RNA–Protein interactions for RNA: ENST00000495083.1

MDH1-214, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-214ENST00000495083 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
MDH1-214ENST00000495083 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
MDH1-214ENST00000495083 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
MDH1-214ENST00000495083 BCAMP50895 628 aa12.42□□□□□ -0.42
MDH1-214ENST00000495083 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
MDH1-214ENST00000495083 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
MDH1-214ENST00000495083 KIAA1468Q9P260 1216 aa12.4□□□□□ -0.42
MDH1-214ENST00000495083 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
MDH1-214ENST00000495083 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
MDH1-214ENST00000495083 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
MDH1-214ENST00000495083 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
MDH1-214ENST00000495083 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
MDH1-214ENST00000495083 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
MDH1-214ENST00000495083 EPAS1Q99814 870 aa12.33□□□□□ -0.44
MDH1-214ENST00000495083 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
MDH1-214ENST00000495083 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
MDH1-214ENST00000495083 DPYSL4O14531 572 aa12.3□□□□□ -0.44
MDH1-214ENST00000495083 TRIM6-TRIM34B2RNG4 842 aa12.29□□□□□ -0.44
MDH1-214ENST00000495083 KCNC4Q03721 635 aa12.27□□□□□ -0.45
MDH1-214ENST00000495083 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
MDH1-214ENST00000495083 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
MDH1-214ENST00000495083 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
MDH1-214ENST00000495083 DDX12PQ92771 950 aa12.24□□□□□ -0.45
MDH1-214ENST00000495083 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
MDH1-214ENST00000495083 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
MDH1-214ENST00000495083 HPS5Q9UPZ3 1129 aa12.21□□□□□ -0.45
MDH1-214ENST00000495083 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
MDH1-214ENST00000495083 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
MDH1-214ENST00000495083 Q6ZNB5 142 aa12.19□□□□□ -0.46
MDH1-214ENST00000495083 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
MDH1-214ENST00000495083 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
MDH1-214ENST00000495083 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
MDH1-214ENST00000495083 NBR1Q14596 966 aa12.14□□□□□ -0.47
MDH1-214ENST00000495083 LCE2BO14633 110 aa12.13□□□□□ -0.47
MDH1-214ENST00000495083 MAP3K7O43318 606 aa12.13□□□□□ -0.47
MDH1-214ENST00000495083 PDIA6Q15084 440 aa12.13□□□□□ -0.47
MDH1-214ENST00000495083 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
MDH1-214ENST00000495083 FAM198AQ9UFP1 575 aa12.12□□□□□ -0.47
MDH1-214ENST00000495083 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
MDH1-214ENST00000495083 SMAPO00193 183 aa12.1□□□□□ -0.47
MDH1-214ENST00000495083 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
MDH1-214ENST00000495083 PPP4CP60510 307 aa12.1□□□□□ -0.47
MDH1-214ENST00000495083 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
MDH1-214ENST00000495083 PRSS12P56730 875 aa12.08□□□□□ -0.48
MDH1-214ENST00000495083 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
MDH1-214ENST00000495083 LAPTM4AQ15012 233 aa12.07□□□□□ -0.48
MDH1-214ENST00000495083 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
MDH1-214ENST00000495083 GFRA3O60609 400 aa12.04□□□□□ -0.48
MDH1-214ENST00000495083 MTRQ99707 1265 aa12.03□□□□□ -0.48
MDH1-214ENST00000495083 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
MDH1-214ENST00000495083 TATDN2Q93075 761 aa12.02□□□□□ -0.49
MDH1-214ENST00000495083 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
MDH1-214ENST00000495083 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
MDH1-214ENST00000495083 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
MDH1-214ENST00000495083 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
MDH1-214ENST00000495083 IL21Q9HBE4 155 aa12□□□□□ -0.49
MDH1-214ENST00000495083 ZNF516Q92618 1163 aa11.99□□□□□ -0.49
MDH1-214ENST00000495083 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
MDH1-214ENST00000495083 ARIH1Q9Y4X5 557 aaPredicted RBP11.99□□□□□ -0.49
MDH1-214ENST00000495083 GRXCR2A6NFK2 248 aa11.98□□□□□ -0.49
MDH1-214ENST00000495083 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
MDH1-214ENST00000495083 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
MDH1-214ENST00000495083 OSBPP22059 807 aa11.96□□□□□ -0.49
MDH1-214ENST00000495083 E2F4Q16254 413 aa11.96□□□□□ -0.49
MDH1-214ENST00000495083 APLP1P51693 650 aa11.95□□□□□ -0.5
MDH1-214ENST00000495083 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
MDH1-214ENST00000495083 V9GY48 417 aaPredicted RBP11.95□□□□□ -0.5
MDH1-214ENST00000495083 NRG2O14511 850 aaPredicted RBP11.94□□□□□ -0.5
MDH1-214ENST00000495083 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
MDH1-214ENST00000495083 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
MDH1-214ENST00000495083 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
MDH1-214ENST00000495083 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
MDH1-214ENST00000495083 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
MDH1-214ENST00000495083 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
MDH1-214ENST00000495083 RNF40O75150 1001 aa11.88□□□□□ -0.51
MDH1-214ENST00000495083 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
MDH1-214ENST00000495083 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
MDH1-214ENST00000495083 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
MDH1-214ENST00000495083 COPS2P61201 443 aa11.83□□□□□ -0.52
MDH1-214ENST00000495083 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
MDH1-214ENST00000495083 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
MDH1-214ENST00000495083 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
MDH1-214ENST00000495083 EYA1Q99502 592 aa11.81□□□□□ -0.52
MDH1-214ENST00000495083 NECTIN2Q92692 538 aa11.79□□□□□ -0.52
MDH1-214ENST00000495083 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
MDH1-214ENST00000495083 ZPR1O75312 459 aa11.78□□□□□ -0.52
MDH1-214ENST00000495083 GGCXP38435 758 aa11.78□□□□□ -0.52
MDH1-214ENST00000495083 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.78□□□□□ -0.52
MDH1-214ENST00000495083 ZNF787Q6DD87 383 aa11.76□□□□□ -0.53
MDH1-214ENST00000495083 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
MDH1-214ENST00000495083 TRIM67Q6ZTA4 783 aa11.75□□□□□ -0.53
MDH1-214ENST00000495083 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
MDH1-214ENST00000495083 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
MDH1-214ENST00000495083 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
MDH1-214ENST00000495083 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
MDH1-214ENST00000495083 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
MDH1-214ENST00000495083 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
MDH1-214ENST00000495083 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
MDH1-214ENST00000495083 SLC19A1P41440 591 aa11.68□□□□□ -0.54
MDH1-214ENST00000495083 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms