RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CSPP1Q1MSJ5 1256 aa13.11□□□□□ -0.31
PRPF4B-206ENST00000481109 R3HCC1Q9Y3T6 440 aaKnown RBP13.11□□□□□ -0.31
PRPF4B-206ENST00000481109 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 MSNP26038 577 aaKnown RBP13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 E9PSI1 815 aa13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 ZBTB22O15209 634 aa13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 CEP120Q8N960 986 aa13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
PRPF4B-206ENST00000481109 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
PRPF4B-206ENST00000481109 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
PRPF4B-206ENST00000481109 CNTLNQ9NXG0 1405 aa13.09□□□□□ -0.31
PRPF4B-206ENST00000481109 KIF21BO75037 1637 aa13.09□□□□□ -0.31
PRPF4B-206ENST00000481109 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
PRPF4B-206ENST00000481109 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
PRPF4B-206ENST00000481109 MCM4P33991 863 aa13.07□□□□□ -0.32
PRPF4B-206ENST00000481109 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
PRPF4B-206ENST00000481109 PATL2C9JE40 543 aaKnown RBP13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 CARD10Q9BWT7 1032 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 TULP2O00295 520 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
PRPF4B-206ENST00000481109 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
PRPF4B-206ENST00000481109 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
PRPF4B-206ENST00000481109 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
PRPF4B-206ENST00000481109 TRAK2O60296 914 aa13.04□□□□□ -0.32
PRPF4B-206ENST00000481109 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
PRPF4B-206ENST00000481109 KCNJ4P48050 445 aa13.03□□□□□ -0.32
PRPF4B-206ENST00000481109 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
PRPF4B-206ENST00000481109 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
PRPF4B-206ENST00000481109 CLSTN1O94985 981 aa13.03□□□□□ -0.32
PRPF4B-206ENST00000481109 MCM5P33992 734 aa13.03□□□□□ -0.32
PRPF4B-206ENST00000481109 CBX1P83916 185 aa13.02□□□□□ -0.33
PRPF4B-206ENST00000481109 NOL7Q9UMY1 257 aaKnown RBP13.02□□□□□ -0.33
PRPF4B-206ENST00000481109 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 VIRMAQ69YN4 1812 aaKnown RBP13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 GABPB1Q06547 395 aaPredicted RBP13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 PLCD4Q9BRC7 762 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 KIF3AQ9Y496 699 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
PRPF4B-206ENST00000481109 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
PRPF4B-206ENST00000481109 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
PRPF4B-206ENST00000481109 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
PRPF4B-206ENST00000481109 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 HMGB1P09429 215 aaKnown RBP12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 CCNB3Q8WWL7 1395 aa12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 MYRIPQ8NFW9 859 aa12.99□□□□□ -0.33
PRPF4B-206ENST00000481109 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
PRPF4B-206ENST00000481109 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
PRPF4B-206ENST00000481109 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
PRPF4B-206ENST00000481109 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
PRPF4B-206ENST00000481109 ZNF771Q7L3S4 317 aaPredicted RBP12.98□□□□□ -0.33
PRPF4B-206ENST00000481109 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
PRPF4B-206ENST00000481109 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
PRPF4B-206ENST00000481109 FEZ1Q99689 392 aa12.95□□□□□ -0.34
PRPF4B-206ENST00000481109 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
PRPF4B-206ENST00000481109 PRIMPOLQ96LW4 560 aa12.95□□□□□ -0.34
PRPF4B-206ENST00000481109 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
PRPF4B-206ENST00000481109 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 CAPN2P17655 700 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 USP19O94966 1318 aa12.94□□□□□ -0.34
PRPF4B-206ENST00000481109 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 SLKQ9H2G2 1235 aaPredicted RBP12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 CUX1P39880 1505 aa12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 MFAP1P55081 439 aaKnown RBP12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
PRPF4B-206ENST00000481109 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
PRPF4B-206ENST00000481109 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
PRPF4B-206ENST00000481109 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
PRPF4B-206ENST00000481109 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
PRPF4B-206ENST00000481109 ZKSCAN5Q9Y2L8 839 aa12.92□□□□□ -0.34
PRPF4B-206ENST00000481109 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
PRPF4B-206ENST00000481109 BANK1Q8NDB2 785 aa12.91□□□□□ -0.34
PRPF4B-206ENST00000481109 MYCBPQ99417 103 aaPredicted RBP12.91□□□□□ -0.34
PRPF4B-206ENST00000481109 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
PRPF4B-206ENST00000481109 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms