RNA–Protein interactions for RNA: ENST00000512309.1

COPB2-210, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-210ENST00000512309 EVI5O60447 810 aa11.48□□□□□ -0.57
COPB2-210ENST00000512309 NYAP1Q6ZVC0 841 aa11.46□□□□□ -0.57
COPB2-210ENST00000512309 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
COPB2-210ENST00000512309 COL9A1P20849 921 aa11.45□□□□□ -0.58
COPB2-210ENST00000512309 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
COPB2-210ENST00000512309 ZFRQ96KR1 1074 aaKnown RBP11.44□□□□□ -0.58
COPB2-210ENST00000512309 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
COPB2-210ENST00000512309 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
COPB2-210ENST00000512309 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
COPB2-210ENST00000512309 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
COPB2-210ENST00000512309 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
COPB2-210ENST00000512309 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
COPB2-210ENST00000512309 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
COPB2-210ENST00000512309 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
COPB2-210ENST00000512309 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
COPB2-210ENST00000512309 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
COPB2-210ENST00000512309 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
COPB2-210ENST00000512309 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
COPB2-210ENST00000512309 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
COPB2-210ENST00000512309 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
COPB2-210ENST00000512309 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
COPB2-210ENST00000512309 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
COPB2-210ENST00000512309 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
COPB2-210ENST00000512309 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
COPB2-210ENST00000512309 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
COPB2-210ENST00000512309 PDE4AP27815 886 aa11.29□□□□□ -0.6
COPB2-210ENST00000512309 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
COPB2-210ENST00000512309 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
COPB2-210ENST00000512309 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
COPB2-210ENST00000512309 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
COPB2-210ENST00000512309 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
COPB2-210ENST00000512309 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
COPB2-210ENST00000512309 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
COPB2-210ENST00000512309 PHF14O94880 888 aa11.24□□□□□ -0.61
COPB2-210ENST00000512309 TJAP1Q5JTD0 557 aa11.24□□□□□ -0.61
COPB2-210ENST00000512309 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
COPB2-210ENST00000512309 EMILIN3Q9NT22 766 aa11.24□□□□□ -0.61
COPB2-210ENST00000512309 V9GY48 417 aaPredicted RBP11.24□□□□□ -0.61
COPB2-210ENST00000512309 PPP1R18Q6NYC8 613 aa11.23□□□□□ -0.61
COPB2-210ENST00000512309 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
COPB2-210ENST00000512309 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
COPB2-210ENST00000512309 C6orf132Q5T0Z8 1188 aa11.22□□□□□ -0.61
COPB2-210ENST00000512309 PPP4CP60510 307 aa11.2□□□□□ -0.62
COPB2-210ENST00000512309 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
COPB2-210ENST00000512309 MTRQ99707 1265 aa11.17□□□□□ -0.62
COPB2-210ENST00000512309 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
COPB2-210ENST00000512309 BCANQ96GW7 911 aa11.15□□□□□ -0.62
COPB2-210ENST00000512309 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
COPB2-210ENST00000512309 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
COPB2-210ENST00000512309 MFSD10Q14728 455 aa11.14□□□□□ -0.63
COPB2-210ENST00000512309 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
COPB2-210ENST00000512309 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
COPB2-210ENST00000512309 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
COPB2-210ENST00000512309 EPAS1Q99814 870 aa11.13□□□□□ -0.63
COPB2-210ENST00000512309 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
COPB2-210ENST00000512309 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
COPB2-210ENST00000512309 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
COPB2-210ENST00000512309 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
COPB2-210ENST00000512309 SMAPO00193 183 aa11.07□□□□□ -0.64
COPB2-210ENST00000512309 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
COPB2-210ENST00000512309 POTECB2RU33 542 aa11.06□□□□□ -0.64
COPB2-210ENST00000512309 DDX12PQ92771 950 aa11.03□□□□□ -0.64
COPB2-210ENST00000512309 TSR1Q2NL82 804 aaKnown RBP11.02□□□□□ -0.65
COPB2-210ENST00000512309 TRIM67Q6ZTA4 783 aa11.02□□□□□ -0.65
COPB2-210ENST00000512309 DPYSL4O14531 572 aa11.01□□□□□ -0.65
COPB2-210ENST00000512309 MYT1Q01538 1121 aa11.01□□□□□ -0.65
COPB2-210ENST00000512309 RNF40O75150 1001 aa11□□□□□ -0.65
COPB2-210ENST00000512309 APLP1P51693 650 aa11□□□□□ -0.65
COPB2-210ENST00000512309 GGCXP38435 758 aa10.99□□□□□ -0.65
COPB2-210ENST00000512309 PKDCCQ504Y2 493 aa10.99□□□□□ -0.65
COPB2-210ENST00000512309 C3orf80F5H4A9 247 aa10.98□□□□□ -0.65
COPB2-210ENST00000512309 MAP3K7O43318 606 aa10.97□□□□□ -0.65
COPB2-210ENST00000512309 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
COPB2-210ENST00000512309 FAM198AQ9UFP1 575 aa10.97□□□□□ -0.65
COPB2-210ENST00000512309 COPS2P61201 443 aa10.96□□□□□ -0.65
COPB2-210ENST00000512309 NBR1Q14596 966 aa10.96□□□□□ -0.65
COPB2-210ENST00000512309 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
COPB2-210ENST00000512309 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
COPB2-210ENST00000512309 DGAT1O75907 488 aa10.93□□□□□ -0.66
COPB2-210ENST00000512309 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
COPB2-210ENST00000512309 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
COPB2-210ENST00000512309 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
COPB2-210ENST00000512309 PRSS12P56730 875 aa10.92□□□□□ -0.66
COPB2-210ENST00000512309 TATDN2Q93075 761 aa10.92□□□□□ -0.66
COPB2-210ENST00000512309 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
COPB2-210ENST00000512309 SLC19A1P41440 591 aa10.91□□□□□ -0.66
COPB2-210ENST00000512309 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
COPB2-210ENST00000512309 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
COPB2-210ENST00000512309 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
COPB2-210ENST00000512309 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
COPB2-210ENST00000512309 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
COPB2-210ENST00000512309 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
COPB2-210ENST00000512309 ZPR1O75312 459 aa10.86□□□□□ -0.67
COPB2-210ENST00000512309 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
COPB2-210ENST00000512309 SPRYD7Q5W111 196 aa10.86□□□□□ -0.67
COPB2-210ENST00000512309 PRR20EP86478 221 aa10.85□□□□□ -0.67
COPB2-210ENST00000512309 PRR20CP86479 221 aa10.85□□□□□ -0.67
COPB2-210ENST00000512309 PRR20DP86480 221 aa10.85□□□□□ -0.67
COPB2-210ENST00000512309 PRR20BP86481 221 aa10.85□□□□□ -0.67
COPB2-210ENST00000512309 PRR20AP86496 221 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms