RNA–Protein interactions for RNA: ENST00000517443.1

IGKV2-38-201, Transcript of immunoglobulin kappa variable 2-38 (pseudogene), humanhuman

BASIC

Gene IGKV2-38, Length 247 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-38-201ENST00000517443 ZDHHC16Q969W1 377 aa6.99□□□□□ -1.29
IGKV2-38-201ENST00000517443 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
IGKV2-38-201ENST00000517443 WBP1LQ9NX94 342 aa6.98□□□□□ -1.29
IGKV2-38-201ENST00000517443 NCKAP5LQ9HCH0 1330 aa6.98□□□□□ -1.29
IGKV2-38-201ENST00000517443 SOWAHBA6NEL2 793 aa6.97□□□□□ -1.29
IGKV2-38-201ENST00000517443 EVI5O60447 810 aa6.97□□□□□ -1.29
IGKV2-38-201ENST00000517443 PPP1R15BQ5SWA1 713 aa6.97□□□□□ -1.29
IGKV2-38-201ENST00000517443 TRAF7Q6Q0C0 670 aa6.96□□□□□ -1.3
IGKV2-38-201ENST00000517443 ANKK1Q8NFD2 765 aa6.96□□□□□ -1.3
IGKV2-38-201ENST00000517443 RABGEF1Q9UJ41 708 aa6.96□□□□□ -1.3
IGKV2-38-201ENST00000517443 PPP1R3GB7ZBB8 358 aa6.95□□□□□ -1.3
IGKV2-38-201ENST00000517443 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
IGKV2-38-201ENST00000517443 PCDHGA10Q9Y5H3 936 aa6.94□□□□□ -1.3
IGKV2-38-201ENST00000517443 GFRA3O60609 400 aa6.93□□□□□ -1.3
IGKV2-38-201ENST00000517443 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
IGKV2-38-201ENST00000517443 KCNC4Q03721 635 aa6.92□□□□□ -1.3
IGKV2-38-201ENST00000517443 HS6ST3Q8IZP7 471 aa6.92□□□□□ -1.3
IGKV2-38-201ENST00000517443 SEPT9Q9UHD8 586 aaPredicted RBP6.92□□□□□ -1.3
IGKV2-38-201ENST00000517443 KIAA1468Q9P260 1216 aa6.9□□□□□ -1.3
IGKV2-38-201ENST00000517443 LAPTM4AQ15012 233 aa6.89□□□□□ -1.31
IGKV2-38-201ENST00000517443 LAPTM4BQ86VI4 370 aa6.89□□□□□ -1.31
IGKV2-38-201ENST00000517443 EMILIN3Q9NT22 766 aa6.89□□□□□ -1.31
IGKV2-38-201ENST00000517443 RSF1Q96T23 1441 aaPredicted RBP6.87□□□□□ -1.31
IGKV2-38-201ENST00000517443 NYAP1Q6ZVC0 841 aa6.87□□□□□ -1.31
IGKV2-38-201ENST00000517443 NRG2O14511 850 aaPredicted RBP6.86□□□□□ -1.31
IGKV2-38-201ENST00000517443 ZNF775Q96BV0 537 aaPredicted RBP6.86□□□□□ -1.31
IGKV2-38-201ENST00000517443 PRKD2Q9BZL6 878 aa6.86□□□□□ -1.31
IGKV2-38-201ENST00000517443 HPS5Q9UPZ3 1129 aa6.85□□□□□ -1.31
IGKV2-38-201ENST00000517443 TJAP1Q5JTD0 557 aa6.84□□□□□ -1.31
IGKV2-38-201ENST00000517443 TSR3Q9UJK0 312 aaKnown RBP6.83□□□□□ -1.32
IGKV2-38-201ENST00000517443 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
IGKV2-38-201ENST00000517443 MFSD10Q14728 455 aa6.82□□□□□ -1.32
IGKV2-38-201ENST00000517443 FAM98CQ17RN3 349 aaKnown RBP6.82□□□□□ -1.32
IGKV2-38-201ENST00000517443 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
IGKV2-38-201ENST00000517443 TYW1BQ6NUM6 668 aa6.82□□□□□ -1.32
IGKV2-38-201ENST00000517443 PHF14O94880 888 aa6.81□□□□□ -1.32
IGKV2-38-201ENST00000517443 MAP3K9P80192 1104 aa6.81□□□□□ -1.32
IGKV2-38-201ENST00000517443 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
IGKV2-38-201ENST00000517443 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.81□□□□□ -1.32
IGKV2-38-201ENST00000517443 CHGAP10645 457 aaKnown RBP6.8□□□□□ -1.32
IGKV2-38-201ENST00000517443 C6orf132Q5T0Z8 1188 aa6.8□□□□□ -1.32
IGKV2-38-201ENST00000517443 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
IGKV2-38-201ENST00000517443 LRCH3Q96II8 777 aa6.8□□□□□ -1.32
IGKV2-38-201ENST00000517443 LARP6Q9BRS8 491 aaKnown RBP6.8□□□□□ -1.32
IGKV2-38-201ENST00000517443 NESP48681 1621 aa6.79□□□□□ -1.32
IGKV2-38-201ENST00000517443 ONECUT3O60422 494 aaPredicted RBP6.79□□□□□ -1.32
IGKV2-38-201ENST00000517443 PDE4AP27815 886 aa6.79□□□□□ -1.32
IGKV2-38-201ENST00000517443 FBXW7Q969H0 707 aa6.79□□□□□ -1.32
IGKV2-38-201ENST00000517443 TSKSQ9UJT2 592 aa6.79□□□□□ -1.32
IGKV2-38-201ENST00000517443 C3orf80F5H4A9 247 aa6.78□□□□□ -1.32
IGKV2-38-201ENST00000517443 ZNF516Q92618 1163 aa6.78□□□□□ -1.32
IGKV2-38-201ENST00000517443 MTRQ99707 1265 aa6.78□□□□□ -1.32
IGKV2-38-201ENST00000517443 V9GY48 417 aaPredicted RBP6.77□□□□□ -1.33
IGKV2-38-201ENST00000517443 ERCC6Q03468 1493 aa6.77□□□□□ -1.33
IGKV2-38-201ENST00000517443 POTECB2RU33 542 aa6.76□□□□□ -1.33
IGKV2-38-201ENST00000517443 TRIM67Q6ZTA4 783 aa6.76□□□□□ -1.33
IGKV2-38-201ENST00000517443 MROH2BQ7Z745 1585 aa6.76□□□□□ -1.33
IGKV2-38-201ENST00000517443 BAZ1AQ9NRL2 1556 aaPredicted RBP6.76□□□□□ -1.33
IGKV2-38-201ENST00000517443 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
IGKV2-38-201ENST00000517443 FAM198AQ9UFP1 575 aa6.75□□□□□ -1.33
IGKV2-38-201ENST00000517443 PDZRN3Q9UPQ7 1066 aa6.75□□□□□ -1.33
IGKV2-38-201ENST00000517443 CUX2O14529 1486 aa6.74□□□□□ -1.33
IGKV2-38-201ENST00000517443 SMAPO00193 183 aa6.74□□□□□ -1.33
IGKV2-38-201ENST00000517443 CADPS2Q86UW7 1296 aa6.74□□□□□ -1.33
IGKV2-38-201ENST00000517443 EMID1Q96A84 441 aaPredicted RBP6.74□□□□□ -1.33
IGKV2-38-201ENST00000517443 RBM33Q96EV2 1170 aaKnown RBP6.74□□□□□ -1.33
IGKV2-38-201ENST00000517443 GTPBP6O43824 516 aaPredicted RBP6.73□□□□□ -1.33
IGKV2-38-201ENST00000517443 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
IGKV2-38-201ENST00000517443 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
IGKV2-38-201ENST00000517443 SAMD7Q7Z3H4 446 aa6.73□□□□□ -1.33
IGKV2-38-201ENST00000517443 KIF21AQ7Z4S6 1674 aa6.73□□□□□ -1.33
IGKV2-38-201ENST00000517443 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.72□□□□□ -1.33
IGKV2-38-201ENST00000517443 APLP1P51693 650 aa6.71□□□□□ -1.34
IGKV2-38-201ENST00000517443 PPP4CP60510 307 aa6.71□□□□□ -1.34
IGKV2-38-201ENST00000517443 IL21Q9HBE4 155 aa6.71□□□□□ -1.34
IGKV2-38-201ENST00000517443 DDX12PQ92771 950 aa6.7□□□□□ -1.34
IGKV2-38-201ENST00000517443 EPAS1Q99814 870 aa6.7□□□□□ -1.34
IGKV2-38-201ENST00000517443 THOC2Q8NI27 1593 aaKnown RBP6.69□□□□□ -1.34
IGKV2-38-201ENST00000517443 DPYSL4O14531 572 aa6.69□□□□□ -1.34
IGKV2-38-201ENST00000517443 PRIM1P49642 420 aaKnown RBP6.69□□□□□ -1.34
IGKV2-38-201ENST00000517443 SMARCA2P51531 1590 aa6.69□□□□□ -1.34
IGKV2-38-201ENST00000517443 MYT1Q01538 1121 aa6.68□□□□□ -1.34
IGKV2-38-201ENST00000517443 SMARCA4P51532 1647 aa6.68□□□□□ -1.34
IGKV2-38-201ENST00000517443 WIZO95785 1651 aa6.68□□□□□ -1.34
IGKV2-38-201ENST00000517443 EN1Q05925 392 aaPredicted RBP6.67□□□□□ -1.34
IGKV2-38-201ENST00000517443 CAMK2BQ13554 666 aa6.67□□□□□ -1.34
IGKV2-38-201ENST00000517443 RYDENQ9NUL5 291 aaKnown RBP6.66□□□□□ -1.34
IGKV2-38-201ENST00000517443 TOP2AP11388 1531 aaKnown RBP6.66□□□□□ -1.34
IGKV2-38-201ENST00000517443 PACS2Q86VP3 889 aa6.64□□□□□ -1.35
IGKV2-38-201ENST00000517443 CDCA7LQ96GN5 454 aa6.64□□□□□ -1.35
IGKV2-38-201ENST00000517443 COPS2P61201 443 aa6.63□□□□□ -1.35
IGKV2-38-201ENST00000517443 NBR1Q14596 966 aa6.63□□□□□ -1.35
IGKV2-38-201ENST00000517443 MAP3K7O43318 606 aa6.62□□□□□ -1.35
IGKV2-38-201ENST00000517443 PRSS12P56730 875 aa6.61□□□□□ -1.35
IGKV2-38-201ENST00000517443 TATDN2Q93075 761 aa6.61□□□□□ -1.35
IGKV2-38-201ENST00000517443 PEG3Q9GZU2 1588 aa6.61□□□□□ -1.35
IGKV2-38-201ENST00000517443 CCDC88BA6NC98 1476 aa6.6□□□□□ -1.35
IGKV2-38-201ENST00000517443 LOC105371045A0A1W2PR82 267 aa6.6□□□□□ -1.35
IGKV2-38-201ENST00000517443 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
IGKV2-38-201ENST00000517443 ST8SIA5O15466 376 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms