RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 LAPTM4BQ86VI4 370 aa9.85□□□□□ -0.83
ATP6V1C1-204ENST00000518959 PCDHGA10Q9Y5H3 936 aa9.85□□□□□ -0.83
ATP6V1C1-204ENST00000518959 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
ATP6V1C1-204ENST00000518959 TYW1BQ6NUM6 668 aa9.83□□□□□ -0.84
ATP6V1C1-204ENST00000518959 FBXW7Q969H0 707 aa9.83□□□□□ -0.84
ATP6V1C1-204ENST00000518959 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
ATP6V1C1-204ENST00000518959 WBP1LQ9NX94 342 aa9.83□□□□□ -0.84
ATP6V1C1-204ENST00000518959 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
ATP6V1C1-204ENST00000518959 SEPT9Q9UHD8 586 aaPredicted RBP9.8□□□□□ -0.84
ATP6V1C1-204ENST00000518959 PHF14O94880 888 aa9.79□□□□□ -0.84
ATP6V1C1-204ENST00000518959 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
ATP6V1C1-204ENST00000518959 EMILIN3Q9NT22 766 aa9.78□□□□□ -0.84
ATP6V1C1-204ENST00000518959 MFSD10Q14728 455 aa9.76□□□□□ -0.85
ATP6V1C1-204ENST00000518959 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
ATP6V1C1-204ENST00000518959 ONECUT3O60422 494 aaPredicted RBP9.75□□□□□ -0.85
ATP6V1C1-204ENST00000518959 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
ATP6V1C1-204ENST00000518959 TSR3Q9UJK0 312 aaKnown RBP9.75□□□□□ -0.85
ATP6V1C1-204ENST00000518959 HPS5Q9UPZ3 1129 aa9.75□□□□□ -0.85
ATP6V1C1-204ENST00000518959 GFRA3O60609 400 aa9.74□□□□□ -0.85
ATP6V1C1-204ENST00000518959 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
ATP6V1C1-204ENST00000518959 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
ATP6V1C1-204ENST00000518959 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
ATP6V1C1-204ENST00000518959 TRIM6-TRIM34B2RNG4 842 aa9.72□□□□□ -0.85
ATP6V1C1-204ENST00000518959 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
ATP6V1C1-204ENST00000518959 RBM33Q96EV2 1170 aaKnown RBP9.72□□□□□ -0.85
ATP6V1C1-204ENST00000518959 EPAS1Q99814 870 aa9.72□□□□□ -0.85
ATP6V1C1-204ENST00000518959 PPP4CP60510 307 aa9.68□□□□□ -0.86
ATP6V1C1-204ENST00000518959 PACS2Q86VP3 889 aa9.66□□□□□ -0.86
ATP6V1C1-204ENST00000518959 PRKD2Q9BZL6 878 aa9.66□□□□□ -0.86
ATP6V1C1-204ENST00000518959 DPYSL4O14531 572 aa9.65□□□□□ -0.86
ATP6V1C1-204ENST00000518959 DDX12PQ92771 950 aa9.64□□□□□ -0.87
ATP6V1C1-204ENST00000518959 LCE2BO14633 110 aa9.63□□□□□ -0.87
ATP6V1C1-204ENST00000518959 NRG2O14511 850 aaPredicted RBP9.62□□□□□ -0.87
ATP6V1C1-204ENST00000518959 MAP3K7O43318 606 aa9.61□□□□□ -0.87
ATP6V1C1-204ENST00000518959 DCAF8L2P0C7V8 631 aa9.61□□□□□ -0.87
ATP6V1C1-204ENST00000518959 CADPS2Q86UW7 1296 aa9.61□□□□□ -0.87
ATP6V1C1-204ENST00000518959 TJAP1Q5JTD0 557 aa9.6□□□□□ -0.87
ATP6V1C1-204ENST00000518959 NBR1Q14596 966 aa9.59□□□□□ -0.87
ATP6V1C1-204ENST00000518959 SAMD7Q7Z3H4 446 aa9.59□□□□□ -0.87
ATP6V1C1-204ENST00000518959 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
ATP6V1C1-204ENST00000518959 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
ATP6V1C1-204ENST00000518959 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
ATP6V1C1-204ENST00000518959 MTRQ99707 1265 aa9.58□□□□□ -0.88
ATP6V1C1-204ENST00000518959 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
ATP6V1C1-204ENST00000518959 SMAPO00193 183 aa9.57□□□□□ -0.88
ATP6V1C1-204ENST00000518959 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
ATP6V1C1-204ENST00000518959 ZNF787Q6DD87 383 aa9.57□□□□□ -0.88
ATP6V1C1-204ENST00000518959 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
ATP6V1C1-204ENST00000518959 EN1Q05925 392 aaPredicted RBP9.56□□□□□ -0.88
ATP6V1C1-204ENST00000518959 RNF40O75150 1001 aa9.55□□□□□ -0.88
ATP6V1C1-204ENST00000518959 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.54□□□□□ -0.88
ATP6V1C1-204ENST00000518959 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
ATP6V1C1-204ENST00000518959 HDGFP51858 240 aaKnown RBP9.53□□□□□ -0.88
ATP6V1C1-204ENST00000518959 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
ATP6V1C1-204ENST00000518959 NBPF26B4DH59 902 aa9.51□□□□□ -0.89
ATP6V1C1-204ENST00000518959 PRSS12P56730 875 aa9.51□□□□□ -0.89
ATP6V1C1-204ENST00000518959 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
ATP6V1C1-204ENST00000518959 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
ATP6V1C1-204ENST00000518959 GGCXP38435 758 aa9.5□□□□□ -0.89
ATP6V1C1-204ENST00000518959 TATDN2Q93075 761 aa9.49□□□□□ -0.89
ATP6V1C1-204ENST00000518959 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
ATP6V1C1-204ENST00000518959 FAM198AQ9UFP1 575 aa9.47□□□□□ -0.89
ATP6V1C1-204ENST00000518959 APLP1P51693 650 aa9.46□□□□□ -0.9
ATP6V1C1-204ENST00000518959 PDIA6Q15084 440 aa9.46□□□□□ -0.9
ATP6V1C1-204ENST00000518959 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
ATP6V1C1-204ENST00000518959 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
ATP6V1C1-204ENST00000518959 COPS2P61201 443 aa9.45□□□□□ -0.9
ATP6V1C1-204ENST00000518959 ZNF775Q96BV0 537 aaPredicted RBP9.45□□□□□ -0.9
ATP6V1C1-204ENST00000518959 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
ATP6V1C1-204ENST00000518959 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
ATP6V1C1-204ENST00000518959 C3orf80F5H4A9 247 aa9.43□□□□□ -0.9
ATP6V1C1-204ENST00000518959 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
ATP6V1C1-204ENST00000518959 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
ATP6V1C1-204ENST00000518959 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.9
ATP6V1C1-204ENST00000518959 SLF2Q8IX21 1173 aa9.39□□□□□ -0.91
ATP6V1C1-204ENST00000518959 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
ATP6V1C1-204ENST00000518959 PRIM1P49642 420 aaKnown RBP9.37□□□□□ -0.91
ATP6V1C1-204ENST00000518959 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
ATP6V1C1-204ENST00000518959 SLC19A1P41440 591 aa9.36□□□□□ -0.91
ATP6V1C1-204ENST00000518959 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
ATP6V1C1-204ENST00000518959 ZPR1O75312 459 aa9.35□□□□□ -0.91
ATP6V1C1-204ENST00000518959 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
ATP6V1C1-204ENST00000518959 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
ATP6V1C1-204ENST00000518959 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
ATP6V1C1-204ENST00000518959 E2F4Q16254 413 aa9.32□□□□□ -0.92
ATP6V1C1-204ENST00000518959 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
ATP6V1C1-204ENST00000518959 DGAT1O75907 488 aa9.31□□□□□ -0.92
ATP6V1C1-204ENST00000518959 MYT1Q01538 1121 aa9.31□□□□□ -0.92
ATP6V1C1-204ENST00000518959 PADI6Q6TGC4 694 aa9.31□□□□□ -0.92
ATP6V1C1-204ENST00000518959 OSBPP22059 807 aa9.3□□□□□ -0.92
ATP6V1C1-204ENST00000518959 TRIM67Q6ZTA4 783 aa9.3□□□□□ -0.92
ATP6V1C1-204ENST00000518959 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
ATP6V1C1-204ENST00000518959 FAM187AA6NFU0 413 aa9.28□□□□□ -0.92
ATP6V1C1-204ENST00000518959 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
ATP6V1C1-204ENST00000518959 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
ATP6V1C1-204ENST00000518959 POTECB2RU33 542 aa9.27□□□□□ -0.93
ATP6V1C1-204ENST00000518959 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
ATP6V1C1-204ENST00000518959 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
ATP6V1C1-204ENST00000518959 TLL1O43897 1013 aa9.25□□□□□ -0.93
ATP6V1C1-204ENST00000518959 PRR20EP86478 221 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 323.7 ms