RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 FECHP22830 423 aa12.5□□□□□ -0.41
PVT1-214ENST00000522875 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
PVT1-214ENST00000522875 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
PVT1-214ENST00000522875 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
PVT1-214ENST00000522875 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
PVT1-214ENST00000522875 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
PVT1-214ENST00000522875 NPDC1Q9NQX5 325 aaPredicted RBP12.49□□□□□ -0.41
PVT1-214ENST00000522875 GNPATO15228 680 aa12.47□□□□□ -0.41
PVT1-214ENST00000522875 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
PVT1-214ENST00000522875 HIC1Q14526 733 aa12.46□□□□□ -0.41
PVT1-214ENST00000522875 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
PVT1-214ENST00000522875 ST18O60284 1047 aa12.44□□□□□ -0.42
PVT1-214ENST00000522875 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
PVT1-214ENST00000522875 AK7Q96M32 723 aa12.43□□□□□ -0.42
PVT1-214ENST00000522875 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
PVT1-214ENST00000522875 MAP2K5Q13163 448 aa12.41□□□□□ -0.42
PVT1-214ENST00000522875 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
PVT1-214ENST00000522875 IRF6O14896 467 aa12.39□□□□□ -0.43
PVT1-214ENST00000522875 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
PVT1-214ENST00000522875 UNC13AQ9UPW8 1703 aa12.38□□□□□ -0.43
PVT1-214ENST00000522875 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
PVT1-214ENST00000522875 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PVT1-214ENST00000522875 TRIM66O15016 1216 aa12.37□□□□□ -0.43
PVT1-214ENST00000522875 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
PVT1-214ENST00000522875 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
PVT1-214ENST00000522875 COL9A1P20849 921 aa12.36□□□□□ -0.43
PVT1-214ENST00000522875 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
PVT1-214ENST00000522875 ERBB3P21860 1342 aa12.35□□□□□ -0.43
PVT1-214ENST00000522875 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
PVT1-214ENST00000522875 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
PVT1-214ENST00000522875 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
PVT1-214ENST00000522875 PTPREP23469 700 aa12.33□□□□□ -0.44
PVT1-214ENST00000522875 EMP3P54852 163 aa12.33□□□□□ -0.44
PVT1-214ENST00000522875 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
PVT1-214ENST00000522875 PDE4DQ08499 809 aa12.31□□□□□ -0.44
PVT1-214ENST00000522875 PRSS12P56730 875 aa12.3□□□□□ -0.44
PVT1-214ENST00000522875 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
PVT1-214ENST00000522875 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
PVT1-214ENST00000522875 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
PVT1-214ENST00000522875 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
PVT1-214ENST00000522875 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
PVT1-214ENST00000522875 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
PVT1-214ENST00000522875 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
PVT1-214ENST00000522875 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
PVT1-214ENST00000522875 PSEN2P49810 448 aa12.27□□□□□ -0.45
PVT1-214ENST00000522875 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
PVT1-214ENST00000522875 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
PVT1-214ENST00000522875 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
PVT1-214ENST00000522875 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
PVT1-214ENST00000522875 POTEBQ6S5H4 581 aa12.25□□□□□ -0.45
PVT1-214ENST00000522875 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
PVT1-214ENST00000522875 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
PVT1-214ENST00000522875 AMHR2Q16671 573 aa12.24□□□□□ -0.45
PVT1-214ENST00000522875 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
PVT1-214ENST00000522875 ADGRG1Q9Y653 693 aa12.24□□□□□ -0.45
PVT1-214ENST00000522875 PROX2Q3B8N5 592 aa12.23□□□□□ -0.45
PVT1-214ENST00000522875 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
PVT1-214ENST00000522875 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
PVT1-214ENST00000522875 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
PVT1-214ENST00000522875 KDM4CQ9H3R0 1056 aa12.22□□□□□ -0.45
PVT1-214ENST00000522875 ARHGAP33O14559 1287 aa12.21□□□□□ -0.45
PVT1-214ENST00000522875 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
PVT1-214ENST00000522875 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
PVT1-214ENST00000522875 NLRP7Q8WX94 980 aa12.21□□□□□ -0.45
PVT1-214ENST00000522875 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
PVT1-214ENST00000522875 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
PVT1-214ENST00000522875 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
PVT1-214ENST00000522875 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
PVT1-214ENST00000522875 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
PVT1-214ENST00000522875 OATP04181 439 aa12.19□□□□□ -0.46
PVT1-214ENST00000522875 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
PVT1-214ENST00000522875 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
PVT1-214ENST00000522875 NUDT18Q6ZVK8 323 aa12.17□□□□□ -0.46
PVT1-214ENST00000522875 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
PVT1-214ENST00000522875 TMEM132AQ24JP5 1023 aa12.16□□□□□ -0.46
PVT1-214ENST00000522875 SMAPO00193 183 aa12.15□□□□□ -0.46
PVT1-214ENST00000522875 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
PVT1-214ENST00000522875 TATDN2Q93075 761 aa12.15□□□□□ -0.46
PVT1-214ENST00000522875 EYA1Q99502 592 aa12.15□□□□□ -0.46
PVT1-214ENST00000522875 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
PVT1-214ENST00000522875 PBX2P40425 430 aa12.14□□□□□ -0.47
PVT1-214ENST00000522875 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
PVT1-214ENST00000522875 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
PVT1-214ENST00000522875 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
PVT1-214ENST00000522875 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
PVT1-214ENST00000522875 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
PVT1-214ENST00000522875 FAM117AQ9C073 453 aa12.13□□□□□ -0.47
PVT1-214ENST00000522875 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
PVT1-214ENST00000522875 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
PVT1-214ENST00000522875 CLCN1P35523 988 aa12.11□□□□□ -0.47
PVT1-214ENST00000522875 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
PVT1-214ENST00000522875 RCCD1A6NED2 376 aa12.1□□□□□ -0.47
PVT1-214ENST00000522875 MS4A1P11836 297 aa12.1□□□□□ -0.47
PVT1-214ENST00000522875 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
PVT1-214ENST00000522875 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
PVT1-214ENST00000522875 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
PVT1-214ENST00000522875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
PVT1-214ENST00000522875 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
PVT1-214ENST00000522875 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
PVT1-214ENST00000522875 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms