RNA–Protein interactions for RNA: ENST00000521922.5

UBR5-212, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBR5, Length 9,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-212ENST00000521922 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
UBR5-212ENST00000521922 EPS15P42566 896 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 TIMELESSQ9UNS1 1208 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 RWDD1Q9H446 243 aaPredicted RBP17.99■□□□□ 0.47
UBR5-212ENST00000521922 ITPRIPQ8IWB1 547 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 CTDP1Q9Y5B0 961 aaPredicted RBP17.99■□□□□ 0.47
UBR5-212ENST00000521922 CCDC43Q96MW1 224 aaKnown RBP17.99■□□□□ 0.47
UBR5-212ENST00000521922 CCDC66A2RUB6 948 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
UBR5-212ENST00000521922 CLASRPQ8N2M8 674 aaKnown RBP17.98■□□□□ 0.47
UBR5-212ENST00000521922 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
UBR5-212ENST00000521922 TSPYL1Q9H0U9 437 aa17.97■□□□□ 0.47
UBR5-212ENST00000521922 SEPT11Q9NVA2 429 aaKnown RBP17.97■□□□□ 0.47
UBR5-212ENST00000521922 R3HCC1Q9Y3T6 440 aaKnown RBP17.97■□□□□ 0.47
UBR5-212ENST00000521922 SEPT7Q16181 437 aaKnown RBP17.97■□□□□ 0.47
UBR5-212ENST00000521922 MCTP1Q6DN14 999 aa17.96■□□□□ 0.47
UBR5-212ENST00000521922 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
UBR5-212ENST00000521922 GOLGA6L7A0A1B0GV03 622 aa17.95■□□□□ 0.46
UBR5-212ENST00000521922 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
UBR5-212ENST00000521922 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
UBR5-212ENST00000521922 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
UBR5-212ENST00000521922 CAGE1Q8TC20 777 aa17.94■□□□□ 0.46
UBR5-212ENST00000521922 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
UBR5-212ENST00000521922 LEKR1Q6ZMV7 388 aa17.94■□□□□ 0.46
UBR5-212ENST00000521922 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
UBR5-212ENST00000521922 FOXD4L6Q3SYB3 417 aaPredicted RBP17.93■□□□□ 0.46
UBR5-212ENST00000521922 FOXD4L3Q6VB84 417 aaPredicted RBP17.93■□□□□ 0.46
UBR5-212ENST00000521922 SYNE3Q6ZMZ3 975 aa17.93■□□□□ 0.46
UBR5-212ENST00000521922 ERCC4Q92889 916 aaPredicted RBP17.93■□□□□ 0.46
UBR5-212ENST00000521922 SKOR2Q2VWA4 1001 aaPredicted RBP17.93■□□□□ 0.46
UBR5-212ENST00000521922 BCCIPQ9P287 314 aaKnown RBP eCLIP17.93■□□□□ 0.46
UBR5-212ENST00000521922 TRIM29Q14134 588 aa17.93■□□□□ 0.46
UBR5-212ENST00000521922 SKIDA1Q1XH10 827 aa17.93■□□□□ 0.46
UBR5-212ENST00000521922 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
UBR5-212ENST00000521922 ANKRD62A6NC57 917 aa17.91■□□□□ 0.46
UBR5-212ENST00000521922 RAD21O60216 631 aa17.91■□□□□ 0.46
UBR5-212ENST00000521922 SPAG9O60271 1321 aaKnown RBP17.91■□□□□ 0.46
UBR5-212ENST00000521922 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.91■□□□□ 0.46
UBR5-212ENST00000521922 AMOTL1Q8IY63 956 aa17.91■□□□□ 0.46
UBR5-212ENST00000521922 NF2P35240 595 aa17.9■□□□□ 0.46
UBR5-212ENST00000521922 EEA1Q15075 1411 aa17.89■□□□□ 0.46
UBR5-212ENST00000521922 ENOX2Q16206 610 aaKnown RBP17.89■□□□□ 0.46
UBR5-212ENST00000521922 OFD1O75665 1012 aa17.89■□□□□ 0.45
UBR5-212ENST00000521922 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.45
UBR5-212ENST00000521922 CPLX2Q6PUV4 134 aaKnown RBP17.89■□□□□ 0.45
UBR5-212ENST00000521922 TAF3Q5VWG9 929 aa17.88■□□□□ 0.45
UBR5-212ENST00000521922 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
UBR5-212ENST00000521922 KIAA0754O94854 1291 aa17.88■□□□□ 0.45
UBR5-212ENST00000521922 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
UBR5-212ENST00000521922 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
UBR5-212ENST00000521922 STK31Q9BXU1 1019 aa17.88■□□□□ 0.45
UBR5-212ENST00000521922 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
UBR5-212ENST00000521922 EZRP15311 586 aaKnown RBP17.87■□□□□ 0.45
UBR5-212ENST00000521922 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
UBR5-212ENST00000521922 GOLGA6L10A6NI86 522 aa17.87■□□□□ 0.45
UBR5-212ENST00000521922 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
UBR5-212ENST00000521922 CCDC97Q96F63 343 aaPredicted RBP17.86■□□□□ 0.45
UBR5-212ENST00000521922 GON4LQ3T8J9 2241 aa17.86■□□□□ 0.45
UBR5-212ENST00000521922 ERLIN2O94905 339 aa17.86■□□□□ 0.45
UBR5-212ENST00000521922 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
UBR5-212ENST00000521922 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
UBR5-212ENST00000521922 LRRFIP1Q32MZ4 808 aaKnown RBP17.85■□□□□ 0.45
UBR5-212ENST00000521922 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
UBR5-212ENST00000521922 NOL10Q9BSC4 688 aaKnown RBP17.85■□□□□ 0.45
UBR5-212ENST00000521922 AXDND1Q5T1B0 1012 aaPredicted RBP17.85■□□□□ 0.45
UBR5-212ENST00000521922 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
UBR5-212ENST00000521922 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
UBR5-212ENST00000521922 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
UBR5-212ENST00000521922 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.45
UBR5-212ENST00000521922 PAK3O75914 559 aaPredicted RBP17.83■□□□□ 0.45
UBR5-212ENST00000521922 TMF1P82094 1093 aa17.83■□□□□ 0.45
UBR5-212ENST00000521922 SASS6Q6UVJ0 657 aa17.83■□□□□ 0.44
UBR5-212ENST00000521922 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
UBR5-212ENST00000521922 CCAR1Q8IX12 1150 aaKnown RBP17.82■□□□□ 0.44
UBR5-212ENST00000521922 CSB-PGBD3P0DP91 1061 aa17.82■□□□□ 0.44
UBR5-212ENST00000521922 SLC4A10Q6U841 1118 aa17.82■□□□□ 0.44
UBR5-212ENST00000521922 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
UBR5-212ENST00000521922 PODXL2Q9NZ53 605 aa17.81■□□□□ 0.44
UBR5-212ENST00000521922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.8■□□□□ 0.44
UBR5-212ENST00000521922 RALBP1Q15311 655 aa17.8■□□□□ 0.44
UBR5-212ENST00000521922 DEF6Q9H4E7 631 aa17.8■□□□□ 0.44
UBR5-212ENST00000521922 FAM43AQ8N2R8 423 aa17.8■□□□□ 0.44
UBR5-212ENST00000521922 USP8P40818 1118 aa17.8■□□□□ 0.44
UBR5-212ENST00000521922 GIMAP7Q8NHV1 300 aa17.8■□□□□ 0.44
UBR5-212ENST00000521922 GSE1Q14687 1217 aa17.79■□□□□ 0.44
UBR5-212ENST00000521922 GBP2P32456 591 aaPredicted RBP17.79■□□□□ 0.44
UBR5-212ENST00000521922 RILPL2Q969X0 211 aa17.79■□□□□ 0.44
UBR5-212ENST00000521922 RCAN3Q9UKA8 241 aa17.79■□□□□ 0.44
UBR5-212ENST00000521922 HDGFP51858 240 aaKnown RBP17.79■□□□□ 0.44
UBR5-212ENST00000521922 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
UBR5-212ENST00000521922 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
UBR5-212ENST00000521922 BICD2Q8TD16 824 aa17.78■□□□□ 0.44
UBR5-212ENST00000521922 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
UBR5-212ENST00000521922 NAT10Q9H0A0 1025 aaKnown RBP17.78■□□□□ 0.44
UBR5-212ENST00000521922 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
UBR5-212ENST00000521922 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.44
UBR5-212ENST00000521922 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
UBR5-212ENST00000521922 CCDC9Q9Y3X0 531 aaKnown RBP17.77■□□□□ 0.43
UBR5-212ENST00000521922 CLIP1P30622 1438 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms