RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 HOXB1P14653 301 aaPredicted RBP7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 FECHP22830 423 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 MAP2K5Q13163 448 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 C6orf132Q5T0Z8 1188 aa7.59□□□□□ -1.19
AC055855.1-201ENST00000489563 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 IRF6O14896 467 aa7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
AC055855.1-201ENST00000489563 ADAM33Q9BZ11 813 aa7.57□□□□□ -1.2
AC055855.1-201ENST00000489563 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
AC055855.1-201ENST00000489563 TRIM66O15016 1216 aa7.56□□□□□ -1.2
AC055855.1-201ENST00000489563 CERKQ8TCT0 537 aa7.56□□□□□ -1.2
AC055855.1-201ENST00000489563 CCDC102AQ96A19 550 aa7.55□□□□□ -1.2
AC055855.1-201ENST00000489563 PDE4DQ08499 809 aa7.54□□□□□ -1.2
AC055855.1-201ENST00000489563 PTPREP23469 700 aa7.52□□□□□ -1.21
AC055855.1-201ENST00000489563 BCL2L12Q9HB09 334 aa7.52□□□□□ -1.21
AC055855.1-201ENST00000489563 TMEM132AQ24JP5 1023 aa7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 ERBB3P21860 1342 aa7.51□□□□□ -1.21
AC055855.1-201ENST00000489563 ST18O60284 1047 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 KCNH8Q96L42 1107 aa7.5□□□□□ -1.21
AC055855.1-201ENST00000489563 PRSS12P56730 875 aa7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 FAM163AQ96GL9 167 aaPredicted RBP7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
AC055855.1-201ENST00000489563 OATP04181 439 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 COL9A1P20849 921 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 EMP3P54852 163 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 AMHR2Q16671 573 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 VARS2Q5ST30 1063 aaKnown RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 RBM27Q9P2N5 1060 aaKnown RBP7.48□□□□□ -1.21
AC055855.1-201ENST00000489563 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 MARVELD3Q96A59 401 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
AC055855.1-201ENST00000489563 TTC13Q8NBP0 860 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 DAXXQ9UER7 740 aaPredicted RBP7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 ADGRG1Q9Y653 693 aa7.45□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM205CA6NFA0 338 aa7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 PARP9Q8IXQ6 854 aa7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 RBM46Q8TBY0 533 aaKnown RBP7.44□□□□□ -1.22
AC055855.1-201ENST00000489563 CLCN1P35523 988 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PXYLP1Q8TE99 480 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 PHOX2BQ99453 314 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 TSKSQ9UJT2 592 aa7.43□□□□□ -1.22
AC055855.1-201ENST00000489563 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 ARHGAP33O14559 1287 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 PSEN2P49810 448 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 PROX2Q3B8N5 592 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
AC055855.1-201ENST00000489563 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NUDT18Q6ZVK8 323 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NLRP7Q8WX94 980 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 GPCPD1Q9NPB8 672 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 PNMA3Q9UL41 463 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 AXIN2Q9Y2T1 843 aa7.41□□□□□ -1.22
AC055855.1-201ENST00000489563 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 TATDN2Q93075 761 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 REPIN1Q9BWE0 567 aaKnown RBP7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 FAM117AQ9C073 453 aa7.4□□□□□ -1.22
AC055855.1-201ENST00000489563 ONECUT3O60422 494 aaPredicted RBP7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 PBX2P40425 430 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 KIAA1468Q9P260 1216 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
AC055855.1-201ENST00000489563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 RCCD1A6NED2 376 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEEQ6S8J3 1075 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 HS3ST6Q96QI5 342 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 EYA1Q99502 592 aa7.38□□□□□ -1.23
AC055855.1-201ENST00000489563 SMAPO00193 183 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 MS4A1P11836 297 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 DMRTA1Q5VZB9 504 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
AC055855.1-201ENST00000489563 C3orf80F5H4A9 247 aa7.36□□□□□ -1.23
AC055855.1-201ENST00000489563 DNAJB2P25686 324 aa7.36□□□□□ -1.23
AC055855.1-201ENST00000489563 SLC4A5Q9BY07 1137 aa7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 FAM217BQ9NTX9 383 aaPredicted RBP7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 RABGEF1Q9UJ41 708 aa7.35□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
AC055855.1-201ENST00000489563 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 SEPT9Q9UHD8 586 aaPredicted RBP7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 VPS9D1Q9Y2B5 631 aa7.33□□□□□ -1.24
AC055855.1-201ENST00000489563 SULF1Q8IWU6 871 aa7.32□□□□□ -1.24
AC055855.1-201ENST00000489563 TMEM134Q9H6X4 195 aa7.32□□□□□ -1.24
AC055855.1-201ENST00000489563 DDX11L8A8MPP1 907 aa7.31□□□□□ -1.24
AC055855.1-201ENST00000489563 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms