RNA–Protein interactions for RNA: ENST00000495178.1

ATXN1-209, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-209ENST00000495178 Q6ZNB5 142 aa9.7□□□□□ -0.86
ATXN1-209ENST00000495178 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
ATXN1-209ENST00000495178 COL9A1P20849 921 aa9.69□□□□□ -0.86
ATXN1-209ENST00000495178 MFSD10Q14728 455 aa9.68□□□□□ -0.86
ATXN1-209ENST00000495178 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
ATXN1-209ENST00000495178 KCNC4Q03721 635 aa9.67□□□□□ -0.86
ATXN1-209ENST00000495178 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
ATXN1-209ENST00000495178 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
ATXN1-209ENST00000495178 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
ATXN1-209ENST00000495178 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
ATXN1-209ENST00000495178 PHF14O94880 888 aa9.65□□□□□ -0.86
ATXN1-209ENST00000495178 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
ATXN1-209ENST00000495178 WBP1LQ9NX94 342 aa9.64□□□□□ -0.87
ATXN1-209ENST00000495178 GTPBP6O43824 516 aaPredicted RBP9.62□□□□□ -0.87
ATXN1-209ENST00000495178 LAPTM4AQ15012 233 aa9.62□□□□□ -0.87
ATXN1-209ENST00000495178 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
ATXN1-209ENST00000495178 TSR3Q9UJK0 312 aaKnown RBP9.59□□□□□ -0.87
ATXN1-209ENST00000495178 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
ATXN1-209ENST00000495178 EPAS1Q99814 870 aa9.58□□□□□ -0.88
ATXN1-209ENST00000495178 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
ATXN1-209ENST00000495178 TRIM6-TRIM34B2RNG4 842 aa9.57□□□□□ -0.88
ATXN1-209ENST00000495178 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
ATXN1-209ENST00000495178 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.56□□□□□ -0.88
ATXN1-209ENST00000495178 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
ATXN1-209ENST00000495178 GFRA3O60609 400 aa9.53□□□□□ -0.88
ATXN1-209ENST00000495178 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
ATXN1-209ENST00000495178 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
ATXN1-209ENST00000495178 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
ATXN1-209ENST00000495178 PACS2Q86VP3 889 aa9.48□□□□□ -0.89
ATXN1-209ENST00000495178 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
ATXN1-209ENST00000495178 PPP4CP60510 307 aa9.47□□□□□ -0.89
ATXN1-209ENST00000495178 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
ATXN1-209ENST00000495178 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
ATXN1-209ENST00000495178 DPYSL4O14531 572 aa9.46□□□□□ -0.9
ATXN1-209ENST00000495178 PRKD2Q9BZL6 878 aa9.45□□□□□ -0.9
ATXN1-209ENST00000495178 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
ATXN1-209ENST00000495178 DDX12PQ92771 950 aa9.44□□□□□ -0.9
ATXN1-209ENST00000495178 V9GY48 417 aaPredicted RBP9.44□□□□□ -0.9
ATXN1-209ENST00000495178 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
ATXN1-209ENST00000495178 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
ATXN1-209ENST00000495178 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
ATXN1-209ENST00000495178 MAP3K7O43318 606 aa9.4□□□□□ -0.9
ATXN1-209ENST00000495178 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
ATXN1-209ENST00000495178 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
ATXN1-209ENST00000495178 MTRQ99707 1265 aa9.4□□□□□ -0.9
ATXN1-209ENST00000495178 NBR1Q14596 966 aa9.39□□□□□ -0.91
ATXN1-209ENST00000495178 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
ATXN1-209ENST00000495178 PRSS12P56730 875 aa9.36□□□□□ -0.91
ATXN1-209ENST00000495178 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
ATXN1-209ENST00000495178 SMAPO00193 183 aa9.35□□□□□ -0.91
ATXN1-209ENST00000495178 PDIA6Q15084 440 aa9.35□□□□□ -0.91
ATXN1-209ENST00000495178 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
ATXN1-209ENST00000495178 ZNF787Q6DD87 383 aa9.34□□□□□ -0.91
ATXN1-209ENST00000495178 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
ATXN1-209ENST00000495178 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
ATXN1-209ENST00000495178 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
ATXN1-209ENST00000495178 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
ATXN1-209ENST00000495178 TATDN2Q93075 761 aa9.33□□□□□ -0.92
ATXN1-209ENST00000495178 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
ATXN1-209ENST00000495178 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
ATXN1-209ENST00000495178 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
ATXN1-209ENST00000495178 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
ATXN1-209ENST00000495178 APLP1P51693 650 aa9.3□□□□□ -0.92
ATXN1-209ENST00000495178 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
ATXN1-209ENST00000495178 DCAF8L2P0C7V8 631 aa9.29□□□□□ -0.92
ATXN1-209ENST00000495178 GGCXP38435 758 aa9.29□□□□□ -0.92
ATXN1-209ENST00000495178 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
ATXN1-209ENST00000495178 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
ATXN1-209ENST00000495178 RNF40O75150 1001 aa9.27□□□□□ -0.93
ATXN1-209ENST00000495178 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
ATXN1-209ENST00000495178 RBM27Q9P2N5 1060 aaKnown RBP9.27□□□□□ -0.93
ATXN1-209ENST00000495178 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
ATXN1-209ENST00000495178 NUDT18Q6ZVK8 323 aa9.26□□□□□ -0.93
ATXN1-209ENST00000495178 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
ATXN1-209ENST00000495178 COPS2P61201 443 aa9.22□□□□□ -0.93
ATXN1-209ENST00000495178 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
ATXN1-209ENST00000495178 ZPR1O75312 459 aa9.2□□□□□ -0.94
ATXN1-209ENST00000495178 TRIM67Q6ZTA4 783 aa9.2□□□□□ -0.94
ATXN1-209ENST00000495178 CDHR5Q9HBB8 845 aa9.2□□□□□ -0.94
ATXN1-209ENST00000495178 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
ATXN1-209ENST00000495178 OSBPP22059 807 aa9.19□□□□□ -0.94
ATXN1-209ENST00000495178 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
ATXN1-209ENST00000495178 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
ATXN1-209ENST00000495178 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
ATXN1-209ENST00000495178 SLC19A1P41440 591 aa9.17□□□□□ -0.94
ATXN1-209ENST00000495178 E2F4Q16254 413 aa9.17□□□□□ -0.94
ATXN1-209ENST00000495178 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
ATXN1-209ENST00000495178 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
ATXN1-209ENST00000495178 PRR14Q9BWN1 585 aa9.17□□□□□ -0.94
ATXN1-209ENST00000495178 DGAT1O75907 488 aa9.16□□□□□ -0.94
ATXN1-209ENST00000495178 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
ATXN1-209ENST00000495178 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
ATXN1-209ENST00000495178 MYT1Q01538 1121 aa9.15□□□□□ -0.94
ATXN1-209ENST00000495178 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
ATXN1-209ENST00000495178 PRR20EP86478 221 aa9.14□□□□□ -0.95
ATXN1-209ENST00000495178 PRR20CP86479 221 aa9.14□□□□□ -0.95
ATXN1-209ENST00000495178 PRR20DP86480 221 aa9.14□□□□□ -0.95
ATXN1-209ENST00000495178 PRR20BP86481 221 aa9.14□□□□□ -0.95
ATXN1-209ENST00000495178 PRR20AP86496 221 aa9.14□□□□□ -0.95
ATXN1-209ENST00000495178 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms