RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 NBPF11Q86T75 865 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 RINLQ6ZS11 566 aa6.58□□□□□ -1.36
CUL3-212ENST00000497715 EXOC8Q8IYI6 725 aa6.58□□□□□ -1.36
CUL3-212ENST00000497715 STK24Q9Y6E0 443 aa6.58□□□□□ -1.36
CUL3-212ENST00000497715 TTC36A6NLP5 189 aa6.58□□□□□ -1.36
CUL3-212ENST00000497715 CT47B1P0C2W7 299 aaPredicted RBP6.57□□□□□ -1.36
CUL3-212ENST00000497715 RALBP1Q15311 655 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 RNF217Q8TC41 542 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 EVI5LQ96CN4 794 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 CADPSQ9ULU8 1353 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 ARID4AP29374 1257 aaPredicted RBP6.57□□□□□ -1.36
CUL3-212ENST00000497715 GSE1Q14687 1217 aa6.57□□□□□ -1.36
CUL3-212ENST00000497715 PNNQ9H307 717 aaKnown RBP6.57□□□□□ -1.36
CUL3-212ENST00000497715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.56□□□□□ -1.36
CUL3-212ENST00000497715 BRPF1P55201 1214 aaPredicted RBP6.56□□□□□ -1.36
CUL3-212ENST00000497715 DMTNQ08495 405 aa6.56□□□□□ -1.36
CUL3-212ENST00000497715 BANK1Q8NDB2 785 aa6.56□□□□□ -1.36
CUL3-212ENST00000497715 UTP14CQ5TAP6 766 aaKnown RBP6.55□□□□□ -1.36
CUL3-212ENST00000497715 SPTY2D1Q68D10 685 aaPredicted RBP6.55□□□□□ -1.36
CUL3-212ENST00000497715 PIK3R5Q8WYR1 880 aa6.55□□□□□ -1.36
CUL3-212ENST00000497715 GOLIM4O00461 696 aa6.55□□□□□ -1.36
CUL3-212ENST00000497715 TCERG1O14776 1098 aaKnown RBP6.55□□□□□ -1.36
CUL3-212ENST00000497715 RIPOR2Q9Y4F9 1068 aa6.55□□□□□ -1.36
CUL3-212ENST00000497715 BAZ1BQ9UIG0 1483 aaKnown RBP6.54□□□□□ -1.36
CUL3-212ENST00000497715 FRAT1Q92837 279 aaPredicted RBP6.54□□□□□ -1.36
CUL3-212ENST00000497715 HSP90AB3PQ58FF7 597 aa6.53□□□□□ -1.36
CUL3-212ENST00000497715 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
CUL3-212ENST00000497715 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.36
CUL3-212ENST00000497715 OTUD6BQ8N6M0 293 aa6.52□□□□□ -1.36
CUL3-212ENST00000497715 FOXD4Q12950 439 aaPredicted RBP6.52□□□□□ -1.37
CUL3-212ENST00000497715 SLC4A2P04920 1241 aa6.51□□□□□ -1.37
CUL3-212ENST00000497715 CEP120Q8N960 986 aa6.51□□□□□ -1.37
CUL3-212ENST00000497715 IRX5P78411 483 aaPredicted RBP6.51□□□□□ -1.37
CUL3-212ENST00000497715 MAP2K1Q02750 393 aaPredicted RBP6.51□□□□□ -1.37
CUL3-212ENST00000497715 APBB1IPQ7Z5R6 666 aaPredicted RBP6.51□□□□□ -1.37
CUL3-212ENST00000497715 RPS6KL1Q9Y6S9 549 aa6.51□□□□□ -1.37
CUL3-212ENST00000497715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.5□□□□□ -1.37
CUL3-212ENST00000497715 HAX1O00165 279 aa6.5□□□□□ -1.37
CUL3-212ENST00000497715 SMARCA5O60264 1052 aaPredicted RBP6.5□□□□□ -1.37
CUL3-212ENST00000497715 NBPF9Q3BBW0 867 aa6.5□□□□□ -1.37
CUL3-212ENST00000497715 NUTM2GQ5VZR2 741 aa6.5□□□□□ -1.37
CUL3-212ENST00000497715 GEMIN8Q9NWZ8 242 aaKnown RBP6.5□□□□□ -1.37
CUL3-212ENST00000497715 ZBTB47Q9UFB7 747 aaPredicted RBP6.5□□□□□ -1.37
CUL3-212ENST00000497715 NME8Q8N427 588 aa6.5□□□□□ -1.37
CUL3-212ENST00000497715 LMOD3Q0VAK6 560 aa6.49□□□□□ -1.37
CUL3-212ENST00000497715 DHX16O60231 1041 aaKnown RBP6.49□□□□□ -1.37
CUL3-212ENST00000497715 ZSCAN20P17040 1043 aaPredicted RBP6.49□□□□□ -1.37
CUL3-212ENST00000497715 SCP2P22307 547 aa6.49□□□□□ -1.37
CUL3-212ENST00000497715 SSFA2P28290 1259 aa6.49□□□□□ -1.37
CUL3-212ENST00000497715 MFAP1P55081 439 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 CT47A1Q5JQC4 288 aaPredicted RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 NOL8Q76FK4 1167 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 TRIM44Q96DX7 344 aaPredicted RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 CALR3Q96L12 384 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 GPBP1L1Q9HC44 474 aaPredicted RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 GOLGA6CA6NDK9 693 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 GOLGA6BA6NDN3 693 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 GOLGA6DP0CG33 693 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 TNNT2P45379 298 aaPredicted RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 TMC1Q8TDI8 760 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 ARHGEF1Q92888 912 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 GOLGA6AQ9NYA3 693 aa6.48□□□□□ -1.37
CUL3-212ENST00000497715 CGNQ9P2M7 1197 aaKnown RBP6.48□□□□□ -1.37
CUL3-212ENST00000497715 CCER2I3L3R5 266 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 APBB1O00213 710 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 HNRNPUL2Q1KMD3 747 aaKnown RBP6.47□□□□□ -1.37
CUL3-212ENST00000497715 CASC1Q6TDU7 716 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 TERF2IPQ9NYB0 399 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 IPO8O15397 1037 aaKnown RBP6.47□□□□□ -1.37
CUL3-212ENST00000497715 CLCN1P35523 988 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 NBPF10Q6P3W6 841 aaKnown RBP6.47□□□□□ -1.37
CUL3-212ENST00000497715 GET4Q7L5D6 327 aaPredicted RBP6.47□□□□□ -1.37
CUL3-212ENST00000497715 ERBB3P21860 1342 aa6.47□□□□□ -1.37
CUL3-212ENST00000497715 KIF20AO95235 890 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 TPM2P07951 284 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 PROCA1Q8NCQ7 364 aaPredicted RBP6.46□□□□□ -1.38
CUL3-212ENST00000497715 YY1AP1Q9H869 796 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 TESPA1A2RU30 521 aaPredicted RBP6.46□□□□□ -1.38
CUL3-212ENST00000497715 CAPN2P17655 700 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 RHBDL3P58872 404 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 SATB1Q01826 763 aa6.46□□□□□ -1.38
CUL3-212ENST00000497715 CCDC125Q86Z20 511 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 CREBRFQ8IUR6 639 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 PIP4P2Q8N4L2 257 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 GAS2L2Q8NHY3 880 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 RBM26Q5T8P6 1007 aaKnown RBP6.45□□□□□ -1.38
CUL3-212ENST00000497715 NBPF6Q5VWK0 638 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 NBPF5PQ86XG9 351 aaPredicted RBP6.45□□□□□ -1.38
CUL3-212ENST00000497715 NBPF4Q96M43 638 aa6.45□□□□□ -1.38
CUL3-212ENST00000497715 TAF3Q5VWG9 929 aa6.44□□□□□ -1.38
CUL3-212ENST00000497715 DDX46Q7L014 1031 aaKnown RBP6.44□□□□□ -1.38
CUL3-212ENST00000497715 AKT1S1Q96B36 256 aa6.44□□□□□ -1.38
CUL3-212ENST00000497715 MARCH6O60337 910 aa6.44□□□□□ -1.38
CUL3-212ENST00000497715 SLC20A2Q08357 652 aa6.44□□□□□ -1.38
CUL3-212ENST00000497715 SIRT1Q96EB6 747 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms