RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 IRF6O14896 467 aa10.06□□□□□ -0.8
CTNNA1-238ENST00000523298 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-238ENST00000523298 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
CTNNA1-238ENST00000523298 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
CTNNA1-238ENST00000523298 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
CTNNA1-238ENST00000523298 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
CTNNA1-238ENST00000523298 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
CTNNA1-238ENST00000523298 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-238ENST00000523298 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CTNNA1-238ENST00000523298 COL9A1P20849 921 aa10.03□□□□□ -0.8
CTNNA1-238ENST00000523298 PDE4DQ08499 809 aa10.03□□□□□ -0.8
CTNNA1-238ENST00000523298 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
CTNNA1-238ENST00000523298 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
CTNNA1-238ENST00000523298 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
CTNNA1-238ENST00000523298 C3orf80F5H4A9 247 aa10□□□□□ -0.81
CTNNA1-238ENST00000523298 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
CTNNA1-238ENST00000523298 SNPHO15079 494 aa9.99□□□□□ -0.81
CTNNA1-238ENST00000523298 PADI6Q6TGC4 694 aa9.99□□□□□ -0.81
CTNNA1-238ENST00000523298 ST18O60284 1047 aa9.98□□□□□ -0.81
CTNNA1-238ENST00000523298 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
CTNNA1-238ENST00000523298 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
CTNNA1-238ENST00000523298 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
CTNNA1-238ENST00000523298 KDM4CQ9H3R0 1056 aa9.98□□□□□ -0.81
CTNNA1-238ENST00000523298 AMHR2Q16671 573 aa9.97□□□□□ -0.81
CTNNA1-238ENST00000523298 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
CTNNA1-238ENST00000523298 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
CTNNA1-238ENST00000523298 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-238ENST00000523298 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
CTNNA1-238ENST00000523298 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
CTNNA1-238ENST00000523298 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
CTNNA1-238ENST00000523298 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
CTNNA1-238ENST00000523298 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
CTNNA1-238ENST00000523298 TSKSQ9UJT2 592 aa9.93□□□□□ -0.82
CTNNA1-238ENST00000523298 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
CTNNA1-238ENST00000523298 PRSS12P56730 875 aa9.92□□□□□ -0.82
CTNNA1-238ENST00000523298 CDCA7LQ96GN5 454 aa9.92□□□□□ -0.82
CTNNA1-238ENST00000523298 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
CTNNA1-238ENST00000523298 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
CTNNA1-238ENST00000523298 PSEN2P49810 448 aa9.9□□□□□ -0.82
CTNNA1-238ENST00000523298 PROX2Q3B8N5 592 aa9.9□□□□□ -0.82
CTNNA1-238ENST00000523298 METTL3Q86U44 580 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-238ENST00000523298 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
CTNNA1-238ENST00000523298 PLEKHG3A1L390 1219 aa9.89□□□□□ -0.83
CTNNA1-238ENST00000523298 MS4A1P11836 297 aa9.89□□□□□ -0.83
CTNNA1-238ENST00000523298 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-238ENST00000523298 CERKQ8TCT0 537 aa9.89□□□□□ -0.83
CTNNA1-238ENST00000523298 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
CTNNA1-238ENST00000523298 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-238ENST00000523298 PPP1R3GB7ZBB8 358 aa9.88□□□□□ -0.83
CTNNA1-238ENST00000523298 KCNK17Q96T54 332 aa9.88□□□□□ -0.83
CTNNA1-238ENST00000523298 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-238ENST00000523298 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
CTNNA1-238ENST00000523298 PTPREP23469 700 aa9.87□□□□□ -0.83
CTNNA1-238ENST00000523298 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-238ENST00000523298 GIGYF2Q6Y7W6 1299 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-238ENST00000523298 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
CTNNA1-238ENST00000523298 FAM163AQ96GL9 167 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-238ENST00000523298 ERBB3P21860 1342 aa9.85□□□□□ -0.83
CTNNA1-238ENST00000523298 TTLL12Q14166 644 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-238ENST00000523298 EYA1Q99502 592 aa9.85□□□□□ -0.83
CTNNA1-238ENST00000523298 EMP3P54852 163 aa9.84□□□□□ -0.83
CTNNA1-238ENST00000523298 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
CTNNA1-238ENST00000523298 FAM205CA6NFA0 338 aa9.83□□□□□ -0.84
CTNNA1-238ENST00000523298 TRIM6-TRIM34B2RNG4 842 aa9.83□□□□□ -0.84
CTNNA1-238ENST00000523298 SMAPO00193 183 aa9.83□□□□□ -0.84
CTNNA1-238ENST00000523298 NUDT18Q6ZVK8 323 aa9.82□□□□□ -0.84
CTNNA1-238ENST00000523298 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
CTNNA1-238ENST00000523298 OATP04181 439 aa9.8□□□□□ -0.84
CTNNA1-238ENST00000523298 TATDN2Q93075 761 aa9.8□□□□□ -0.84
CTNNA1-238ENST00000523298 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
CTNNA1-238ENST00000523298 RCCD1A6NED2 376 aa9.79□□□□□ -0.84
CTNNA1-238ENST00000523298 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
CTNNA1-238ENST00000523298 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-238ENST00000523298 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 SSTR3P32745 418 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 CLCN1P35523 988 aa9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 KIAA1468Q9P260 1216 aa9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 PNMA3Q9UL41 463 aa9.78□□□□□ -0.84
CTNNA1-238ENST00000523298 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-238ENST00000523298 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
CTNNA1-238ENST00000523298 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-238ENST00000523298 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
CTNNA1-238ENST00000523298 DDRGK1Q96HY6 314 aa9.73□□□□□ -0.85
CTNNA1-238ENST00000523298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 ONECUT3O60422 494 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 PACS2Q86VP3 889 aa9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
CTNNA1-238ENST00000523298 DNAJB2P25686 324 aa9.7□□□□□ -0.86
CTNNA1-238ENST00000523298 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-238ENST00000523298 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
CTNNA1-238ENST00000523298 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-238ENST00000523298 PBX2P40425 430 aa9.69□□□□□ -0.86
CTNNA1-238ENST00000523298 CD46P15529 392 aa9.68□□□□□ -0.86
CTNNA1-238ENST00000523298 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-238ENST00000523298 POTEMA6NI47 508 aa9.67□□□□□ -0.86
CTNNA1-238ENST00000523298 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms