RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 GFRA3O60609 400 aa9.61□□□□□ -0.87
OTUD4-207ENST00000509517 PDE4AP27815 886 aa9.61□□□□□ -0.87
OTUD4-207ENST00000509517 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
OTUD4-207ENST00000509517 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
OTUD4-207ENST00000509517 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
OTUD4-207ENST00000509517 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
OTUD4-207ENST00000509517 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
OTUD4-207ENST00000509517 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
OTUD4-207ENST00000509517 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
OTUD4-207ENST00000509517 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
OTUD4-207ENST00000509517 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
OTUD4-207ENST00000509517 HPS5Q9UPZ3 1129 aa9.53□□□□□ -0.88
OTUD4-207ENST00000509517 C6orf132Q5T0Z8 1188 aa9.52□□□□□ -0.89
OTUD4-207ENST00000509517 PHF14O94880 888 aa9.51□□□□□ -0.89
OTUD4-207ENST00000509517 MFSD10Q14728 455 aa9.51□□□□□ -0.89
OTUD4-207ENST00000509517 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
OTUD4-207ENST00000509517 TSR3Q9UJK0 312 aaKnown RBP9.51□□□□□ -0.89
OTUD4-207ENST00000509517 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
OTUD4-207ENST00000509517 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.5□□□□□ -0.89
OTUD4-207ENST00000509517 TRIM6-TRIM34B2RNG4 842 aa9.49□□□□□ -0.89
OTUD4-207ENST00000509517 GTPBP6O43824 516 aaPredicted RBP9.49□□□□□ -0.89
OTUD4-207ENST00000509517 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
OTUD4-207ENST00000509517 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
OTUD4-207ENST00000509517 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
OTUD4-207ENST00000509517 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
OTUD4-207ENST00000509517 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
OTUD4-207ENST00000509517 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
OTUD4-207ENST00000509517 LRCH3Q96II8 777 aa9.46□□□□□ -0.9
OTUD4-207ENST00000509517 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
OTUD4-207ENST00000509517 ZNF787Q6DD87 383 aa9.44□□□□□ -0.9
OTUD4-207ENST00000509517 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
OTUD4-207ENST00000509517 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
OTUD4-207ENST00000509517 ZNF516Q92618 1163 aa9.43□□□□□ -0.9
OTUD4-207ENST00000509517 ZNF775Q96BV0 537 aaPredicted RBP9.43□□□□□ -0.9
OTUD4-207ENST00000509517 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
OTUD4-207ENST00000509517 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
OTUD4-207ENST00000509517 SMAPO00193 183 aa9.41□□□□□ -0.9
OTUD4-207ENST00000509517 PPP4CP60510 307 aa9.4□□□□□ -0.9
OTUD4-207ENST00000509517 EPAS1Q99814 870 aa9.4□□□□□ -0.9
OTUD4-207ENST00000509517 DPYSL4O14531 572 aa9.39□□□□□ -0.91
OTUD4-207ENST00000509517 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
OTUD4-207ENST00000509517 DDX12PQ92771 950 aa9.39□□□□□ -0.91
OTUD4-207ENST00000509517 MTRQ99707 1265 aa9.39□□□□□ -0.91
OTUD4-207ENST00000509517 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
OTUD4-207ENST00000509517 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
OTUD4-207ENST00000509517 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
OTUD4-207ENST00000509517 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
OTUD4-207ENST00000509517 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
OTUD4-207ENST00000509517 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
OTUD4-207ENST00000509517 PDZRN3Q9UPQ7 1066 aa9.35□□□□□ -0.91
OTUD4-207ENST00000509517 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
OTUD4-207ENST00000509517 PACS2Q86VP3 889 aa9.34□□□□□ -0.91
OTUD4-207ENST00000509517 IL21Q9HBE4 155 aa9.34□□□□□ -0.91
OTUD4-207ENST00000509517 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
OTUD4-207ENST00000509517 PRIM1P49642 420 aaKnown RBP9.32□□□□□ -0.92
OTUD4-207ENST00000509517 POTECB2RU33 542 aa9.31□□□□□ -0.92
OTUD4-207ENST00000509517 APLP1P51693 650 aa9.31□□□□□ -0.92
OTUD4-207ENST00000509517 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
OTUD4-207ENST00000509517 TRIM67Q6ZTA4 783 aa9.29□□□□□ -0.92
OTUD4-207ENST00000509517 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
OTUD4-207ENST00000509517 MAP3K7O43318 606 aa9.28□□□□□ -0.92
OTUD4-207ENST00000509517 NBR1Q14596 966 aa9.28□□□□□ -0.92
OTUD4-207ENST00000509517 EMID1Q96A84 441 aaPredicted RBP9.27□□□□□ -0.93
OTUD4-207ENST00000509517 TATDN2Q93075 761 aa9.26□□□□□ -0.93
OTUD4-207ENST00000509517 PRSS12P56730 875 aa9.25□□□□□ -0.93
OTUD4-207ENST00000509517 COPS2P61201 443 aa9.24□□□□□ -0.93
OTUD4-207ENST00000509517 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
OTUD4-207ENST00000509517 RNF40O75150 1001 aa9.22□□□□□ -0.93
OTUD4-207ENST00000509517 MYT1Q01538 1121 aa9.22□□□□□ -0.93
OTUD4-207ENST00000509517 NUDT18Q6ZVK8 323 aa9.2□□□□□ -0.94
OTUD4-207ENST00000509517 CDHR5Q9HBB8 845 aa9.18□□□□□ -0.94
OTUD4-207ENST00000509517 PDIA6Q15084 440 aa9.17□□□□□ -0.94
OTUD4-207ENST00000509517 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
OTUD4-207ENST00000509517 SLC19A1P41440 591 aa9.16□□□□□ -0.94
OTUD4-207ENST00000509517 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
OTUD4-207ENST00000509517 NBPF26B4DH59 902 aa9.15□□□□□ -0.94
OTUD4-207ENST00000509517 ZPR1O75312 459 aa9.15□□□□□ -0.94
OTUD4-207ENST00000509517 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
OTUD4-207ENST00000509517 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
OTUD4-207ENST00000509517 PPEF1O14829 653 aaPredicted RBP9.14□□□□□ -0.95
OTUD4-207ENST00000509517 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
OTUD4-207ENST00000509517 GGCXP38435 758 aa9.13□□□□□ -0.95
OTUD4-207ENST00000509517 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
OTUD4-207ENST00000509517 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
OTUD4-207ENST00000509517 DGAT1O75907 488 aa9.11□□□□□ -0.95
OTUD4-207ENST00000509517 LIAT1Q6ZQX7 453 aa9.11□□□□□ -0.95
OTUD4-207ENST00000509517 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
OTUD4-207ENST00000509517 OSBPP22059 807 aa9.1□□□□□ -0.95
OTUD4-207ENST00000509517 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
OTUD4-207ENST00000509517 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
OTUD4-207ENST00000509517 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
OTUD4-207ENST00000509517 TLL1O43897 1013 aa9.09□□□□□ -0.95
OTUD4-207ENST00000509517 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
OTUD4-207ENST00000509517 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
OTUD4-207ENST00000509517 TNFRSF10AO00220 468 aa9.08□□□□□ -0.96
OTUD4-207ENST00000509517 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
OTUD4-207ENST00000509517 NPDC1Q9NQX5 325 aaPredicted RBP9.08□□□□□ -0.96
OTUD4-207ENST00000509517 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
OTUD4-207ENST00000509517 GDF9O60383 454 aa9.07□□□□□ -0.96
OTUD4-207ENST00000509517 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms