■■ 93.2
NPM1-211ENST00000523622 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
NPM1-211ENST00000523622 MMP14P50281 582 aa8.33□□□□□ -1.08
NPM1-211ENST00000523622 APLP1P51693 650 aa8.33□□□□□ -1.08
NPM1-211ENST00000523622 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
NPM1-211ENST00000523622 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
NPM1-211ENST00000523622 CASC1Q6TDU7 716 aa8.33□□□□□ -1.08
NPM1-211ENST00000523622 STK24Q9Y6E0 443 aa8.33□□□□□ -1.08
NPM1-211ENST00000523622 CCDC194A0A1B0GVG4 234 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 ANP32CO43423 234 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 LIG1P18858 919 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 ZC3H6P61129 1189 aaKnown RBP8.32□□□□□ -1.08
NPM1-211ENST00000523622 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 AXDND1Q5T1B0 1012 aaPredicted RBP8.32□□□□□ -1.08
NPM1-211ENST00000523622 DPH6Q7L8W6 267 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 SBNO2Q9Y2G9 1366 aa8.32□□□□□ -1.08
NPM1-211ENST00000523622 MKRN4PQ13434 485 aaPredicted RBP8.31□□□□□ -1.08
NPM1-211ENST00000523622 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
NPM1-211ENST00000523622 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
NPM1-211ENST00000523622 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
NPM1-211ENST00000523622 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
NPM1-211ENST00000523622 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.31□□□□□ -1.08
NPM1-211ENST00000523622 USTQ9Y2C2 406 aa8.31□□□□□ -1.08
NPM1-211ENST00000523622 KIF4AO95239 1232 aa8.3□□□□□ -1.08
NPM1-211ENST00000523622 SF3A1Q15459 793 aaKnown RBP8.3□□□□□ -1.08
NPM1-211ENST00000523622 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
NPM1-211ENST00000523622 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
NPM1-211ENST00000523622 NRDCO43847 1150 aa8.29□□□□□ -1.08
NPM1-211ENST00000523622 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
NPM1-211ENST00000523622 SSFA2P28290 1259 aa8.29□□□□□ -1.08
NPM1-211ENST00000523622 NAALADL2Q58DX5 795 aa8.29□□□□□ -1.08
NPM1-211ENST00000523622 STAC3Q96MF2 364 aa8.29□□□□□ -1.08
NPM1-211ENST00000523622 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms