RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
PBX1-211ENST00000498497 ANTXR1Q9H6X2 564 aa14.74□□□□□ -0.05
PBX1-211ENST00000498497 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
PBX1-211ENST00000498497 USP19O94966 1318 aa14.73□□□□□ -0.05
PBX1-211ENST00000498497 ATP2B3Q16720 1220 aa14.73□□□□□ -0.05
PBX1-211ENST00000498497 CCDC94Q9BW85 323 aaPredicted RBP14.73□□□□□ -0.05
PBX1-211ENST00000498497 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
PBX1-211ENST00000498497 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
PBX1-211ENST00000498497 PHLDB1Q86UU1 1377 aa14.71□□□□□ -0.05
PBX1-211ENST00000498497 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
PBX1-211ENST00000498497 ERICH4A6NGS2 130 aa14.69□□□□□ -0.06
PBX1-211ENST00000498497 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
PBX1-211ENST00000498497 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
PBX1-211ENST00000498497 NBPF8Q3BBV2 869 aa14.68□□□□□ -0.06
PBX1-211ENST00000498497 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
PBX1-211ENST00000498497 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
PBX1-211ENST00000498497 IRX3P78415 501 aaPredicted RBP14.68□□□□□ -0.06
PBX1-211ENST00000498497 RNF214Q8ND24 703 aa14.68□□□□□ -0.06
PBX1-211ENST00000498497 C17orf53Q8N3J3 647 aaPredicted RBP14.68□□□□□ -0.06
PBX1-211ENST00000498497 CUX2O14529 1486 aa14.67□□□□□ -0.06
PBX1-211ENST00000498497 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
PBX1-211ENST00000498497 IGHDP01880 384 aa14.66□□□□□ -0.06
PBX1-211ENST00000498497 UTP14CQ5TAP6 766 aaKnown RBP14.66□□□□□ -0.06
PBX1-211ENST00000498497 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
PBX1-211ENST00000498497 CHMP5Q9NZZ3 219 aa14.66□□□□□ -0.06
PBX1-211ENST00000498497 U2AF2P26368 475 aaKnown RBP eCLIP14.65□□□□□ -0.06
PBX1-211ENST00000498497 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
PBX1-211ENST00000498497 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
PBX1-211ENST00000498497 MLECQ14165 292 aa14.65□□□□□ -0.06
PBX1-211ENST00000498497 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
PBX1-211ENST00000498497 NGEFQ8N5V2 710 aa14.65□□□□□ -0.06
PBX1-211ENST00000498497 TRIM6-TRIM34B2RNG4 842 aa14.64□□□□□ -0.07
PBX1-211ENST00000498497 TRIM34Q9BYJ4 488 aa14.64□□□□□ -0.07
PBX1-211ENST00000498497 TMX1Q9H3N1 280 aa14.64□□□□□ -0.07
PBX1-211ENST00000498497 DDX49Q9Y6V7 483 aaKnown RBP14.64□□□□□ -0.07
PBX1-211ENST00000498497 DYNC1I1O14576 645 aa14.64□□□□□ -0.07
PBX1-211ENST00000498497 TNPO1Q92973 898 aaKnown RBP14.62□□□□□ -0.07
PBX1-211ENST00000498497 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
PBX1-211ENST00000498497 KIF20AO95235 890 aa14.61□□□□□ -0.07
PBX1-211ENST00000498497 LETM1O95202 739 aaPredicted RBP14.61□□□□□ -0.07
PBX1-211ENST00000498497 CAVIN1Q6NZI2 390 aaKnown RBP14.61□□□□□ -0.07
PBX1-211ENST00000498497 FOXD4L5Q5VV16 416 aaPredicted RBP14.6□□□□□ -0.07
PBX1-211ENST00000498497 FOXD4L4Q8WXT5 416 aaPredicted RBP14.6□□□□□ -0.07
PBX1-211ENST00000498497 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
PBX1-211ENST00000498497 BCAR3O75815 825 aa14.59□□□□□ -0.07
PBX1-211ENST00000498497 APPP05067 770 aa14.59□□□□□ -0.07
PBX1-211ENST00000498497 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
PBX1-211ENST00000498497 HSP90AB1P08238 724 aaKnown RBP14.59□□□□□ -0.07
PBX1-211ENST00000498497 SASS6Q6UVJ0 657 aa14.59□□□□□ -0.07
PBX1-211ENST00000498497 MTERF4Q7Z6M4 381 aaKnown RBP14.59□□□□□ -0.07
PBX1-211ENST00000498497 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
PBX1-211ENST00000498497 PLCB2Q00722 1185 aa14.58□□□□□ -0.08
PBX1-211ENST00000498497 ZNF710Q8N1W2 664 aa14.58□□□□□ -0.08
PBX1-211ENST00000498497 GTPBP4Q9BZE4 634 aaKnown RBP14.58□□□□□ -0.08
PBX1-211ENST00000498497 EP400NLQ6ZTU2 488 aa14.58□□□□□ -0.08
PBX1-211ENST00000498497 CNPY4Q8N129 248 aa14.58□□□□□ -0.08
PBX1-211ENST00000498497 BRD2P25440 801 aaKnown RBP14.57□□□□□ -0.08
PBX1-211ENST00000498497 CHAMP1Q96JM3 812 aa14.57□□□□□ -0.08
PBX1-211ENST00000498497 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
PBX1-211ENST00000498497 NCOA1Q15788 1441 aa14.57□□□□□ -0.08
PBX1-211ENST00000498497 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
PBX1-211ENST00000498497 PANK1Q8TE04 598 aa14.56□□□□□ -0.08
PBX1-211ENST00000498497 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.56□□□□□ -0.08
PBX1-211ENST00000498497 RBM27Q9P2N5 1060 aaKnown RBP14.56□□□□□ -0.08
PBX1-211ENST00000498497 MAP3K1Q13233 1512 aa14.55□□□□□ -0.08
PBX1-211ENST00000498497 WWC1Q8IX03 1113 aa14.55□□□□□ -0.08
PBX1-211ENST00000498497 KCNG1Q9UIX4 513 aa14.55□□□□□ -0.08
PBX1-211ENST00000498497 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
PBX1-211ENST00000498497 PDCL2Q8N4E4 241 aa14.54□□□□□ -0.08
PBX1-211ENST00000498497 CLUAP1Q96AJ1 413 aa14.54□□□□□ -0.08
PBX1-211ENST00000498497 TEX2Q8IWB9 1127 aa14.54□□□□□ -0.08
PBX1-211ENST00000498497 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
PBX1-211ENST00000498497 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 SSFA2P28290 1259 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
PBX1-211ENST00000498497 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
PBX1-211ENST00000498497 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
PBX1-211ENST00000498497 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.53□□□□□ -0.08
PBX1-211ENST00000498497 GBP4Q96PP9 640 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 RBSNQ9H1K0 784 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 CCDC18Q5T9S5 1454 aa14.53□□□□□ -0.08
PBX1-211ENST00000498497 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.08
PBX1-211ENST00000498497 KDM2AQ9Y2K7 1162 aa14.52□□□□□ -0.08
PBX1-211ENST00000498497 MCTP1Q6DN14 999 aa14.52□□□□□ -0.08
PBX1-211ENST00000498497 PATL2C9JE40 543 aaKnown RBP14.52□□□□□ -0.09
PBX1-211ENST00000498497 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
PBX1-211ENST00000498497 DHX29Q7Z478 1369 aaKnown RBP14.51□□□□□ -0.09
PBX1-211ENST00000498497 NOL7Q9UMY1 257 aaKnown RBP14.51□□□□□ -0.09
PBX1-211ENST00000498497 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
PBX1-211ENST00000498497 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
PBX1-211ENST00000498497 ZKSCAN5Q9Y2L8 839 aa14.5□□□□□ -0.09
PBX1-211ENST00000498497 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
PBX1-211ENST00000498497 PPP1R9BQ96SB3 815 aa14.5□□□□□ -0.09
PBX1-211ENST00000498497 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
PBX1-211ENST00000498497 ZNF526Q8TF50 670 aaPredicted RBP14.48□□□□□ -0.09
PBX1-211ENST00000498497 BCL2L12Q9HB09 334 aa14.48□□□□□ -0.09
PBX1-211ENST00000498497 TNNT1P13805 278 aa14.48□□□□□ -0.09
PBX1-211ENST00000498497 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms