RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 HSCBQ8IWL3 235 aa5□□□□□ -1.61
FNDC3A-203ENST00000484074 HIRIP3Q9BW71 556 aaPredicted RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 SENP3-EIF4A1A0A087X0R7 540 aa5□□□□□ -1.61
FNDC3A-203ENST00000484074 TPD52L1Q16890 204 aaPredicted RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 C16orf71Q8IYS4 520 aaPredicted RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 NGEFQ8N5V2 710 aa5□□□□□ -1.61
FNDC3A-203ENST00000484074 IKQ13123 557 aaPredicted RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 OSCARQ8IYS5 282 aa5□□□□□ -1.61
FNDC3A-203ENST00000484074 ABCF1Q8NE71 845 aaKnown RBP eCLIP5□□□□□ -1.61
FNDC3A-203ENST00000484074 WDR70Q9NW82 654 aa5□□□□□ -1.61
FNDC3A-203ENST00000484074 ZCCHC6Q5VYS8 1495 aaKnown RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 HMGB2P26583 209 aaKnown RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 LRRFIP1Q32MZ4 808 aaKnown RBP5□□□□□ -1.61
FNDC3A-203ENST00000484074 TRIM6-TRIM34B2RNG4 842 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 SLC4A10Q6U841 1118 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 RB1CC1Q8TDY2 1594 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 TPM3P06753 285 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 RGS3P49796 1198 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 IRX6P78412 446 aaPredicted RBP4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 KIF3BO15066 747 aa4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 U2AF1L5P0DN76 240 aaPredicted RBP4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 BRD2P25440 801 aaKnown RBP4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 U2AF1Q01081 240 aaKnown RBP eCLIP4.99□□□□□ -1.61
FNDC3A-203ENST00000484074 HMMRO75330 724 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 SLC4A3P48751 1232 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 ODF2Q5BJF6 829 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.98□□□□□ -1.611e-6■■□□□ 13.5
FNDC3A-203ENST00000484074 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 USP35Q9P2H5 1018 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 EIF3AQ14152 1382 aaKnown RBP4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 LMOD3Q0VAK6 560 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 NEXNQ0ZGT2 675 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 TSR1Q2NL82 804 aaKnown RBP4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 TEFQ10587 303 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 KIF3AQ9Y496 699 aa4.98□□□□□ -1.61
FNDC3A-203ENST00000484074 BAZ1BQ9UIG0 1483 aaKnown RBP4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 GOLGA6L1Q8N7Z2 621 aa4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 APPP05067 770 aa4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 FAM69CQ0P6D2 419 aa4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 SF3A1Q15459 793 aaKnown RBP4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 ITPRIPQ8IWB1 547 aa4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 CT47A1Q5JQC4 288 aaPredicted RBP4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 CHMP4CQ96CF2 233 aa4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 NAP1L5Q96NT1 182 aaPredicted RBP4.97□□□□□ -1.61
FNDC3A-203ENST00000484074 ERICH2A1L162 156 aa4.96□□□□□ -1.61
FNDC3A-203ENST00000484074 DCAF1Q9Y4B6 1507 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 IBSPP21815 317 aaPredicted RBP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 MPHOSPH10O00566 681 aaKnown RBP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 TRIM29Q14134 588 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 TTLL12Q14166 644 aaPredicted RBP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 CCDC27Q2M243 656 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 CCDC97Q96F63 343 aaPredicted RBP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 PCMTD1Q96MG8 357 aaPredicted RBP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 FYB1O15117 783 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 CSPP1Q1MSJ5 1256 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 RBM5P52756 815 aaKnown RBP eCLIP4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 COG3Q96JB2 828 aa4.96□□□□□ -1.62
FNDC3A-203ENST00000484074 KIF27Q86VH2 1401 aa4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 MYCNP04198 464 aaPredicted RBP4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 PDE3BQ13370 1112 aa4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 ZNF710Q8N1W2 664 aa4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 BCL11BQ9C0K0 894 aaPredicted RBP4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 CCDC180Q9P1Z9 1646 aa4.95□□□□□ -1.62
FNDC3A-203ENST00000484074 H3BQV1 296 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 IFFO2Q5TF58 517 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 ZFYVE27Q5T4F4 411 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 DDX58O95786 925 aaKnown RBP4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 TPM1P09493 284 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 STRN4Q9NRL3 753 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 PDS5BQ9NTI5 1447 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 CPLX2Q6PUV4 134 aaKnown RBP4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 NFXL1Q6ZNB6 911 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 KIF16BQ96L93 1317 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 NLRP2Q9NX02 1062 aa4.94□□□□□ -1.62
FNDC3A-203ENST00000484074 EIF2S2P20042 333 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 KIF6Q6ZMV9 814 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 PROSER2Q86WR7 435 aaPredicted RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 FAM184AQ8NB25 1140 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 SYAP1Q96A49 352 aaPredicted RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 C9orf78Q9NZ63 289 aaPredicted RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 TRDNQ13061 729 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 RBM42Q9BTD8 480 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 FAM177BA6PVY3 158 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 MSNP26038 577 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 RDXP35241 583 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 GRM1Q13255 1194 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 TRIM21P19474 475 aaKnown RBP4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 SPRYD3Q8NCJ5 442 aa4.93□□□□□ -1.62
FNDC3A-203ENST00000484074 CCDC70Q6NSX1 233 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 MTMR7Q9Y216 660 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 PLCD3Q8N3E9 789 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 NEBLO76041 1014 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 EPS15P42566 896 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 ANKRD20A12PQ8NF67 263 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 ROCK2O75116 1388 aaKnown RBP4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 CA8P35219 290 aa4.92□□□□□ -1.62
FNDC3A-203ENST00000484074 SLC3A2P08195 630 aaKnown RBP4.91□□□□□ -1.62
FNDC3A-203ENST00000484074 CHMP4BP1P59074 171 aa4.91□□□□□ -1.62
FNDC3A-203ENST00000484074 NOL8Q76FK4 1167 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms