RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
SEC22A-207ENST00000481965 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
SEC22A-207ENST00000481965 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
SEC22A-207ENST00000481965 POTEHQ6S545 545 aa12.57□□□□□ -0.4
SEC22A-207ENST00000481965 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
SEC22A-207ENST00000481965 MAP3K7O43318 606 aa12.56□□□□□ -0.4
SEC22A-207ENST00000481965 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
SEC22A-207ENST00000481965 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
SEC22A-207ENST00000481965 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
SEC22A-207ENST00000481965 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
SEC22A-207ENST00000481965 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
SEC22A-207ENST00000481965 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
SEC22A-207ENST00000481965 CLCN1P35523 988 aa12.5□□□□□ -0.41
SEC22A-207ENST00000481965 GPCPD1Q9NPB8 672 aa12.5□□□□□ -0.41
SEC22A-207ENST00000481965 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
SEC22A-207ENST00000481965 FLIIQ13045 1269 aa12.49□□□□□ -0.41
SEC22A-207ENST00000481965 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
SEC22A-207ENST00000481965 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
SEC22A-207ENST00000481965 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
SEC22A-207ENST00000481965 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
SEC22A-207ENST00000481965 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
SEC22A-207ENST00000481965 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
SEC22A-207ENST00000481965 FOSBP53539 338 aa12.45□□□□□ -0.42
SEC22A-207ENST00000481965 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
SEC22A-207ENST00000481965 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
SEC22A-207ENST00000481965 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
SEC22A-207ENST00000481965 PADI6Q6TGC4 694 aa12.44□□□□□ -0.42
SEC22A-207ENST00000481965 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
SEC22A-207ENST00000481965 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
SEC22A-207ENST00000481965 C6orf132Q5T0Z8 1188 aa12.42□□□□□ -0.42
SEC22A-207ENST00000481965 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
SEC22A-207ENST00000481965 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
SEC22A-207ENST00000481965 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
SEC22A-207ENST00000481965 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
SEC22A-207ENST00000481965 SKIV2LQ15477 1246 aaKnown RBP12.4□□□□□ -0.42
SEC22A-207ENST00000481965 MCM6Q14566 821 aa12.39□□□□□ -0.43
SEC22A-207ENST00000481965 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
SEC22A-207ENST00000481965 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
SEC22A-207ENST00000481965 OATP04181 439 aa12.38□□□□□ -0.43
SEC22A-207ENST00000481965 A6NJR5 290 aa12.37□□□□□ -0.43
SEC22A-207ENST00000481965 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
SEC22A-207ENST00000481965 KHSRPQ92945 711 aaKnown RBP eCLIP12.37□□□□□ -0.436e-7■■■■□ 20.1
SEC22A-207ENST00000481965 ADAM33Q9BZ11 813 aa12.37□□□□□ -0.43
SEC22A-207ENST00000481965 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
SEC22A-207ENST00000481965 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
SEC22A-207ENST00000481965 ARID3AQ99856 593 aa12.36□□□□□ -0.43
SEC22A-207ENST00000481965 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
SEC22A-207ENST00000481965 APBB1O00213 710 aa12.34□□□□□ -0.43
SEC22A-207ENST00000481965 NUDT7P0C024 238 aa12.34□□□□□ -0.43
SEC22A-207ENST00000481965 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
SEC22A-207ENST00000481965 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
SEC22A-207ENST00000481965 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
SEC22A-207ENST00000481965 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC22A-207ENST00000481965 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
SEC22A-207ENST00000481965 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
SEC22A-207ENST00000481965 TRAK2O60296 914 aa12.31□□□□□ -0.44
SEC22A-207ENST00000481965 PRSS12P56730 875 aa12.31□□□□□ -0.44
SEC22A-207ENST00000481965 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
SEC22A-207ENST00000481965 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
SEC22A-207ENST00000481965 GPR153Q6NV75 609 aa12.29□□□□□ -0.44
SEC22A-207ENST00000481965 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
SEC22A-207ENST00000481965 POM121Q96HA1 1249 aa12.27□□□□□ -0.45
SEC22A-207ENST00000481965 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
SEC22A-207ENST00000481965 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
SEC22A-207ENST00000481965 COL9A1P20849 921 aa12.25□□□□□ -0.45
SEC22A-207ENST00000481965 C3orf80F5H4A9 247 aa12.24□□□□□ -0.45
SEC22A-207ENST00000481965 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
SEC22A-207ENST00000481965 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
SEC22A-207ENST00000481965 EYA1Q99502 592 aa12.24□□□□□ -0.45
SEC22A-207ENST00000481965 DOK7Q18PE1 504 aa12.23□□□□□ -0.45
SEC22A-207ENST00000481965 LIMD1Q9UGP4 676 aa12.23□□□□□ -0.45
SEC22A-207ENST00000481965 RCCD1A6NED2 376 aa12.22□□□□□ -0.45
SEC22A-207ENST00000481965 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
SEC22A-207ENST00000481965 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
SEC22A-207ENST00000481965 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
SEC22A-207ENST00000481965 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
SEC22A-207ENST00000481965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
SEC22A-207ENST00000481965 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
SEC22A-207ENST00000481965 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
SEC22A-207ENST00000481965 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
SEC22A-207ENST00000481965 RFC5P40937 340 aa12.2□□□□□ -0.46
SEC22A-207ENST00000481965 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
SEC22A-207ENST00000481965 SNRKQ9NRH2 765 aa12.2□□□□□ -0.46
SEC22A-207ENST00000481965 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
SEC22A-207ENST00000481965 CD46P15529 392 aa12.19□□□□□ -0.46
SEC22A-207ENST00000481965 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
SEC22A-207ENST00000481965 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
SEC22A-207ENST00000481965 PPP2R2DQ66LE6 453 aa12.17□□□□□ -0.46
SEC22A-207ENST00000481965 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
SEC22A-207ENST00000481965 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
SEC22A-207ENST00000481965 BANK1Q8NDB2 785 aa12.16□□□□□ -0.46
SEC22A-207ENST00000481965 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
SEC22A-207ENST00000481965 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
SEC22A-207ENST00000481965 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
SEC22A-207ENST00000481965 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
SEC22A-207ENST00000481965 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
SEC22A-207ENST00000481965 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
SEC22A-207ENST00000481965 NUDT18Q6ZVK8 323 aa12.14□□□□□ -0.47
SEC22A-207ENST00000481965 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
SEC22A-207ENST00000481965 SPTLC1O15269 473 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms