RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 TTC13Q8NBP0 860 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP2-2Q9BYT5 123 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PLA2G2EQ9NZK7 142 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TNFRSF18Q9Y5U5 241 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 STARD9Q9P2P6 4700 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 NOTCH4Q99466 2003 aa-0.21□□□□□ -2.44
SCARNA20.2-201ENST00000516052 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 IGSF10Q6WRI0 2623 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ABCA13Q86UQ4 5058 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TEP1Q99973 2627 aaKnown RBP-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ERVV-2B6SEH9 535 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PYCARD-AS1I3L0S3 204 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 GABBR2O75899 941 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 GDF11O95390 407 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SLURP2P0DP57 97 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KCNMA1Q12791 1236 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 FBLN7Q53RD9 439 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 PEAR1Q5VY43 1037 aaPredicted RBP-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 DMRTA1Q5VZB9 504 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HIST2H2BDQ6DRA6 164 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TMEM151AQ8N4L1 468 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP3-3Q9BYR6 98 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 KRTAP3-2Q9BYR7 98 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TMPRSS5Q9H3S3 457 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 ALG13Q9NP73 1137 aaKnown RBP-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 SSUH2Q9Y2M2 353 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 TESMINQ9Y4I5 508 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 HMCN2Q8NDA2 5059 aa-0.22□□□□□ -2.44
SCARNA20.2-201ENST00000516052 CELSR1Q9NYQ6 3014 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SETD2Q9BYW2 2564 aaPredicted RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TRAFD1O14545 582 aaPredicted RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 WFS1O76024 890 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 THBS1P07996 1170 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PRB4P10163 310 aaPredicted RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MT4P47944 62 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NOVP48745 357 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HNRNPA3P51991 378 aaKnown RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 INHBCP55103 352 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RASSF7Q02833 373 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GPR162Q16538 588 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CPSF6Q16630 551 aaKnown RBP eCLIP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LRCH2Q5VUJ6 765 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SPOCD1Q6ZMY3 1216 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GDF7Q7Z4P5 450 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZCCHC13Q8WW36 166 aaKnown RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FMNL2Q96PY5 1086 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KCNK12Q9HB15 430 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 METTL14Q9HCE5 456 aaKnown RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 VPS9D1Q9Y2B5 631 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DSPP15924 2871 aaKnown RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PCSK5Q92824 1860 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FRAS1Q86XX4 4008 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CREBBPQ92793 2442 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ASH1LQ9NR48 2969 aaKnown RBP-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LRP2P98164 4655 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SDK1Q7Z5N4 2213 aa-0.23□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FN1P02751 2386 aaKnown RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ITGB4P16144 1822 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 STAB2Q8WWQ8 2551 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF292O60281 2723 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 UBR5O95071 2799 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 AGRNO00468 2067 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 POTECB2RU33 542 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 K7ELQ4 463 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PAX4O43316 350 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RGS20O76081 388 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ITGB2P05107 769 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ITGB6P18564 788 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 POU3F3P20264 500 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HOXA10P31260 410 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 IRS1P35568 1242 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HNRNPKP61978 463 aaKnown RBP eCLIP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NFX1Q12986 1120 aaKnown RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FHL3Q13643 280 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL9A2Q14055 689 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRT71Q3SY84 523 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MCTP1Q6DN14 999 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LILRA6Q6PI73 481 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PP632Q6XCG6 107 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 Q7L0L9 218 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GLCCI1Q86VQ1 547 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CRELD1Q96HD1 420 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 MENTQ9BUN1 341 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF282Q9UDV7 671 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZBTB32Q9Y2Y4 487 aaPredicted RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 CELSR3Q9NYQ7 3312 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SONP18583 2426 aaKnown RBP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZFYVE26Q68DK2 2539 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 UNC79Q9P2D8 2635 aa-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NIPBLQ6KC79 2804 aaeCLIP-0.24□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SHANK1Q9Y566 2161 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL6A6A6NMZ7 2263 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 EP300Q09472 2414 aaPredicted RBP-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 HIVEP3Q5T1R4 2406 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ABCA2Q9BZC7 2435 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PIEZO1Q92508 2521 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF462Q96JM2 2506 aa-0.25□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LRP1Q07954 4544 aaKnown RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms