RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 POTEJP0CG39 1038 aa4.5□□□□□ -1.69
ABCA4-206ENST00000484388 HOXB3P14651 431 aaPredicted RBP4.5□□□□□ -1.69
ABCA4-206ENST00000484388 C14orf37Q86TY3 774 aa4.5□□□□□ -1.69
ABCA4-206ENST00000484388 FAM117AQ9C073 453 aa4.5□□□□□ -1.69
ABCA4-206ENST00000484388 PLEKHG3A1L390 1219 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 RIMBP2O15034 1052 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 TSR1Q2NL82 804 aaKnown RBP4.49□□□□□ -1.69
ABCA4-206ENST00000484388 GPR153Q6NV75 609 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 MAMSTRQ6ZN01 415 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 ZDHHC16Q969W1 377 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 RBM33Q96EV2 1170 aaKnown RBP4.49□□□□□ -1.69
ABCA4-206ENST00000484388 TMUB1Q9BVT8 246 aa4.49□□□□□ -1.69
ABCA4-206ENST00000484388 RBM27Q9P2N5 1060 aaKnown RBP4.49□□□□□ -1.69
ABCA4-206ENST00000484388 POTEB2H3BUK9 544 aa4.48□□□□□ -1.69
ABCA4-206ENST00000484388 C6orf132Q5T0Z8 1188 aa4.48□□□□□ -1.69
ABCA4-206ENST00000484388 TTC13Q8NBP0 860 aa4.48□□□□□ -1.69
ABCA4-206ENST00000484388 GOPCQ9HD26 462 aa4.48□□□□□ -1.69
ABCA4-206ENST00000484388 PSDA5PKW4 1024 aaPredicted RBP4.47□□□□□ -1.69
ABCA4-206ENST00000484388 OATP04181 439 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 NUDT7P0C024 238 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 CLCN1P35523 988 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 TTLL12Q14166 644 aaPredicted RBP4.47□□□□□ -1.69
ABCA4-206ENST00000484388 ARSIQ5FYB1 569 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 GIGYF2Q6Y7W6 1299 aaKnown RBP4.47□□□□□ -1.69
ABCA4-206ENST00000484388 ZNF454Q8N9F8 522 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 SCUBE2Q9NQ36 999 aa4.47□□□□□ -1.69
ABCA4-206ENST00000484388 MS4A1P11836 297 aa4.46□□□□□ -1.7
ABCA4-206ENST00000484388 KHSRPQ92945 711 aaKnown RBP eCLIP4.46□□□□□ -1.7
ABCA4-206ENST00000484388 PHOX2BQ99453 314 aa4.46□□□□□ -1.7
ABCA4-206ENST00000484388 GPCPD1Q9NPB8 672 aa4.46□□□□□ -1.7
ABCA4-206ENST00000484388 PRSS12P56730 875 aa4.45□□□□□ -1.7
ABCA4-206ENST00000484388 PADI6Q6TGC4 694 aa4.45□□□□□ -1.7
ABCA4-206ENST00000484388 METTL3Q86U44 580 aaKnown RBP4.45□□□□□ -1.7
ABCA4-206ENST00000484388 PXYLP1Q8TE99 480 aa4.45□□□□□ -1.7
ABCA4-206ENST00000484388 REPIN1Q9BWE0 567 aaKnown RBP4.45□□□□□ -1.7
ABCA4-206ENST00000484388 ADAM33Q9BZ11 813 aa4.45□□□□□ -1.7
ABCA4-206ENST00000484388 ADGRG1Q9Y653 693 aa4.45□□□□□ -1.7
ABCA4-206ENST00000484388 SNPHO15079 494 aa4.44□□□□□ -1.7
ABCA4-206ENST00000484388 MDM2Q00987 491 aaPredicted RBP4.44□□□□□ -1.7
ABCA4-206ENST00000484388 ZNF710Q8N1W2 664 aa4.44□□□□□ -1.7
ABCA4-206ENST00000484388 LHX6Q9UPM6 363 aa4.44□□□□□ -1.7
ABCA4-206ENST00000484388 SSTR3P32745 418 aaPredicted RBP4.43□□□□□ -1.7
ABCA4-206ENST00000484388 SH3D19Q5HYK7 790 aa4.43□□□□□ -1.7
ABCA4-206ENST00000484388 PPP4R3BQ5MIZ7 849 aa4.43□□□□□ -1.7
ABCA4-206ENST00000484388 BCL2L12Q9HB09 334 aa4.43□□□□□ -1.7
ABCA4-206ENST00000484388 FAM217BQ9NTX9 383 aaPredicted RBP4.43□□□□□ -1.7
ABCA4-206ENST00000484388 HOXB1P14653 301 aaPredicted RBP4.42□□□□□ -1.7
ABCA4-206ENST00000484388 RBM46Q8TBY0 533 aaKnown RBP4.42□□□□□ -1.7
ABCA4-206ENST00000484388 CDCA7LQ96GN5 454 aa4.42□□□□□ -1.7
ABCA4-206ENST00000484388 RSPH6AQ9H0K4 717 aa4.42□□□□□ -1.7
ABCA4-206ENST00000484388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.41□□□□□ -1.7
ABCA4-206ENST00000484388 PPP1R3GB7ZBB8 358 aa4.41□□□□□ -1.7
ABCA4-206ENST00000484388 ONECUT3O60422 494 aaPredicted RBP4.41□□□□□ -1.7
ABCA4-206ENST00000484388 COL9A1P20849 921 aa4.41□□□□□ -1.7
ABCA4-206ENST00000484388 SKIV2LQ15477 1246 aaKnown RBP4.41□□□□□ -1.7
ABCA4-206ENST00000484388 FAM161AQ3B820 660 aa4.41□□□□□ -1.7
ABCA4-206ENST00000484388 PCMTD1Q96MG8 357 aaPredicted RBP4.41□□□□□ -1.7
ABCA4-206ENST00000484388 EYA1Q99502 592 aa4.41□□□□□ -1.7
ABCA4-206ENST00000484388 PTPREP23469 700 aa4.4□□□□□ -1.71
ABCA4-206ENST00000484388 FLIIQ13045 1269 aa4.4□□□□□ -1.71
ABCA4-206ENST00000484388 BEGAINQ9BUH8 593 aa4.4□□□□□ -1.71
ABCA4-206ENST00000484388 ZMYND15Q9H091 742 aa4.4□□□□□ -1.71
ABCA4-206ENST00000484388 FAM198AQ9UFP1 575 aa4.4□□□□□ -1.71
ABCA4-206ENST00000484388 DIXDC1Q155Q3 683 aa4.39□□□□□ -1.71
ABCA4-206ENST00000484388 ARXQ96QS3 562 aa4.39□□□□□ -1.71
ABCA4-206ENST00000484388 RCCD1A6NED2 376 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 TRIM6-TRIM34B2RNG4 842 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 NBPF26B4DH59 902 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 PACS2Q86VP3 889 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 NLRP7Q8WX94 980 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 TSKSQ9UJT2 592 aa4.38□□□□□ -1.71
ABCA4-206ENST00000484388 DNAJB2P25686 324 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 MYSM1Q5VVJ2 828 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 NUDT18Q6ZVK8 323 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 SULF1Q8IWU6 871 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 TATDN2Q93075 761 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
ABCA4-206ENST00000484388 C3orf80F5H4A9 247 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 CD46P15529 392 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 KCNH8Q96L42 1107 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.36□□□□□ -1.71
ABCA4-206ENST00000484388 SLC4A5Q9BY07 1137 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 TBC1D2Q9BYX2 928 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 TMEM134Q9H6X4 195 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 PNMA3Q9UL41 463 aa4.36□□□□□ -1.71
ABCA4-206ENST00000484388 SUPT5HO00267 1087 aaKnown RBP4.35□□□□□ -1.71
ABCA4-206ENST00000484388 GJA5P36382 358 aa4.35□□□□□ -1.71
ABCA4-206ENST00000484388 TUSC1Q2TAM9 212 aa4.35□□□□□ -1.71
ABCA4-206ENST00000484388 PROCA1Q8NCQ7 364 aaPredicted RBP4.35□□□□□ -1.71
ABCA4-206ENST00000484388 ZBED2Q9BTP6 218 aa4.35□□□□□ -1.71
ABCA4-206ENST00000484388 A6NJR5 290 aa4.34□□□□□ -1.71
ABCA4-206ENST00000484388 CLK2P49760 499 aaKnown RBP4.34□□□□□ -1.71
ABCA4-206ENST00000484388 MCM6Q14566 821 aa4.34□□□□□ -1.71
ABCA4-206ENST00000484388 PROX2Q3B8N5 592 aa4.34□□□□□ -1.71
ABCA4-206ENST00000484388 KCNK17Q96T54 332 aa4.34□□□□□ -1.71
ABCA4-206ENST00000484388 POLR3EQ9NVU0 708 aa4.34□□□□□ -1.71
ABCA4-206ENST00000484388 ARHGAP33O14559 1287 aa4.33□□□□□ -1.72
ABCA4-206ENST00000484388 SPTLC1O15269 473 aa4.33□□□□□ -1.72
ABCA4-206ENST00000484388 PPP2R2DQ66LE6 453 aa4.33□□□□□ -1.72
ABCA4-206ENST00000484388 SPIRE2Q8WWL2 714 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms