RNA–Protein interactions for RNA: ENST00000516381.1

SCARNA17.3-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 125 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.3-201ENST00000516381 AAASQ9NRG9 546 aa1.92□□□□□ -2.1
SCARNA17.3-201ENST00000516381 TSR3Q9UJK0 312 aaKnown RBP1.92□□□□□ -2.1
SCARNA17.3-201ENST00000516381 HPS5Q9UPZ3 1129 aa1.92□□□□□ -2.1
SCARNA17.3-201ENST00000516381 FAM187AA6NFU0 413 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 PPP1R3GB7ZBB8 358 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 VGFO15240 615 aaPredicted RBP1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 COL9A1P20849 921 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 DSG2Q14126 1118 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 FKBP8Q14318 412 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 OXER1Q8TDS5 423 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 ZNF516Q92618 1163 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 UPF1Q92900 1129 aaKnown RBP eCLIP1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 ZDHHC16Q969W1 377 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 MTRQ99707 1265 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 KRTAP4-8Q9BYQ9 185 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 BCL11BQ9C0K0 894 aaPredicted RBP1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 KIAA1468Q9P260 1216 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 SEPT9Q9UHD8 586 aaPredicted RBP1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 DACH1Q9UI36 760 aa1.91□□□□□ -2.1
SCARNA17.3-201ENST00000516381 FAM181BA6NEQ2 426 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 C11orf95C9JLR9 678 aaPredicted RBP1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PRR20EP86478 221 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PRR20CP86479 221 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PRR20DP86480 221 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PRR20BP86481 221 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PRR20AP86496 221 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 XP32Q5T750 250 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 IFNLR1Q8IU57 520 aaPredicted RBP1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 NKX2-3Q8TAU0 364 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 TRIM41Q8WV44 630 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 EMID1Q96A84 441 aaPredicted RBP1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 LRCH3Q96II8 777 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 JPH4Q96JJ6 628 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 IL21Q9HBE4 155 aa1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GMPR2Q9P2T1 348 aaKnown RBP1.9□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KRTAP9-6A0A140TA67 174 aa1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 TNFRSF10AO00220 468 aa1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PPP1R37O75864 691 aa1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 LORP23490 312 aaPredicted RBP1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 SLC19A1P41440 591 aa1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 FAM98CQ17RN3 349 aaKnown RBP1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KRTAP9-2Q9BYQ4 174 aa1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GPHNQ9NQX3 736 aaPredicted RBP1.89□□□□□ -2.11
SCARNA17.3-201ENST00000516381 TERTO14746 1132 aaKnown RBP1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PPP4CP60510 307 aa1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 SPRYD7Q5W111 196 aa1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 ZNF598Q86UK7 904 aaKnown RBP1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KCTD17Q8N5Z5 321 aa1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 ANO8Q9HCE9 1232 aaPredicted RBP1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 STK24Q9Y6E0 443 aa1.88□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GDF9O60383 454 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GGCXP38435 758 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KRTAP1-3Q8IUG1 177 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 CRIPAKQ8N1N5 446 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 ZSCAN1Q8NBB4 408 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 TMUB1Q9BVT8 246 aa1.87□□□□□ -2.11
SCARNA17.3-201ENST00000516381 RNF223E7ERA6 249 aa1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 ONECUT3O60422 494 aaPredicted RBP1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 EVI5O60447 810 aa1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 SNRPBP14678 240 aaKnown RBP1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 ZNF697Q5TEC3 545 aa1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PCDHGA10Q9Y5H3 936 aa1.86□□□□□ -2.11
SCARNA17.3-201ENST00000516381 TRIM6-TRIM34B2RNG4 842 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 STK25O00506 426 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 AXIN1O15169 862 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GMPRP36959 345 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 GSK3AP49840 483 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 APLP1P51693 650 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 LIAT1Q6ZQX7 453 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 SAMD7Q7Z3H4 446 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PSMG3-AS1Q96PY0 264 aa1.85□□□□□ -2.11
SCARNA17.3-201ENST00000516381 AVPP01185 164 aa1.84□□□□□ -2.11
SCARNA17.3-201ENST00000516381 COPS2P61201 443 aa1.84□□□□□ -2.11
SCARNA17.3-201ENST00000516381 KCNMA1Q12791 1236 aa1.84□□□□□ -2.11
SCARNA17.3-201ENST00000516381 PPEF1O14829 653 aaPredicted RBP1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 ZPR1O75312 459 aa1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 SMCPP49901 116 aaPredicted RBP1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 TYW1BQ6NUM6 668 aa1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 ANKLE1Q8NAG6 615 aa1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 PKD2L1Q9P0L9 805 aa1.83□□□□□ -2.12
SCARNA17.3-201ENST00000516381 SMAPO00193 183 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 FOXC1Q12948 553 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 CTC1Q2NKJ3 1217 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 PPP1R15BQ5SWA1 713 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 C6orf132Q5T0Z8 1188 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 SLC16A10Q8TF71 515 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 FBXW7Q969H0 707 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 TRIM47Q96LD4 638 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 ATP13A2Q9NQ11 1180 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 TOR4AQ9NXH8 423 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 TSKSQ9UJT2 592 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 TAOK2Q9UL54 1235 aa1.82□□□□□ -2.12
SCARNA17.3-201ENST00000516381 RNF40O75150 1001 aa1.81□□□□□ -2.12
SCARNA17.3-201ENST00000516381 PHF14O94880 888 aa1.81□□□□□ -2.12
SCARNA17.3-201ENST00000516381 GDF11O95390 407 aa1.81□□□□□ -2.12
SCARNA17.3-201ENST00000516381 RASSF7Q02833 373 aa1.81□□□□□ -2.12
SCARNA17.3-201ENST00000516381 PLA2G2CQ5R387 149 aa1.81□□□□□ -2.12
SCARNA17.3-201ENST00000516381 LCE3BQ5TA77 95 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms