RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
DHFR-204ENST00000508282 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
DHFR-204ENST00000508282 PTPREP23469 700 aa12.86□□□□□ -0.35
DHFR-204ENST00000508282 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
DHFR-204ENST00000508282 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
DHFR-204ENST00000508282 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
DHFR-204ENST00000508282 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
DHFR-204ENST00000508282 MAP3K7O43318 606 aa12.82□□□□□ -0.36
DHFR-204ENST00000508282 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
DHFR-204ENST00000508282 COL9A1P20849 921 aa12.81□□□□□ -0.36
DHFR-204ENST00000508282 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
DHFR-204ENST00000508282 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
DHFR-204ENST00000508282 CDHR5Q9HBB8 845 aa12.77□□□□□ -0.37
DHFR-204ENST00000508282 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
DHFR-204ENST00000508282 SMYD5Q6GMV2 418 aa12.75□□□□□ -0.37
DHFR-204ENST00000508282 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
DHFR-204ENST00000508282 TK2O00142 265 aa12.74□□□□□ -0.37
DHFR-204ENST00000508282 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
DHFR-204ENST00000508282 SLC4A5Q9BY07 1137 aa12.74□□□□□ -0.37
DHFR-204ENST00000508282 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
DHFR-204ENST00000508282 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
DHFR-204ENST00000508282 PROX2Q3B8N5 592 aa12.71□□□□□ -0.37
DHFR-204ENST00000508282 NPDC1Q9NQX5 325 aaPredicted RBP12.71□□□□□ -0.37
DHFR-204ENST00000508282 HRO43593 1189 aa12.69□□□□□ -0.38
DHFR-204ENST00000508282 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
DHFR-204ENST00000508282 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
DHFR-204ENST00000508282 PTGDRQ13258 359 aa12.66□□□□□ -0.38
DHFR-204ENST00000508282 PRSS12P56730 875 aa12.65□□□□□ -0.38
DHFR-204ENST00000508282 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
DHFR-204ENST00000508282 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
DHFR-204ENST00000508282 BHMG1C9JSJ3 638 aaPredicted RBP12.64□□□□□ -0.39
DHFR-204ENST00000508282 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
DHFR-204ENST00000508282 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
DHFR-204ENST00000508282 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
DHFR-204ENST00000508282 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
DHFR-204ENST00000508282 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
DHFR-204ENST00000508282 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
DHFR-204ENST00000508282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.397e-18■■■■□ 26.7
DHFR-204ENST00000508282 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
DHFR-204ENST00000508282 GPR37O15354 613 aa12.6□□□□□ -0.39
DHFR-204ENST00000508282 FCHSD2O94868 740 aa12.6□□□□□ -0.39
DHFR-204ENST00000508282 PADI6Q6TGC4 694 aa12.59□□□□□ -0.39
DHFR-204ENST00000508282 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
DHFR-204ENST00000508282 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
DHFR-204ENST00000508282 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
DHFR-204ENST00000508282 MYT1LQ9UL68 1186 aa12.59□□□□□ -0.39
DHFR-204ENST00000508282 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
DHFR-204ENST00000508282 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
DHFR-204ENST00000508282 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
DHFR-204ENST00000508282 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
DHFR-204ENST00000508282 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
DHFR-204ENST00000508282 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
DHFR-204ENST00000508282 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
DHFR-204ENST00000508282 BCANQ96GW7 911 aa12.54□□□□□ -0.4
DHFR-204ENST00000508282 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
DHFR-204ENST00000508282 HIC1Q14526 733 aa12.53□□□□□ -0.4
DHFR-204ENST00000508282 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
DHFR-204ENST00000508282 SMAPO00193 183 aa12.51□□□□□ -0.41
DHFR-204ENST00000508282 GNPATO15228 680 aa12.51□□□□□ -0.41
DHFR-204ENST00000508282 TATDN2Q93075 761 aa12.51□□□□□ -0.41
DHFR-204ENST00000508282 FECHP22830 423 aa12.5□□□□□ -0.41
DHFR-204ENST00000508282 LAPTM4BQ86VI4 370 aa12.5□□□□□ -0.41
DHFR-204ENST00000508282 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
DHFR-204ENST00000508282 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
DHFR-204ENST00000508282 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
DHFR-204ENST00000508282 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
DHFR-204ENST00000508282 GOLGA8CPA6NN73 597 aa12.46□□□□□ -0.41
DHFR-204ENST00000508282 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
DHFR-204ENST00000508282 KCTD12Q96CX2 325 aaKnown RBP12.46□□□□□ -0.41
DHFR-204ENST00000508282 ZFRQ96KR1 1074 aaKnown RBP12.46□□□□□ -0.41
DHFR-204ENST00000508282 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
DHFR-204ENST00000508282 EYA1Q99502 592 aa12.45□□□□□ -0.42
DHFR-204ENST00000508282 WNT2BQ93097 391 aa12.44□□□□□ -0.42
DHFR-204ENST00000508282 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
DHFR-204ENST00000508282 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
DHFR-204ENST00000508282 THSD4Q6ZMP0 1018 aa12.4□□□□□ -0.42
DHFR-204ENST00000508282 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
DHFR-204ENST00000508282 SOWAHBA6NEL2 793 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 ZMYND10O75800 440 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 OATP04181 439 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 BCAMP50895 628 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 MAP2K5Q13163 448 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
DHFR-204ENST00000508282 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
DHFR-204ENST00000508282 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
DHFR-204ENST00000508282 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
DHFR-204ENST00000508282 RCCD1A6NED2 376 aa12.34□□□□□ -0.43
DHFR-204ENST00000508282 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
DHFR-204ENST00000508282 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
DHFR-204ENST00000508282 IRF6O14896 467 aa12.33□□□□□ -0.44
DHFR-204ENST00000508282 PTPN5P54829 565 aa12.33□□□□□ -0.44
DHFR-204ENST00000508282 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
DHFR-204ENST00000508282 MINK1Q8N4C8 1332 aaPredicted RBP12.33□□□□□ -0.44
DHFR-204ENST00000508282 DNAJB2P25686 324 aa12.32□□□□□ -0.44
DHFR-204ENST00000508282 SWT1Q5T5J6 900 aaKnown RBP12.32□□□□□ -0.44
DHFR-204ENST00000508282 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
DHFR-204ENST00000508282 TMEM134Q9H6X4 195 aa12.31□□□□□ -0.44
DHFR-204ENST00000508282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
DHFR-204ENST00000508282 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
DHFR-204ENST00000508282 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms