RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 PHF14O94880 888 aa11.26□□□□□ -0.61
PAXBP1-209ENST00000497873 CLCN1P35523 988 aa11.26□□□□□ -0.61
PAXBP1-209ENST00000497873 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
PAXBP1-209ENST00000497873 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
PAXBP1-209ENST00000497873 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
PAXBP1-209ENST00000497873 EPAS1Q99814 870 aa11.25□□□□□ -0.61
PAXBP1-209ENST00000497873 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
PAXBP1-209ENST00000497873 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
PAXBP1-209ENST00000497873 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
PAXBP1-209ENST00000497873 SLC34A2O95436 690 aa11.24□□□□□ -0.61
PAXBP1-209ENST00000497873 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
PAXBP1-209ENST00000497873 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
PAXBP1-209ENST00000497873 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
PAXBP1-209ENST00000497873 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
PAXBP1-209ENST00000497873 GABBR2O75899 941 aa11.23□□□□□ -0.61
PAXBP1-209ENST00000497873 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
PAXBP1-209ENST00000497873 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
PAXBP1-209ENST00000497873 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
PAXBP1-209ENST00000497873 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
PAXBP1-209ENST00000497873 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
PAXBP1-209ENST00000497873 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
PAXBP1-209ENST00000497873 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
PAXBP1-209ENST00000497873 A6NJR5 290 aa11.19□□□□□ -0.62
PAXBP1-209ENST00000497873 SKIV2LQ15477 1246 aaKnown RBP11.19□□□□□ -0.62
PAXBP1-209ENST00000497873 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
PAXBP1-209ENST00000497873 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
PAXBP1-209ENST00000497873 MCM6Q14566 821 aa11.18□□□□□ -0.62
PAXBP1-209ENST00000497873 TRAK2O60296 914 aa11.18□□□□□ -0.62
PAXBP1-209ENST00000497873 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
PAXBP1-209ENST00000497873 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
PAXBP1-209ENST00000497873 PCDHGA4Q9Y5G9 962 aa11.16□□□□□ -0.62
PAXBP1-209ENST00000497873 C7P10643 843 aa11.16□□□□□ -0.62
PAXBP1-209ENST00000497873 METTL3Q86U44 580 aaKnown RBP11.15□□□□□ -0.62
PAXBP1-209ENST00000497873 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
PAXBP1-209ENST00000497873 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
PAXBP1-209ENST00000497873 PADI6Q6TGC4 694 aa11.14□□□□□ -0.63
PAXBP1-209ENST00000497873 OATP04181 439 aa11.13□□□□□ -0.63
PAXBP1-209ENST00000497873 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
PAXBP1-209ENST00000497873 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
PAXBP1-209ENST00000497873 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
PAXBP1-209ENST00000497873 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
PAXBP1-209ENST00000497873 HRCP23327 699 aa11.1□□□□□ -0.63
PAXBP1-209ENST00000497873 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
PAXBP1-209ENST00000497873 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
PAXBP1-209ENST00000497873 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
PAXBP1-209ENST00000497873 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
PAXBP1-209ENST00000497873 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
PAXBP1-209ENST00000497873 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
PAXBP1-209ENST00000497873 FOSBP53539 338 aa11.08□□□□□ -0.64
PAXBP1-209ENST00000497873 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
PAXBP1-209ENST00000497873 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
PAXBP1-209ENST00000497873 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
PAXBP1-209ENST00000497873 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
PAXBP1-209ENST00000497873 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
PAXBP1-209ENST00000497873 RAD21O60216 631 aa11.05□□□□□ -0.64
PAXBP1-209ENST00000497873 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
PAXBP1-209ENST00000497873 CLK2P49760 499 aaKnown RBP11.05□□□□□ -0.64
PAXBP1-209ENST00000497873 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
PAXBP1-209ENST00000497873 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
PAXBP1-209ENST00000497873 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
PAXBP1-209ENST00000497873 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.64
PAXBP1-209ENST00000497873 POTEIP0CG38 1075 aa11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 NUDT7P0C024 238 aa11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 PRSS12P56730 875 aa11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■□□□ 14.4
PAXBP1-209ENST00000497873 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
PAXBP1-209ENST00000497873 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
PAXBP1-209ENST00000497873 RFC5P40937 340 aa11□□□□□ -0.65
PAXBP1-209ENST00000497873 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
PAXBP1-209ENST00000497873 CDCA7LQ96GN5 454 aa11□□□□□ -0.65
PAXBP1-209ENST00000497873 COG6Q9Y2V7 657 aa11□□□□□ -0.65
PAXBP1-209ENST00000497873 LIMD1Q9UGP4 676 aa10.99□□□□□ -0.65
PAXBP1-209ENST00000497873 DIXDC1Q155Q3 683 aa10.97□□□□□ -0.65
PAXBP1-209ENST00000497873 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
PAXBP1-209ENST00000497873 BANK1Q8NDB2 785 aa10.96□□□□□ -0.65
PAXBP1-209ENST00000497873 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.66
PAXBP1-209ENST00000497873 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.66
PAXBP1-209ENST00000497873 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.66
PAXBP1-209ENST00000497873 CCDC97Q96F63 343 aaPredicted RBP10.95□□□□□ -0.66
PAXBP1-209ENST00000497873 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
PAXBP1-209ENST00000497873 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
PAXBP1-209ENST00000497873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
PAXBP1-209ENST00000497873 TMEM259Q4ZIN3 620 aa10.93□□□□□ -0.66
PAXBP1-209ENST00000497873 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
PAXBP1-209ENST00000497873 CSPP1Q1MSJ5 1256 aa10.92□□□□□ -0.66
PAXBP1-209ENST00000497873 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
PAXBP1-209ENST00000497873 COL9A1P20849 921 aa10.92□□□□□ -0.66
PAXBP1-209ENST00000497873 EYA1Q99502 592 aa10.92□□□□□ -0.66
PAXBP1-209ENST00000497873 CD46P15529 392 aa10.91□□□□□ -0.66
PAXBP1-209ENST00000497873 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
PAXBP1-209ENST00000497873 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
PAXBP1-209ENST00000497873 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
PAXBP1-209ENST00000497873 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
PAXBP1-209ENST00000497873 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
PAXBP1-209ENST00000497873 GDPD2Q9HCC8 539 aa10.89□□□□□ -0.67
PAXBP1-209ENST00000497873 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
PAXBP1-209ENST00000497873 MTMR14Q8NCE2 650 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms