RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 OSBPP22059 807 aa7.09□□□□□ -1.27
HMGB1P21-201ENST00000502313 MAP3K7O43318 606 aa7.08□□□□□ -1.28
HMGB1P21-201ENST00000502313 COLQQ9Y215 455 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P21-201ENST00000502313 AMHR2Q16671 573 aa7.07□□□□□ -1.28
HMGB1P21-201ENST00000502313 TMEM92Q6UXU6 159 aa7.07□□□□□ -1.28
HMGB1P21-201ENST00000502313 EPAS1Q99814 870 aa7.07□□□□□ -1.28
HMGB1P21-201ENST00000502313 ATP1B4Q9UN42 357 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P21-201ENST00000502313 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.06□□□□□ -1.28
HMGB1P21-201ENST00000502313 PARP9Q8IXQ6 854 aa7.05□□□□□ -1.28
HMGB1P21-201ENST00000502313 PTCD2Q8WV60 388 aaKnown RBP7.05□□□□□ -1.28
HMGB1P21-201ENST00000502313 FAM117AQ9C073 453 aa7.05□□□□□ -1.28
HMGB1P21-201ENST00000502313 PHF14O94880 888 aa7.04□□□□□ -1.28
HMGB1P21-201ENST00000502313 PTGDRQ13258 359 aa7.04□□□□□ -1.28
HMGB1P21-201ENST00000502313 RBM33Q96EV2 1170 aaKnown RBP7.04□□□□□ -1.28
HMGB1P21-201ENST00000502313 SLC34A2O95436 690 aa7.03□□□□□ -1.28
HMGB1P21-201ENST00000502313 EN1Q05925 392 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P21-201ENST00000502313 SHROOM4Q9ULL8 1493 aa7.03□□□□□ -1.28
HMGB1P21-201ENST00000502313 CLCN1P35523 988 aa7.02□□□□□ -1.29
HMGB1P21-201ENST00000502313 TYW1BQ6NUM6 668 aa7.02□□□□□ -1.29
HMGB1P21-201ENST00000502313 FBXW7Q969H0 707 aa7.02□□□□□ -1.29
HMGB1P21-201ENST00000502313 PCMTD1Q96MG8 357 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P21-201ENST00000502313 IGSF3O75054 1194 aa7.01□□□□□ -1.29
HMGB1P21-201ENST00000502313 FECHP22830 423 aa7.01□□□□□ -1.29
HMGB1P21-201ENST00000502313 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P21-201ENST00000502313 GIGYF2Q6Y7W6 1299 aaKnown RBP7.01□□□□□ -1.29
HMGB1P21-201ENST00000502313 SLAIN1Q8ND83 568 aa7.01□□□□□ -1.29
HMGB1P21-201ENST00000502313 KCTD17Q8N5Z5 321 aa7□□□□□ -1.29
HMGB1P21-201ENST00000502313 RIMBP2O15034 1052 aa6.99□□□□□ -1.29
HMGB1P21-201ENST00000502313 FLIIQ13045 1269 aa6.99□□□□□ -1.29
HMGB1P21-201ENST00000502313 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
HMGB1P21-201ENST00000502313 ANO8Q9HCE9 1232 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P21-201ENST00000502313 PCDHGA4Q9Y5G9 962 aa6.99□□□□□ -1.29
HMGB1P21-201ENST00000502313 RAD21O60216 631 aa6.98□□□□□ -1.29
HMGB1P21-201ENST00000502313 CERKQ8TCT0 537 aa6.98□□□□□ -1.29
HMGB1P21-201ENST00000502313 JPH4Q96JJ6 628 aa6.98□□□□□ -1.29
HMGB1P21-201ENST00000502313 GPCPD1Q9NPB8 672 aa6.98□□□□□ -1.29
HMGB1P21-201ENST00000502313 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P21-201ENST00000502313 CCDC82Q8N4S0 544 aa6.97□□□□□ -1.29
HMGB1P21-201ENST00000502313 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 OATP04181 439 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 PRIM1P49642 420 aaKnown RBP6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 DOK7Q18PE1 504 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 ZNF454Q8N9F8 522 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 GOPCQ9HD26 462 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 PCDHGA10Q9Y5H3 936 aa6.96□□□□□ -1.3
HMGB1P21-201ENST00000502313 TSR1Q2NL82 804 aaKnown RBP6.95□□□□□ -1.3
HMGB1P21-201ENST00000502313 RGS22Q8NE09 1264 aa6.94□□□□□ -1.3
HMGB1P21-201ENST00000502313 MS4A1P11836 297 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 MAMSTRQ6ZN01 415 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 ZNF710Q8N1W2 664 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 ZDHHC16Q969W1 377 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 MTMR7Q9Y216 660 aa6.93□□□□□ -1.3
HMGB1P21-201ENST00000502313 MYO15BQ96JP2 1530 aa6.92□□□□□ -1.3
HMGB1P21-201ENST00000502313 SH3D19Q5HYK7 790 aa6.92□□□□□ -1.3
HMGB1P21-201ENST00000502313 PADI6Q6TGC4 694 aa6.92□□□□□ -1.3
HMGB1P21-201ENST00000502313 RBM46Q8TBY0 533 aaKnown RBP6.92□□□□□ -1.3
HMGB1P21-201ENST00000502313 TTBK1Q5TCY1 1321 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P21-201ENST00000502313 POTEMA6NI47 508 aa6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 SSTR3P32745 418 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 MYT1Q01538 1121 aa6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 ZNF428Q96B54 188 aa6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 RBM27Q9P2N5 1060 aaKnown RBP6.91□□□□□ -1.3
HMGB1P21-201ENST00000502313 NUDT7P0C024 238 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 FOSBP53539 338 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 DIXDC1Q155Q3 683 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 POTEGQ6S5H5 508 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 METTL3Q86U44 580 aaKnown RBP6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
HMGB1P21-201ENST00000502313 TRAK2O60296 914 aa6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 PPP4R3BQ5MIZ7 849 aa6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 FOXD4L5Q5VV16 416 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 FAM163AQ96GL9 167 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 KCNH8Q96L42 1107 aa6.89□□□□□ -1.31
HMGB1P21-201ENST00000502313 PSDA5PKW4 1024 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P21-201ENST00000502313 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
HMGB1P21-201ENST00000502313 ZSWIM6Q9HCJ5 1215 aa6.88□□□□□ -1.31
HMGB1P21-201ENST00000502313 NACADO15069 1562 aa6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 RBM25P49756 843 aaKnown RBP6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 FAM161AQ3B820 660 aa6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 FAM217BQ9NTX9 383 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 ADGRG1Q9Y653 693 aa6.87□□□□□ -1.31
HMGB1P21-201ENST00000502313 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
HMGB1P21-201ENST00000502313 PRSS12P56730 875 aa6.86□□□□□ -1.31
HMGB1P21-201ENST00000502313 ARSIQ5FYB1 569 aa6.86□□□□□ -1.31
HMGB1P21-201ENST00000502313 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
HMGB1P21-201ENST00000502313 POLR3EQ9NVU0 708 aa6.86□□□□□ -1.31
HMGB1P21-201ENST00000502313 ZCCHC6Q5VYS8 1495 aaKnown RBP6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 NBPF26B4DH59 902 aa6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 EIF5BO60841 1220 aaKnown RBP6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
HMGB1P21-201ENST00000502313 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms