RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 HOXB1P14653 301 aaPredicted RBP7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 FECHP22830 423 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 MAP2K5Q13163 448 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 C6orf132Q5T0Z8 1188 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 IRF6O14896 467 aa7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 ADAM33Q9BZ11 813 aa7.57□□□□□ -1.2
AC055855.1-201ENST00000489563 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
AC055855.1-201ENST00000489563 TRIM66O15016 1216 aa7.56□□□□□ -1.2
AC055855.1-201ENST00000489563 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
AC055855.1-201ENST00000489563 CCDC102AQ96A19 550 aa7.55□□□□□ -1.2
AC055855.1-201ENST00000489563 PDE4DQ08499 809 aa7.54□□□□□ -1.2
AC055855.1-201ENST00000489563 PTPREP23469 700 aa7.52□□□□□ -1.21
AC055855.1-201ENST00000489563 BCL2L12Q9HB09 334 aa7.52□□□□□ -1.21
AC055855.1-201ENST00000489563 TMEM132AQ24JP5 1023 aa7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 ERBB3P21860 1342 aa7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 ST18O60284 1047 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 KCNH8Q96L42 1107 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 PRSS12P56730 875 aa7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 FAM163AQ96GL9 167 aaPredicted RBP7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 OATP04181 439 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 COL9A1P20849 921 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 EMP3P54852 163 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 AMHR2Q16671 573 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 VARS2Q5ST30 1063 aaKnown RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 RBM27Q9P2N5 1060 aaKnown RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 TTC13Q8NBP0 860 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 DAXXQ9UER7 740 aaPredicted RBP7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 ADGRG1Q9Y653 693 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 PARP9Q8IXQ6 854 aa7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 RBM46Q8TBY0 533 aaKnown RBP7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 CLCN1P35523 988 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PXYLP1Q8TE99 480 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 TSKSQ9UJT2 592 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 ARHGAP33O14559 1287 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 PSEN2P49810 448 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 PROX2Q3B8N5 592 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NUDT18Q6ZVK8 323 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NLRP7Q8WX94 980 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 GPCPD1Q9NPB8 672 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 AXIN2Q9Y2T1 843 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 TATDN2Q93075 761 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 REPIN1Q9BWE0 567 aaKnown RBP7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM117AQ9C073 453 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ONECUT3O60422 494 aaPredicted RBP7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 PBX2P40425 430 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 RCCD1A6NED2 376 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEEQ6S8J3 1075 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 HS3ST6Q96QI5 342 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 EYA1Q99502 592 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 SMAPO00193 183 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 MS4A1P11836 297 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 C3orf80F5H4A9 247 aa7.36□□□□□ -1.23
AC055855.1-201ENST00000489563 DNAJB2P25686 324 aa7.36□□□□□ -1.23
AC055855.1-201ENST00000489563 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 FAM217BQ9NTX9 383 aaPredicted RBP7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 RABGEF1Q9UJ41 708 aa7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 VPS9D1Q9Y2B5 631 aa7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 SULF1Q8IWU6 871 aa7.32□□□□□ -1.24
AC055855.1-201ENST00000489563 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
AC055855.1-201ENST00000489563 DDX11L8A8MPP1 907 aa7.31□□□□□ -1.24
AC055855.1-201ENST00000489563 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms