RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 FEZ2Q9UHY8 353 aaPredicted RBP3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 NUB1Q9Y5A7 615 aa3.75□□□□□ -1.81
RNU6-56P-201ENST00000516986 SH3BP5O60239 455 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 SSR1P43307 286 aaKnown RBP3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 IRX3P78415 501 aaPredicted RBP3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 FOXD4L6Q3SYB3 417 aaPredicted RBP3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 FOXD4L3Q6VB84 417 aaPredicted RBP3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 PPARGC1BQ86YN6 1023 aaKnown RBP3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 SMC5Q8IY18 1101 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 CXorf38Q8TB03 319 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 MICAL1Q8TDZ2 1067 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 TRIM41Q8WV44 630 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 SGSM3Q96HU1 749 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 KCNG1Q9UIX4 513 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 HDAC5Q9UQL6 1122 aa3.74□□□□□ -1.81
RNU6-56P-201ENST00000516986 SPDYE4A6NLX3 237 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 CCER2I3L3R5 266 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 GTF2E1P29083 439 aaPredicted RBP3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 IRF5Q13568 498 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 TAF3Q5VWG9 929 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 HS6ST3Q8IZP7 471 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 SDR16C5Q8N3Y7 309 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 NME8Q8N427 588 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 UBXN4Q92575 508 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 CCDC85AQ96PX6 553 aaPredicted RBP3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 SUGT1Q9Y2Z0 365 aa3.73□□□□□ -1.81
RNU6-56P-201ENST00000516986 RIOK3O14730 519 aaKnown RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 PPP1R15AO75807 674 aaPredicted RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 CALD1Q05682 793 aaKnown RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 SF3A1Q15459 793 aaKnown RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 NBPF9Q3BBW0 867 aa3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 HSP90AB3PQ58FF7 597 aa3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 ZFYVE27Q5T4F4 411 aa3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 MSL3Q8N5Y2 521 aaKnown RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 AK7Q96M32 723 aa3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 ATP1B4Q9UN42 357 aaPredicted RBP3.72□□□□□ -1.81
RNU6-56P-201ENST00000516986 EXOC5O00471 708 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 TCERG1O14776 1098 aaKnown RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 ZMYND10O75800 440 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 CCAR1Q8IX12 1150 aaKnown RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 OTUD6BQ8N6M0 293 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 SNRNP27Q8WVK2 155 aaKnown RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 MKL1Q969V6 931 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 STAC3Q96MF2 364 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 TSPAN18Q96SJ8 248 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 KDM4CQ9H3R0 1056 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 GPBP1L1Q9HC44 474 aaPredicted RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 RYDENQ9NUL5 291 aaKnown RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 PPP1R1BQ9UD71 204 aaPredicted RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 ZNF777Q9ULD5 760 aaPredicted RBP3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 FRMD4BQ9Y2L6 1034 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 COMMD10Q9Y6G5 202 aa3.71□□□□□ -1.82
RNU6-56P-201ENST00000516986 CREB3O43889 395 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 COPB2P35606 906 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 HSP90AB2PQ58FF8 381 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 SMYD5Q6GMV2 418 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 CACTIN-AS1Q8N1I8 211 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 C8orf37Q96NL8 207 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 SPINK5Q9NQ38 1064 aaPredicted RBP3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 IGSF5Q9NSI5 407 aa3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 ZBTB47Q9UFB7 747 aaPredicted RBP3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 CENPJQ9HC77 1338 aaPredicted RBP3.7□□□□□ -1.82
RNU6-56P-201ENST00000516986 RBM47A0AV96 593 aaKnown RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 TESPA1A2RU30 521 aaPredicted RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 IBSPP21815 317 aaPredicted RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 CCDC96Q2M329 555 aa3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 ZNF280DQ6N043 979 aa3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 PNISRQ8TF01 805 aaKnown RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 CLUAP1Q96AJ1 413 aa3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 RBM28Q9NW13 759 aaKnown RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 BSDC1Q9NW68 430 aaPredicted RBP3.69□□□□□ -1.82
RNU6-56P-201ENST00000516986 RAB11FIP3O75154 756 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 PEX14O75381 377 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 TNNT2P45379 298 aaPredicted RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 IGBP1P78318 339 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 FOXD4Q12950 439 aaPredicted RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 CSPP1Q1MSJ5 1256 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 NBPF6Q5VWK0 638 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 SND1Q7KZF4 910 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 ARMCX6Q7L4S7 300 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 PROSER2Q86WR7 435 aaPredicted RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 NBPF5PQ86XG9 351 aaPredicted RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 KRI1Q8N9T8 703 aaKnown RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 NBPF4Q96M43 638 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 CEP126Q9P2H0 1117 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 WWC3Q9ULE0 1092 aa3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 CIZ1Q9ULV3 898 aaPredicted RBP3.68□□□□□ -1.82
RNU6-56P-201ENST00000516986 UNCXA6NJT0 531 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 WDHD1O75717 1129 aaPredicted RBP3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 POLD1P28340 1107 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 FOSBP53539 338 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 NEUROD1Q13562 356 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 ZRSR2Q15696 482 aaKnown RBP3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 GJC2Q5T442 439 aaPredicted RBP3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 AMOTL1Q8IY63 956 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 HELBQ8NG08 1087 aaPredicted RBP3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 KCNV2Q8TDN2 545 aa3.67□□□□□ -1.82
RNU6-56P-201ENST00000516986 MRRFQ96E11 262 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms