RNA–Protein interactions for RNA: ENST00000522020.1

MCPH1-206, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-206ENST00000522020 GSK3AP49840 483 aa5.74□□□□□ -1.49
MCPH1-206ENST00000522020 FBXO22Q8NEZ5 403 aa5.74□□□□□ -1.49
MCPH1-206ENST00000522020 BCL2L12Q9HB09 334 aa5.74□□□□□ -1.49
MCPH1-206ENST00000522020 TERTO14746 1132 aaKnown RBP5.73□□□□□ -1.49
MCPH1-206ENST00000522020 TJAP1Q5JTD0 557 aa5.73□□□□□ -1.49
MCPH1-206ENST00000522020 IFNLR1Q8IU57 520 aaPredicted RBP5.73□□□□□ -1.49
MCPH1-206ENST00000522020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.72□□□□□ -1.49
MCPH1-206ENST00000522020 NLRP6P59044 892 aa5.72□□□□□ -1.49
MCPH1-206ENST00000522020 PTCD2Q8WV60 388 aaKnown RBP5.72□□□□□ -1.49
MCPH1-206ENST00000522020 ZFP91Q96JP5 570 aaPredicted RBP5.72□□□□□ -1.49
MCPH1-206ENST00000522020 TRIM41Q8WV44 630 aa5.71□□□□□ -1.5
MCPH1-206ENST00000522020 PTPREP23469 700 aa5.7□□□□□ -1.5
MCPH1-206ENST00000522020 ZNF454Q8N9F8 522 aa5.7□□□□□ -1.5
MCPH1-206ENST00000522020 RNF25Q96BH1 459 aaPredicted RBP5.69□□□□□ -1.5
MCPH1-206ENST00000522020 RIOK3O14730 519 aaKnown RBP5.68□□□□□ -1.5
MCPH1-206ENST00000522020 ZFRQ96KR1 1074 aaKnown RBP5.68□□□□□ -1.5
MCPH1-206ENST00000522020 GMPRP36959 345 aa5.67□□□□□ -1.5
MCPH1-206ENST00000522020 EMID1Q96A84 441 aaPredicted RBP5.67□□□□□ -1.5
MCPH1-206ENST00000522020 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
MCPH1-206ENST00000522020 TNFRSF10AO00220 468 aa5.66□□□□□ -1.5
MCPH1-206ENST00000522020 VGFO15240 615 aaPredicted RBP5.66□□□□□ -1.5
MCPH1-206ENST00000522020 KCNMA1Q12791 1236 aa5.66□□□□□ -1.5
MCPH1-206ENST00000522020 ZNF516Q92618 1163 aa5.66□□□□□ -1.5
MCPH1-206ENST00000522020 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
MCPH1-206ENST00000522020 HPS5Q9UPZ3 1129 aa5.66□□□□□ -1.5
MCPH1-206ENST00000522020 PROX2Q3B8N5 592 aa5.65□□□□□ -1.5
MCPH1-206ENST00000522020 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.5
MCPH1-206ENST00000522020 TMC2Q8TDI7 906 aa5.65□□□□□ -1.5
MCPH1-206ENST00000522020 PRR20EP86478 221 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 PRR20CP86479 221 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 PRR20DP86480 221 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 PRR20BP86481 221 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 PRR20AP86496 221 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 RABGEF1Q9UJ41 708 aa5.64□□□□□ -1.51
MCPH1-206ENST00000522020 TSR3Q9UJK0 312 aaKnown RBP5.64□□□□□ -1.51
MCPH1-206ENST00000522020 MTRQ99707 1265 aa5.63□□□□□ -1.51
MCPH1-206ENST00000522020 BTBD11A6QL63 1104 aa5.62□□□□□ -1.51
MCPH1-206ENST00000522020 SNRPBP14678 240 aaKnown RBP5.61□□□□□ -1.51
MCPH1-206ENST00000522020 SLC19A1P41440 591 aa5.61□□□□□ -1.51
MCPH1-206ENST00000522020 TMEM151AQ8N4L1 468 aa5.61□□□□□ -1.51
MCPH1-206ENST00000522020 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
MCPH1-206ENST00000522020 GDF9O60383 454 aa5.59□□□□□ -1.51
MCPH1-206ENST00000522020 GDF11O95390 407 aa5.59□□□□□ -1.51
MCPH1-206ENST00000522020 BCL11BQ9C0K0 894 aaPredicted RBP5.59□□□□□ -1.51
MCPH1-206ENST00000522020 IL21Q9HBE4 155 aa5.59□□□□□ -1.51
MCPH1-206ENST00000522020 SPRYD7Q5W111 196 aa5.58□□□□□ -1.52
MCPH1-206ENST00000522020 LAPTM4BQ86VI4 370 aa5.58□□□□□ -1.52
MCPH1-206ENST00000522020 ADAM33Q9BZ11 813 aa5.58□□□□□ -1.52
MCPH1-206ENST00000522020 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
MCPH1-206ENST00000522020 FOSBP53539 338 aa5.57□□□□□ -1.52
MCPH1-206ENST00000522020 ZNF598Q86UK7 904 aaKnown RBP5.57□□□□□ -1.52
MCPH1-206ENST00000522020 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.57□□□□□ -1.52
MCPH1-206ENST00000522020 FOXK1P85037 733 aa5.56□□□□□ -1.52
MCPH1-206ENST00000522020 PLPP6Q8IY26 295 aa5.56□□□□□ -1.52
MCPH1-206ENST00000522020 CRIPAKQ8N1N5 446 aa5.56□□□□□ -1.52
MCPH1-206ENST00000522020 RASSF7Q02833 373 aa5.55□□□□□ -1.52
MCPH1-206ENST00000522020 GPAT2Q6NUI2 795 aa5.55□□□□□ -1.52
MCPH1-206ENST00000522020 STK24Q9Y6E0 443 aa5.55□□□□□ -1.52
MCPH1-206ENST00000522020 AXIN1O15169 862 aa5.54□□□□□ -1.52
MCPH1-206ENST00000522020 TBC1D12O60347 775 aa5.54□□□□□ -1.52
MCPH1-206ENST00000522020 ZNF697Q5TEC3 545 aa5.54□□□□□ -1.52
MCPH1-206ENST00000522020 KIAA1468Q9P260 1216 aa5.54□□□□□ -1.52
MCPH1-206ENST00000522020 LRCH3Q96II8 777 aa5.53□□□□□ -1.52
MCPH1-206ENST00000522020 KRTAP17-1Q9BYP8 105 aa5.53□□□□□ -1.52
MCPH1-206ENST00000522020 PPP1R37O75864 691 aa5.52□□□□□ -1.53
MCPH1-206ENST00000522020 COL9A1P20849 921 aa5.52□□□□□ -1.53
MCPH1-206ENST00000522020 GGCXP38435 758 aa5.51□□□□□ -1.53
MCPH1-206ENST00000522020 PPP4CP60510 307 aa5.5□□□□□ -1.53
MCPH1-206ENST00000522020 DSG2Q14126 1118 aa5.5□□□□□ -1.53
MCPH1-206ENST00000522020 SLC16A10Q8TF71 515 aa5.5□□□□□ -1.53
MCPH1-206ENST00000522020 LIAT1Q6ZQX7 453 aa5.49□□□□□ -1.53
MCPH1-206ENST00000522020 Q8N3U1 123 aa5.49□□□□□ -1.53
MCPH1-206ENST00000522020 OXER1Q8TDS5 423 aa5.49□□□□□ -1.53
MCPH1-206ENST00000522020 GPHNQ9NQX3 736 aaPredicted RBP5.49□□□□□ -1.53
MCPH1-206ENST00000522020 PPP1R3GB7ZBB8 358 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 STK25O00506 426 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 ADAM23O75077 832 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 AVPP01185 164 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 VEGFBP49765 207 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 TMUB1Q9BVT8 246 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 TAOK2Q9UL54 1235 aa5.48□□□□□ -1.53
MCPH1-206ENST00000522020 RNF223E7ERA6 249 aa5.47□□□□□ -1.53
MCPH1-206ENST00000522020 ZDHHC16Q969W1 377 aa5.47□□□□□ -1.53
MCPH1-206ENST00000522020 ERBB4Q15303 1308 aa5.47□□□□□ -1.53
MCPH1-206ENST00000522020 ECM2O94769 699 aaPredicted RBP5.45□□□□□ -1.54
MCPH1-206ENST00000522020 PKD2Q13563 968 aa5.45□□□□□ -1.54
MCPH1-206ENST00000522020 IRF7Q92985 503 aa5.45□□□□□ -1.54
MCPH1-206ENST00000522020 TRIM47Q96LD4 638 aa5.45□□□□□ -1.54
MCPH1-206ENST00000522020 FAM98CQ17RN3 349 aaKnown RBP5.44□□□□□ -1.54
MCPH1-206ENST00000522020 UPF1Q92900 1129 aaKnown RBP eCLIP5.44□□□□□ -1.54
MCPH1-206ENST00000522020 JPH4Q96JJ6 628 aa5.44□□□□□ -1.54
MCPH1-206ENST00000522020 ATP13A2Q9NQ11 1180 aa5.44□□□□□ -1.54
MCPH1-206ENST00000522020 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
MCPH1-206ENST00000522020 PPEF1O14829 653 aaPredicted RBP5.42□□□□□ -1.54
MCPH1-206ENST00000522020 FOXC1Q12948 553 aa5.42□□□□□ -1.54
MCPH1-206ENST00000522020 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
MCPH1-206ENST00000522020 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
MCPH1-206ENST00000522020 PKD2L1Q9P0L9 805 aa5.42□□□□□ -1.54
MCPH1-206ENST00000522020 NXF1Q9UBU9 619 aaKnown RBP5.42□□□□□ -1.54
MCPH1-206ENST00000522020 IGHA1P01876 353 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms