RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
TDP2-203ENST00000478285 DMRTA1Q5VZB9 504 aa13.33□□□□□ -0.28
TDP2-203ENST00000478285 NBR1Q14596 966 aa13.3□□□□□ -0.28
TDP2-203ENST00000478285 TK2O00142 265 aa13.28□□□□□ -0.28
TDP2-203ENST00000478285 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
TDP2-203ENST00000478285 ADGRD1Q6QNK2 874 aa13.28□□□□□ -0.28
TDP2-203ENST00000478285 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
TDP2-203ENST00000478285 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
TDP2-203ENST00000478285 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
TDP2-203ENST00000478285 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
TDP2-203ENST00000478285 PPP1R3GB7ZBB8 358 aa13.24□□□□□ -0.29
TDP2-203ENST00000478285 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
TDP2-203ENST00000478285 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
TDP2-203ENST00000478285 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
TDP2-203ENST00000478285 MAP3K7O43318 606 aa13.21□□□□□ -0.29
TDP2-203ENST00000478285 COL9A1P20849 921 aa13.21□□□□□ -0.29
TDP2-203ENST00000478285 OSBPP22059 807 aa13.21□□□□□ -0.29
TDP2-203ENST00000478285 PRIM1P49642 420 aaKnown RBP13.21□□□□□ -0.29
TDP2-203ENST00000478285 VPS9D1Q9Y2B5 631 aa13.21□□□□□ -0.29
TDP2-203ENST00000478285 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
TDP2-203ENST00000478285 HRO43593 1189 aa13.19□□□□□ -0.3
TDP2-203ENST00000478285 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
TDP2-203ENST00000478285 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
TDP2-203ENST00000478285 RB1CC1Q8TDY2 1594 aa13.18□□□□□ -0.3
TDP2-203ENST00000478285 SEMA3EO15041 775 aa13.16□□□□□ -0.3
TDP2-203ENST00000478285 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
TDP2-203ENST00000478285 NACADO15069 1562 aa13.15□□□□□ -0.3
TDP2-203ENST00000478285 PROX2Q3B8N5 592 aa13.13□□□□□ -0.31
TDP2-203ENST00000478285 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
TDP2-203ENST00000478285 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
TDP2-203ENST00000478285 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
TDP2-203ENST00000478285 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
TDP2-203ENST00000478285 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
TDP2-203ENST00000478285 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
TDP2-203ENST00000478285 RABGEF1Q9UJ41 708 aa13.09□□□□□ -0.31
TDP2-203ENST00000478285 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
TDP2-203ENST00000478285 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
TDP2-203ENST00000478285 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
TDP2-203ENST00000478285 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
TDP2-203ENST00000478285 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
TDP2-203ENST00000478285 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
TDP2-203ENST00000478285 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
TDP2-203ENST00000478285 PRSS12P56730 875 aa13.03□□□□□ -0.32
TDP2-203ENST00000478285 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
TDP2-203ENST00000478285 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
TDP2-203ENST00000478285 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
TDP2-203ENST00000478285 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
TDP2-203ENST00000478285 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
TDP2-203ENST00000478285 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
TDP2-203ENST00000478285 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
TDP2-203ENST00000478285 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
TDP2-203ENST00000478285 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
TDP2-203ENST00000478285 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
TDP2-203ENST00000478285 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
TDP2-203ENST00000478285 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
TDP2-203ENST00000478285 PTGDRQ13258 359 aa12.96□□□□□ -0.33
TDP2-203ENST00000478285 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
TDP2-203ENST00000478285 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
TDP2-203ENST00000478285 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
TDP2-203ENST00000478285 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
TDP2-203ENST00000478285 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
TDP2-203ENST00000478285 WNT2BQ93097 391 aa12.93□□□□□ -0.34
TDP2-203ENST00000478285 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
TDP2-203ENST00000478285 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
TDP2-203ENST00000478285 C3orf80F5H4A9 247 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 FCHSD2O94868 740 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 THSD4Q6ZMP0 1018 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 TATDN2Q93075 761 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
TDP2-203ENST00000478285 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
TDP2-203ENST00000478285 SMAPO00193 183 aa12.89□□□□□ -0.35
TDP2-203ENST00000478285 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
TDP2-203ENST00000478285 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
TDP2-203ENST00000478285 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
TDP2-203ENST00000478285 GPR37O15354 613 aa12.85□□□□□ -0.35
TDP2-203ENST00000478285 HIC1Q14526 733 aa12.85□□□□□ -0.35
TDP2-203ENST00000478285 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
TDP2-203ENST00000478285 PTPN5P54829 565 aa12.84□□□□□ -0.35
TDP2-203ENST00000478285 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
TDP2-203ENST00000478285 BCAMP50895 628 aa12.82□□□□□ -0.36
TDP2-203ENST00000478285 GNPATO15228 680 aa12.8□□□□□ -0.36
TDP2-203ENST00000478285 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
TDP2-203ENST00000478285 EYA1Q99502 592 aa12.8□□□□□ -0.36
TDP2-203ENST00000478285 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
TDP2-203ENST00000478285 ADGRG1Q9Y653 693 aa12.8□□□□□ -0.36
TDP2-203ENST00000478285 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
TDP2-203ENST00000478285 FECHP22830 423 aa12.76□□□□□ -0.37
TDP2-203ENST00000478285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
TDP2-203ENST00000478285 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
TDP2-203ENST00000478285 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
TDP2-203ENST00000478285 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
TDP2-203ENST00000478285 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
TDP2-203ENST00000478285 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
TDP2-203ENST00000478285 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
TDP2-203ENST00000478285 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
TDP2-203ENST00000478285 HPS5Q9UPZ3 1129 aa12.73□□□□□ -0.37
TDP2-203ENST00000478285 DNAJB2P25686 324 aa12.72□□□□□ -0.37
TDP2-203ENST00000478285 LMOD2Q6P5Q4 547 aa12.72□□□□□ -0.37
TDP2-203ENST00000478285 OATP04181 439 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms