RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 NKX2-3Q8TAU0 364 aa3.6□□□□□ -1.83
RNU6-557P-201ENST00000516842 ADAM33Q9BZ11 813 aa3.6□□□□□ -1.83
RNU6-557P-201ENST00000516842 HPS5Q9UPZ3 1129 aa3.6□□□□□ -1.83
RNU6-557P-201ENST00000516842 C11orf95C9JLR9 678 aaPredicted RBP3.59□□□□□ -1.83
RNU6-557P-201ENST00000516842 SEPT9Q9UHD8 586 aaPredicted RBP3.59□□□□□ -1.83
RNU6-557P-201ENST00000516842 TNFRSF10AO00220 468 aa3.58□□□□□ -1.84
RNU6-557P-201ENST00000516842 FOSBP53539 338 aa3.58□□□□□ -1.84
RNU6-557P-201ENST00000516842 PLPP6Q8IY26 295 aa3.58□□□□□ -1.84
RNU6-557P-201ENST00000516842 EMID1Q96A84 441 aaPredicted RBP3.58□□□□□ -1.84
RNU6-557P-201ENST00000516842 RABGEF1Q9UJ41 708 aa3.58□□□□□ -1.84
RNU6-557P-201ENST00000516842 COL9A1P20849 921 aa3.57□□□□□ -1.84
RNU6-557P-201ENST00000516842 MTRQ99707 1265 aa3.57□□□□□ -1.84
RNU6-557P-201ENST00000516842 MFRPQ9BY79 579 aa3.57□□□□□ -1.84
RNU6-557P-201ENST00000516842 TSR3Q9UJK0 312 aaKnown RBP3.57□□□□□ -1.84
RNU6-557P-201ENST00000516842 FAM181BA6NEQ2 426 aa3.56□□□□□ -1.84
RNU6-557P-201ENST00000516842 UPF1Q92900 1129 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU6-557P-201ENST00000516842 KIAA1468Q9P260 1216 aa3.56□□□□□ -1.84
RNU6-557P-201ENST00000516842 TERTO14746 1132 aaKnown RBP3.55□□□□□ -1.84
RNU6-557P-201ENST00000516842 TBC1D12O60347 775 aa3.55□□□□□ -1.84
RNU6-557P-201ENST00000516842 RNF25Q96BH1 459 aaPredicted RBP3.55□□□□□ -1.84
RNU6-557P-201ENST00000516842 PSMG3-AS1Q96PY0 264 aa3.55□□□□□ -1.84
RNU6-557P-201ENST00000516842 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.55□□□□□ -1.84
RNU6-557P-201ENST00000516842 LAPTM4BQ86VI4 370 aa3.54□□□□□ -1.84
RNU6-557P-201ENST00000516842 ZSCAN1Q8NBB4 408 aa3.54□□□□□ -1.84
RNU6-557P-201ENST00000516842 SNRPBP14678 240 aaKnown RBP3.53□□□□□ -1.84
RNU6-557P-201ENST00000516842 SLC19A1P41440 591 aa3.53□□□□□ -1.84
RNU6-557P-201ENST00000516842 GSK3AP49840 483 aa3.53□□□□□ -1.84
RNU6-557P-201ENST00000516842 VASPP50552 380 aaPredicted RBP3.53□□□□□ -1.84
RNU6-557P-201ENST00000516842 IL21Q9HBE4 155 aa3.53□□□□□ -1.84
RNU6-557P-201ENST00000516842 PPP1R37O75864 691 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 GMPRP36959 345 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 FOXK1P85037 733 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 PRR20EP86478 221 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 PRR20CP86479 221 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 PRR20DP86480 221 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 PRR20BP86481 221 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 PRR20AP86496 221 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 DSG2Q14126 1118 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 ZDHHC16Q969W1 377 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 LRCH3Q96II8 777 aa3.52□□□□□ -1.85
RNU6-557P-201ENST00000516842 GDF9O60383 454 aa3.51□□□□□ -1.85
RNU6-557P-201ENST00000516842 PPP4CP60510 307 aa3.51□□□□□ -1.85
RNU6-557P-201ENST00000516842 SPRYD7Q5W111 196 aa3.51□□□□□ -1.85
RNU6-557P-201ENST00000516842 OXER1Q8TDS5 423 aa3.51□□□□□ -1.85
RNU6-557P-201ENST00000516842 PPP1R3GB7ZBB8 358 aa3.5□□□□□ -1.85
RNU6-557P-201ENST00000516842 RIOK3O14730 519 aaKnown RBP3.5□□□□□ -1.85
RNU6-557P-201ENST00000516842 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
RNU6-557P-201ENST00000516842 ZNF598Q86UK7 904 aaKnown RBP3.5□□□□□ -1.85
RNU6-557P-201ENST00000516842 ZNF697Q5TEC3 545 aa3.49□□□□□ -1.85
RNU6-557P-201ENST00000516842 SPOCK2Q92563 424 aa3.49□□□□□ -1.85
RNU6-557P-201ENST00000516842 JPH4Q96JJ6 628 aa3.49□□□□□ -1.85
RNU6-557P-201ENST00000516842 BCL11BQ9C0K0 894 aaPredicted RBP3.49□□□□□ -1.85
RNU6-557P-201ENST00000516842 RNF223E7ERA6 249 aa3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 VGFO15240 615 aaPredicted RBP3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 FAM98CQ17RN3 349 aaKnown RBP3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 LIAT1Q6ZQX7 453 aa3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
RNU6-557P-201ENST00000516842 PPEF1O14829 653 aaPredicted RBP3.47□□□□□ -1.85
RNU6-557P-201ENST00000516842 AXIN1O15169 862 aa3.47□□□□□ -1.85
RNU6-557P-201ENST00000516842 COPS2P61201 443 aa3.47□□□□□ -1.85
RNU6-557P-201ENST00000516842 FKBP8Q14318 412 aa3.47□□□□□ -1.85
RNU6-557P-201ENST00000516842 CRIPAKQ8N1N5 446 aa3.47□□□□□ -1.85
RNU6-557P-201ENST00000516842 GGCXP38435 758 aa3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 VEGFBP49765 207 aa3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 KCNMA1Q12791 1236 aa3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 IFNLR1Q8IU57 520 aaPredicted RBP3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 GPHNQ9NQX3 736 aaPredicted RBP3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 STK24Q9Y6E0 443 aa3.46□□□□□ -1.86
RNU6-557P-201ENST00000516842 APLP1P51693 650 aa3.45□□□□□ -1.86
RNU6-557P-201ENST00000516842 FOXC1Q12948 553 aa3.45□□□□□ -1.86
RNU6-557P-201ENST00000516842 ANO8Q9HCE9 1232 aaPredicted RBP3.45□□□□□ -1.86
RNU6-557P-201ENST00000516842 FBXO3Q9UK99 471 aa3.45□□□□□ -1.86
RNU6-557P-201ENST00000516842 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 GDF11O95390 407 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 SAMD7Q7Z3H4 446 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 TMEM151AQ8N4L1 468 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 TMUB1Q9BVT8 246 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 PCDHGA10Q9Y5H3 936 aa3.44□□□□□ -1.86
RNU6-557P-201ENST00000516842 EVI5O60447 810 aa3.43□□□□□ -1.86
RNU6-557P-201ENST00000516842 GPAT2Q6NUI2 795 aa3.43□□□□□ -1.86
RNU6-557P-201ENST00000516842 PKD2L1Q9P0L9 805 aa3.43□□□□□ -1.86
RNU6-557P-201ENST00000516842 ERBB4Q15303 1308 aa3.43□□□□□ -1.86
RNU6-557P-201ENST00000516842 TRIM6-TRIM34B2RNG4 842 aa3.42□□□□□ -1.86
RNU6-557P-201ENST00000516842 SMAPO00193 183 aa3.42□□□□□ -1.86
RNU6-557P-201ENST00000516842 AVPP01185 164 aa3.42□□□□□ -1.86
RNU6-557P-201ENST00000516842 RASSF7Q02833 373 aa3.42□□□□□ -1.86
RNU6-557P-201ENST00000516842 SLC16A10Q8TF71 515 aa3.41□□□□□ -1.86
RNU6-557P-201ENST00000516842 ATP13A2Q9NQ11 1180 aa3.41□□□□□ -1.86
RNU6-557P-201ENST00000516842 RNF40O75150 1001 aa3.4□□□□□ -1.87
RNU6-557P-201ENST00000516842 PLA2G2CQ5R387 149 aa3.4□□□□□ -1.87
RNU6-557P-201ENST00000516842 TRIM47Q96LD4 638 aa3.4□□□□□ -1.87
RNU6-557P-201ENST00000516842 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
RNU6-557P-201ENST00000516842 TLL1O43897 1013 aa3.39□□□□□ -1.87
RNU6-557P-201ENST00000516842 ZPR1O75312 459 aa3.39□□□□□ -1.87
RNU6-557P-201ENST00000516842 TRIM41Q8WV44 630 aa3.39□□□□□ -1.87
RNU6-557P-201ENST00000516842 C3orf80F5H4A9 247 aa3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 ONECUT3O60422 494 aaPredicted RBP3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 SMCPP49901 116 aaPredicted RBP3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 IRF7Q92985 503 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms