RNA–Protein interactions for RNA: ENST00000473282.6

CDK5RAP2-209, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,956 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-209ENST00000473282 TCHPQ9BT92 498 aa10.2□□□□□ -0.78
CDK5RAP2-209ENST00000473282 DNAI2Q9GZS0 605 aa10.2□□□□□ -0.78
CDK5RAP2-209ENST00000473282 TNIKQ9UKE5 1360 aa10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 GOLIM4O00461 696 aa10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 INCENPQ9NQS7 918 aa10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 MYH16Q9H6N6 1097 aa10.19□□□□□ -0.78
CDK5RAP2-209ENST00000473282 GTF2A1P52655 376 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP2-209ENST00000473282 HDAC5Q9UQL6 1122 aa10.18□□□□□ -0.78
CDK5RAP2-209ENST00000473282 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
CDK5RAP2-209ENST00000473282 SEPT14Q6ZU15 432 aa10.18□□□□□ -0.78
CDK5RAP2-209ENST00000473282 NEXNQ0ZGT2 675 aa10.17□□□□□ -0.78
CDK5RAP2-209ENST00000473282 RGL3Q3MIN7 710 aa10.17□□□□□ -0.78
CDK5RAP2-209ENST00000473282 ANAPC15P60006 121 aa10.17□□□□□ -0.78
CDK5RAP2-209ENST00000473282 SENP3-EIF4A1A0A087X0R7 540 aa10.17□□□□□ -0.78
CDK5RAP2-209ENST00000473282 FBXW7Q969H0 707 aa10.17□□□□□ -0.78
CDK5RAP2-209ENST00000473282 CFDP1Q9UEE9 299 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP2-209ENST00000473282 CUX2O14529 1486 aa10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 NPHP1O15259 732 aa10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 TICAM2Q86XR7 235 aa10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 MNS1Q8NEH6 495 aa10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 IPO4Q8TEX9 1081 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 MROH2BQ7Z745 1585 aa10.15□□□□□ -0.78
CDK5RAP2-209ENST00000473282 ERICH4A6NGS2 130 aa10.15□□□□□ -0.79
CDK5RAP2-209ENST00000473282 WDR70Q9NW82 654 aa10.15□□□□□ -0.79
CDK5RAP2-209ENST00000473282 AK7Q96M32 723 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 WIZO95785 1651 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 LIG1P18858 919 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CGNQ9P2M7 1197 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SOGA1O94964 1423 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CCDC97Q96F63 343 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 A0A0G2JS52 829 aa10.14□□□□□ -0.79
CDK5RAP2-209ENST00000473282 FYB1O15117 783 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 GSE1Q14687 1217 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CPSF2Q9P2I0 782 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 GORABQ5T7V8 394 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CDR1P51861 262 aa10.12□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SRPK2P78362 688 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP2-209ENST00000473282 ENOX2Q16206 610 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SIN3AQ96ST3 1273 aa10.12□□□□□ -0.79
CDK5RAP2-209ENST00000473282 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
CDK5RAP2-209ENST00000473282 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SMARCA2P51531 1590 aa10.11□□□□□ -0.79
CDK5RAP2-209ENST00000473282 RALBP1Q15311 655 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 SWAP70Q9UH65 585 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CT47A1Q5JQC4 288 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 RUFY1Q96T51 708 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CCNB3Q8WWL7 1395 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CALCOCO1Q9P1Z2 691 aa10.1□□□□□ -0.79
CDK5RAP2-209ENST00000473282 MCCP23508 829 aa10.09□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
CDK5RAP2-209ENST00000473282 HSCBQ8IWL3 235 aa10.09□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CARD11Q9BXL7 1154 aa10.09□□□□□ -0.79
CDK5RAP2-209ENST00000473282 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP2-209ENST00000473282 FANCIQ9NVI1 1328 aa10.08□□□□□ -0.8
CDK5RAP2-209ENST00000473282 IL27Q8NEV9 243 aa10.08□□□□□ -0.8
CDK5RAP2-209ENST00000473282 WDR66Q8TBY9 1149 aa10.08□□□□□ -0.8
CDK5RAP2-209ENST00000473282 KIF3AQ9Y496 699 aa10.08□□□□□ -0.8
CDK5RAP2-209ENST00000473282 CREBRFQ8IUR6 639 aa10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 ARGLU1Q9NWB6 273 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 RNF168Q8IYW5 571 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 MKL2Q9ULH7 1088 aa10.07□□□□□ -0.8
CDK5RAP2-209ENST00000473282 PIK3R5Q8WYR1 880 aa10.06□□□□□ -0.8
CDK5RAP2-209ENST00000473282 KNSTRNQ9Y448 316 aa10.06□□□□□ -0.8
CDK5RAP2-209ENST00000473282 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP2-209ENST00000473282 GZF1Q9H116 711 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 BTN2A1Q7KYR7 527 aa10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 TRIM63Q969Q1 353 aa10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 GBP4Q96PP9 640 aa10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 GBP2P32456 591 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 ZHX1Q9UKY1 873 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 ARHGAP35Q9NRY4 1499 aa10.05□□□□□ -0.8
CDK5RAP2-209ENST00000473282 SEPT6Q14141 434 aa10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 SLMAPQ14BN4 828 aa10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 CFAP53Q96M91 514 aa10.04□□□□□ -0.8
CDK5RAP2-209ENST00000473282 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
CDK5RAP2-209ENST00000473282 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
CDK5RAP2-209ENST00000473282 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
CDK5RAP2-209ENST00000473282 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-209ENST00000473282 PDCL3Q9H2J4 239 aa10.03□□□□□ -0.8
CDK5RAP2-209ENST00000473282 CTR9Q6PD62 1173 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms