RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 PROX2Q3B8N5 592 aa8.91□□□□□ -0.98
RNU6-1046P-201ENST00000516538 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
RNU6-1046P-201ENST00000516538 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1046P-201ENST00000516538 TYW1BQ6NUM6 668 aa8.9□□□□□ -0.98
RNU6-1046P-201ENST00000516538 ZFRQ96KR1 1074 aaKnown RBP8.89□□□□□ -0.99
RNU6-1046P-201ENST00000516538 PHF14O94880 888 aa8.88□□□□□ -0.99
RNU6-1046P-201ENST00000516538 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
RNU6-1046P-201ENST00000516538 ONECUT3O60422 494 aaPredicted RBP8.87□□□□□ -0.99
RNU6-1046P-201ENST00000516538 COL9A1P20849 921 aa8.86□□□□□ -0.99
RNU6-1046P-201ENST00000516538 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
RNU6-1046P-201ENST00000516538 MFSD10Q14728 455 aa8.85□□□□□ -0.99
RNU6-1046P-201ENST00000516538 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
RNU6-1046P-201ENST00000516538 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
RNU6-1046P-201ENST00000516538 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
RNU6-1046P-201ENST00000516538 EPAS1Q99814 870 aa8.83□□□□□ -1
RNU6-1046P-201ENST00000516538 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
RNU6-1046P-201ENST00000516538 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
RNU6-1046P-201ENST00000516538 SEPT9Q9UHD8 586 aaPredicted RBP8.82□□□□□ -1
RNU6-1046P-201ENST00000516538 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
RNU6-1046P-201ENST00000516538 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
RNU6-1046P-201ENST00000516538 TRIM6-TRIM34B2RNG4 842 aa8.8□□□□□ -1
RNU6-1046P-201ENST00000516538 GFRA3O60609 400 aa8.79□□□□□ -1
RNU6-1046P-201ENST00000516538 C6orf132Q5T0Z8 1188 aa8.78□□□□□ -1
RNU6-1046P-201ENST00000516538 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
RNU6-1046P-201ENST00000516538 GTPBP6O43824 516 aaPredicted RBP8.77□□□□□ -1.01
RNU6-1046P-201ENST00000516538 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
RNU6-1046P-201ENST00000516538 PPP4CP60510 307 aa8.74□□□□□ -1.01
RNU6-1046P-201ENST00000516538 NRG2O14511 850 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1046P-201ENST00000516538 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
RNU6-1046P-201ENST00000516538 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
RNU6-1046P-201ENST00000516538 DPYSL4O14531 572 aa8.7□□□□□ -1.02
RNU6-1046P-201ENST00000516538 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1046P-201ENST00000516538 MAP3K7O43318 606 aa8.68□□□□□ -1.02
RNU6-1046P-201ENST00000516538 CAMK2BQ13554 666 aa8.68□□□□□ -1.02
RNU6-1046P-201ENST00000516538 DDX12PQ92771 950 aa8.68□□□□□ -1.02
RNU6-1046P-201ENST00000516538 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
RNU6-1046P-201ENST00000516538 NBR1Q14596 966 aa8.67□□□□□ -1.02
RNU6-1046P-201ENST00000516538 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1046P-201ENST00000516538 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
RNU6-1046P-201ENST00000516538 LCE2BO14633 110 aa8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 SAMD7Q7Z3H4 446 aa8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 MTRQ99707 1265 aa8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
RNU6-1046P-201ENST00000516538 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
RNU6-1046P-201ENST00000516538 GGCXP38435 758 aa8.64□□□□□ -1.03
RNU6-1046P-201ENST00000516538 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
RNU6-1046P-201ENST00000516538 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
RNU6-1046P-201ENST00000516538 NECTIN2Q92692 538 aa8.64□□□□□ -1.03
RNU6-1046P-201ENST00000516538 ZNF787Q6DD87 383 aa8.63□□□□□ -1.03
RNU6-1046P-201ENST00000516538 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
RNU6-1046P-201ENST00000516538 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.63□□□□□ -1.03
RNU6-1046P-201ENST00000516538 RNF40O75150 1001 aa8.62□□□□□ -1.03
RNU6-1046P-201ENST00000516538 TSR1Q2NL82 804 aaKnown RBP8.61□□□□□ -1.03
RNU6-1046P-201ENST00000516538 CDCA7LQ96GN5 454 aa8.61□□□□□ -1.03
RNU6-1046P-201ENST00000516538 PDZRN3Q9UPQ7 1066 aa8.61□□□□□ -1.03
RNU6-1046P-201ENST00000516538 PRSS12P56730 875 aa8.6□□□□□ -1.03
RNU6-1046P-201ENST00000516538 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
RNU6-1046P-201ENST00000516538 SMAPO00193 183 aa8.59□□□□□ -1.03
RNU6-1046P-201ENST00000516538 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
RNU6-1046P-201ENST00000516538 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
RNU6-1046P-201ENST00000516538 PDIA6Q15084 440 aa8.58□□□□□ -1.04
RNU6-1046P-201ENST00000516538 TATDN2Q93075 761 aa8.57□□□□□ -1.04
RNU6-1046P-201ENST00000516538 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
RNU6-1046P-201ENST00000516538 TMUB1Q9BVT8 246 aa8.54□□□□□ -1.04
RNU6-1046P-201ENST00000516538 APLP1P51693 650 aa8.53□□□□□ -1.04
RNU6-1046P-201ENST00000516538 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
RNU6-1046P-201ENST00000516538 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
RNU6-1046P-201ENST00000516538 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
RNU6-1046P-201ENST00000516538 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
RNU6-1046P-201ENST00000516538 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
RNU6-1046P-201ENST00000516538 FAM198AQ9UFP1 575 aa8.51□□□□□ -1.05
RNU6-1046P-201ENST00000516538 COPS2P61201 443 aa8.5□□□□□ -1.05
RNU6-1046P-201ENST00000516538 GRXCR2A6NFK2 248 aa8.49□□□□□ -1.05
RNU6-1046P-201ENST00000516538 PKDCCQ504Y2 493 aa8.49□□□□□ -1.05
RNU6-1046P-201ENST00000516538 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
RNU6-1046P-201ENST00000516538 ZPR1O75312 459 aa8.46□□□□□ -1.06
RNU6-1046P-201ENST00000516538 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
RNU6-1046P-201ENST00000516538 SLC19A1P41440 591 aa8.45□□□□□ -1.06
RNU6-1046P-201ENST00000516538 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
RNU6-1046P-201ENST00000516538 DGAT1O75907 488 aa8.44□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
RNU6-1046P-201ENST00000516538 E2F4Q16254 413 aa8.43□□□□□ -1.06
RNU6-1046P-201ENST00000516538 CDHR5Q9HBB8 845 aa8.43□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRIM1P49642 420 aaKnown RBP8.41□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PADI6Q6TGC4 694 aa8.41□□□□□ -1.06
RNU6-1046P-201ENST00000516538 WDR70Q9NW82 654 aa8.41□□□□□ -1.06
RNU6-1046P-201ENST00000516538 RNF223E7ERA6 249 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRR20EP86478 221 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRR20CP86479 221 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRR20DP86480 221 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRR20BP86481 221 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 PRR20AP86496 221 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 MYT1Q01538 1121 aa8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 ZNF598Q86UK7 904 aaKnown RBP8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
RNU6-1046P-201ENST00000516538 OSBPP22059 807 aa8.39□□□□□ -1.07
RNU6-1046P-201ENST00000516538 SPRYD7Q5W111 196 aa8.39□□□□□ -1.07
RNU6-1046P-201ENST00000516538 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms