RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 MYBBP1AQ9BQG0 1328 aaKnown RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 AKNAQ7Z591 1439 aa2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 SMG6Q86US8 1419 aaKnown RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 CANXP27824 592 aaKnown RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 PKD2Q13563 968 aa2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 NBR1Q14596 966 aa2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 GLIPR1L2Q4G1C9 344 aa2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 PNISRQ8TF01 805 aaKnown RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 CFAP44Q96MT7 982 aa2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 BRD4O60885 1362 aaPredicted RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 PCF11O94913 1555 aaKnown RBP2.68□□□□□ -1.98
RNU1-40P-201ENST00000516816 GCC2Q8IWJ2 1684 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 ITSN2Q9NZM3 1697 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 POLA1P09884 1462 aaPredicted RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 TCOF1Q13428 1488 aaKnown RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 RAD54L2Q9Y4B4 1467 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 NUP155O75694 1391 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 CAPN15O75808 1086 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 PTMSP20962 102 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 PDE4AP27815 886 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 POLA2Q14181 598 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 CENPQQ7L2Z9 268 aaPredicted RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 ANP32BQ92688 251 aaKnown RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 ZNF692Q9BU19 519 aaPredicted RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 EPRSP07814 1512 aaKnown RBP2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 NCOA1Q15788 1441 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 KIF7Q2M1P5 1343 aa2.67□□□□□ -1.98
RNU1-40P-201ENST00000516816 IQGAP2Q13576 1575 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 GRIN2BQ13224 1484 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 RPRD2Q5VT52 1461 aaKnown RBP2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 ANKRD30BQ9BXX2 1392 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 ST20-MTHFSA0A0A6YYL1 179 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 TRHP20396 242 aaPredicted RBP2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 RRP1P56182 461 aaKnown RBP2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 GOLGA2Q08379 1002 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 L1TD1Q5T7N2 865 aaKnown RBP2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 PMFBP1Q8TBY8 1022 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 JPH4Q96JJ6 628 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 CFAP53Q96M91 514 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 RNF39Q9H2S5 420 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 RWDD1Q9H446 243 aaPredicted RBP2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 NESP48681 1621 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 UGGT2Q9NYU1 1516 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 DAPK1P53355 1430 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 KIAA1107Q9UPP5 1409 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 ADGBQ8N7X0 1667 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 SAMD9Q5K651 1589 aa2.66□□□□□ -1.98
RNU1-40P-201ENST00000516816 INSRP06213 1382 aa2.65□□□□□ -1.98
RNU1-40P-201ENST00000516816 KANK1Q14678 1352 aa2.65□□□□□ -1.98
RNU1-40P-201ENST00000516816 USP47Q96K76 1375 aa2.65□□□□□ -1.98
RNU1-40P-201ENST00000516816 KIAA0586Q9BVV6 1533 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 ARID3CA6NKF2 412 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 ECM2O94769 699 aaPredicted RBP2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 NPM1P06748 294 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 HMGB1P09429 215 aaKnown RBP2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 FAM161AQ3B820 660 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 NBPF8Q3BBV2 869 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 RGL3Q3MIN7 710 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 EFCAB2Q5VUJ9 269 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 BACH2Q9BYV9 841 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 SALL2Q9Y467 1007 aaPredicted RBP2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 PBRM1Q86U86 1689 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 RNF123Q5XPI4 1314 aa2.65□□□□□ -1.99
RNU1-40P-201ENST00000516816 DNMT1P26358 1616 aaKnown RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 EIF3AQ14152 1382 aaKnown RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 C11orf95C9JLR9 678 aaPredicted RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 E9PSI1 815 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 IPO8O15397 1037 aaKnown RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 HNRNPMP52272 730 aaKnown RBP eCLIP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 CC2D1BQ5T0F9 858 aaKnown RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 C14orf37Q86TY3 774 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 RBM42Q9BTD8 480 aaKnown RBP2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 PANK3Q9H999 370 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 CCDC144AA2RUR9 1427 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 ANKRD50Q9ULJ7 1429 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 CGNL1Q0VF96 1302 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 MAPK8IP3Q9UPT6 1336 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 SNAPC4Q5SXM2 1469 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 PLEKHH2Q8IVE3 1493 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 IFT140Q96RY7 1462 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 RAPGEF6Q8TEU7 1601 aa2.64□□□□□ -1.99
RNU1-40P-201ENST00000516816 TROQ12816 1431 aaPredicted RBP2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 GOLGA6L22H0YM25 854 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 HSP90AA1P07900 732 aaKnown RBP2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 PDE3AQ14432 1141 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 SKOR2Q2VWA4 1001 aaPredicted RBP2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 EXOC6Q8TAG9 804 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 RSPH6AQ9H0K4 717 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 MYH16Q9H6N6 1097 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 ABCA5Q8WWZ7 1642 aa2.63□□□□□ -1.99
RNU1-40P-201ENST00000516816 NINLQ9Y2I6 1382 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 LRRIQ1Q96JM4 1722 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 ABCC5O15440 1437 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 PTPRKQ15262 1439 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 UHRF1BP1Q6BDS2 1440 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 CT47B1P0C2W7 299 aaPredicted RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 HDGFP51858 240 aaKnown RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 CALD1Q05682 793 aaKnown RBP2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 CCDC184Q52MB2 194 aa2.62□□□□□ -1.99
RNU1-40P-201ENST00000516816 CASC1Q6TDU7 716 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms