RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 MAP3K7O43318 606 aa9.49□□□□□ -0.89
FNDC3B-210ENST00000483344 NUDT7P0C024 238 aa9.49□□□□□ -0.89
FNDC3B-210ENST00000483344 HIC1Q14526 733 aa9.49□□□□□ -0.89
FNDC3B-210ENST00000483344 GNPATO15228 680 aa9.48□□□□□ -0.89
FNDC3B-210ENST00000483344 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
FNDC3B-210ENST00000483344 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
FNDC3B-210ENST00000483344 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.89
FNDC3B-210ENST00000483344 FBXW7Q969H0 707 aa9.48□□□□□ -0.89
FNDC3B-210ENST00000483344 PTGDRQ13258 359 aa9.47□□□□□ -0.89
FNDC3B-210ENST00000483344 NEUROD2Q15784 382 aa9.47□□□□□ -0.89
FNDC3B-210ENST00000483344 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
FNDC3B-210ENST00000483344 FOSBP53539 338 aa9.46□□□□□ -0.9
FNDC3B-210ENST00000483344 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
FNDC3B-210ENST00000483344 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
FNDC3B-210ENST00000483344 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
FNDC3B-210ENST00000483344 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
FNDC3B-210ENST00000483344 IRF6O14896 467 aa9.43□□□□□ -0.9
FNDC3B-210ENST00000483344 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
FNDC3B-210ENST00000483344 TSR1Q2NL82 804 aaKnown RBP9.43□□□□□ -0.9
FNDC3B-210ENST00000483344 CDHR5Q9HBB8 845 aa9.43□□□□□ -0.9
FNDC3B-210ENST00000483344 TRIM66O15016 1216 aa9.42□□□□□ -0.9
FNDC3B-210ENST00000483344 FECHP22830 423 aa9.42□□□□□ -0.9
FNDC3B-210ENST00000483344 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
FNDC3B-210ENST00000483344 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
FNDC3B-210ENST00000483344 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
FNDC3B-210ENST00000483344 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
FNDC3B-210ENST00000483344 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
FNDC3B-210ENST00000483344 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
FNDC3B-210ENST00000483344 PDE4DQ08499 809 aa9.39□□□□□ -0.91
FNDC3B-210ENST00000483344 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
FNDC3B-210ENST00000483344 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
FNDC3B-210ENST00000483344 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
FNDC3B-210ENST00000483344 ERBB3P21860 1342 aa9.37□□□□□ -0.91
FNDC3B-210ENST00000483344 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
FNDC3B-210ENST00000483344 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
FNDC3B-210ENST00000483344 AMHR2Q16671 573 aa9.34□□□□□ -0.91
FNDC3B-210ENST00000483344 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
FNDC3B-210ENST00000483344 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
FNDC3B-210ENST00000483344 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
FNDC3B-210ENST00000483344 DAXXQ9UER7 740 aaPredicted RBP9.32□□□□□ -0.92
FNDC3B-210ENST00000483344 PTPREP23469 700 aa9.31□□□□□ -0.92
FNDC3B-210ENST00000483344 PADI6Q6TGC4 694 aa9.31□□□□□ -0.92
FNDC3B-210ENST00000483344 PRSS12P56730 875 aa9.3□□□□□ -0.92
FNDC3B-210ENST00000483344 OATP04181 439 aa9.29□□□□□ -0.92
FNDC3B-210ENST00000483344 TTLL12Q14166 644 aaPredicted RBP9.29□□□□□ -0.92
FNDC3B-210ENST00000483344 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
FNDC3B-210ENST00000483344 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
FNDC3B-210ENST00000483344 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
FNDC3B-210ENST00000483344 PPP1R3GB7ZBB8 358 aa9.27□□□□□ -0.93
FNDC3B-210ENST00000483344 COL9A1P20849 921 aa9.27□□□□□ -0.93
FNDC3B-210ENST00000483344 FAM161AQ3B820 660 aa9.26□□□□□ -0.93
FNDC3B-210ENST00000483344 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
FNDC3B-210ENST00000483344 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
FNDC3B-210ENST00000483344 ADGRG1Q9Y653 693 aa9.26□□□□□ -0.93
FNDC3B-210ENST00000483344 METTL3Q86U44 580 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-210ENST00000483344 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
FNDC3B-210ENST00000483344 PHOX2BQ99453 314 aa9.25□□□□□ -0.93
FNDC3B-210ENST00000483344 CLCN1P35523 988 aa9.24□□□□□ -0.93
FNDC3B-210ENST00000483344 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 PXYLP1Q8TE99 480 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 GPCPD1Q9NPB8 672 aa9.23□□□□□ -0.93
FNDC3B-210ENST00000483344 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
FNDC3B-210ENST00000483344 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
FNDC3B-210ENST00000483344 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
FNDC3B-210ENST00000483344 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
FNDC3B-210ENST00000483344 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
FNDC3B-210ENST00000483344 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
FNDC3B-210ENST00000483344 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
FNDC3B-210ENST00000483344 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 MS4A1P11836 297 aa9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
FNDC3B-210ENST00000483344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 PSEN2P49810 448 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 PROX2Q3B8N5 592 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 EYA1Q99502 592 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 MYT1LQ9UL68 1186 aa9.17□□□□□ -0.94
FNDC3B-210ENST00000483344 RCCD1A6NED2 376 aa9.16□□□□□ -0.94
FNDC3B-210ENST00000483344 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
FNDC3B-210ENST00000483344 TATDN2Q93075 761 aa9.16□□□□□ -0.94
FNDC3B-210ENST00000483344 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
FNDC3B-210ENST00000483344 PBX2P40425 430 aa9.15□□□□□ -0.94
FNDC3B-210ENST00000483344 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
FNDC3B-210ENST00000483344 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
FNDC3B-210ENST00000483344 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
FNDC3B-210ENST00000483344 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
FNDC3B-210ENST00000483344 DNAJB2P25686 324 aa9.13□□□□□ -0.95
FNDC3B-210ENST00000483344 POTEEQ6S8J3 1075 aa9.13□□□□□ -0.95
FNDC3B-210ENST00000483344 AXIN2Q9Y2T1 843 aa9.13□□□□□ -0.95
FNDC3B-210ENST00000483344 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms